RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	TRPV4	Q9HBA0	871 aa		12.23	□□□□□ -0.45
PTPN7-204	ENST00000462815	TRPV5	Q9NQA5	729 aa		12.23	□□□□□ -0.45
PTPN7-204	ENST00000462815	TOPORS	Q9NS56	1045 aa	Predicted RBP	12.23	□□□□□ -0.45
PTPN7-204	ENST00000462815	SLC38A7	Q9NVC3	462 aa		12.23	□□□□□ -0.45
PTPN7-204	ENST00000462815	ZSCAN32	Q9NX65	697 aa		12.23	□□□□□ -0.45
PTPN7-204	ENST00000462815	CEP72	Q9P209	647 aa		12.23	□□□□□ -0.45
PTPN7-204	ENST00000462815	LRWD1	Q9UFC0	647 aa		12.23	□□□□□ -0.45
PTPN7-204	ENST00000462815	EPG5	Q9HCE0	2579 aa		12.23	□□□□□ -0.45
PTPN7-204	ENST00000462815	CIT	O14578	2027 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	RPL9	P32969	192 aa	Known RBP	12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	AARS	P49588	968 aa	Known RBP eCLIP	12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	ADCY1	Q08828	1119 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	GAS6	Q14393	721 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	GRM2	Q14416	872 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	SAFB	Q15424	915 aa	Known RBP eCLIP	12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	RSPO4	Q2I0M5	234 aa	Predicted RBP	12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	TPGS2	Q68CL5	300 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	MPZL3	Q6UWV2	235 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	ZNF852	Q6ZMS4	543 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	HS6ST3	Q8IZP7	471 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	SNX29	Q8TEQ0	813 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	DDX12P	Q92771	950 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	KCNN1	Q92952	543 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	RSPRY1	Q96DX4	576 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	NELL2	Q99435	816 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	KIF2C	Q99661	725 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	CORO1B	Q9BR76	489 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	CHRD	Q9H2X0	955 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	CRISPLD1	Q9H336	500 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	PARD6A	Q9NPB6	346 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	TUBGCP4	Q9UGJ1	667 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	LIMCH1	Q9UPQ0	1083 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	SMG5	Q9UPR3	1016 aa	Known RBP	12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	PCDHB6	Q9Y5E3	794 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	TSC2	P49815	1807 aa		12.22	□□□□□ -0.45
PTPN7-204	ENST00000462815	CCDC169	A6NNP5	214 aa		12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815		M0QZQ0	153 aa		12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	FAM189A1	O60320	539 aa		12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	LRG1	P02750	347 aa		12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	GUCY2C	P25092	1073 aa		12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	CDC25A	P30304	524 aa		12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	YARS	P54577	528 aa	Known RBP	12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	PTGDR	Q13258	359 aa		12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	ZBTB6	Q15916	424 aa		12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	HYI	Q5T013	277 aa		12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	RNF19B	Q6ZMZ0	732 aa		12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	TMC8	Q8IU68	726 aa		12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	TMEM161B	Q8NDZ6	487 aa		12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	TBC1D32	Q96NH3	1257 aa		12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	ACAP3	Q96P50	834 aa		12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	PNMA5	Q96PV4	448 aa		12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	MKNK1	Q9BUB5	465 aa		12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	DNAJC25	Q9H1X3	360 aa		12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	CYP4F11	Q9HBI6	524 aa		12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	ZNF334	Q9HCZ1	680 aa	Predicted RBP	12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815	AFF4	Q9UHB7	1163 aa	Known RBP	12.21	□□□□□ -0.45
PTPN7-204	ENST00000462815		H7C4K7	107 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	PRRG1	O14668	218 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	SLC16A4	O15374	487 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	TOM1L1	O75674	476 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	MAPT	P10636	758 aa	Known RBP	12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	GJA1	P17302	382 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	LRPAP1	P30533	357 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	PRPH	P41219	470 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	VIPR2	P41587	438 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	MCL1	Q07820	350 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	TWF1	Q12792	350 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	DMP1	Q13316	513 aa	Predicted RBP	12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	CTXN3	Q4LDR2	81 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	SEZ6	Q53EL9	994 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	PDZD4	Q76G19	769 aa	Predicted RBP	12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	SHKBP1	Q8TBC3	707 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	SPIRE2	Q8WWL2	714 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	SMARCD2	Q92925	531 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	DRC1	Q96MC2	740 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	C17orf75	Q9HAS0	396 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	ZFP14	Q9HCL3	533 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	KMT5A	Q9NQR1	393 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	MAFF	Q9ULX9	164 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	PCDHB8	Q9UN66	801 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	RBM19	Q9Y4C8	960 aa	Known RBP	12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	YIPF1	Q9Y548	306 aa		12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	KIF26A	Q9ULI4	1882 aa	Predicted RBP	12.2	□□□□□ -0.46
PTPN7-204	ENST00000462815	SPTBN2	O15020	2390 aa		12.19	□□□□□ -0.46
PTPN7-204	ENST00000462815	CFAP47	Q6ZTR5	3102 aa		12.19	□□□□□ -0.46
PTPN7-204	ENST00000462815	TTC26	A0AVF1	554 aa		12.19	□□□□□ -0.46
PTPN7-204	ENST00000462815	SFI1	A8K8P3	1242 aa		12.19	□□□□□ -0.46
PTPN7-204	ENST00000462815	ZNF197	O14709	1029 aa		12.19	□□□□□ -0.46
PTPN7-204	ENST00000462815	NCAM2	O15394	837 aa		12.19	□□□□□ -0.46
PTPN7-204	ENST00000462815	OAZ2	O95190	189 aa		12.19	□□□□□ -0.46
PTPN7-204	ENST00000462815	CXCL8	P10145	99 aa		12.19	□□□□□ -0.46
PTPN7-204	ENST00000462815	CHRNB1	P11230	501 aa		12.19	□□□□□ -0.46
PTPN7-204	ENST00000462815	PSMC3	P17980	439 aa		12.19	□□□□□ -0.46
PTPN7-204	ENST00000462815	ELF1	P32519	619 aa		12.19	□□□□□ -0.46
PTPN7-204	ENST00000462815	ATXN1	P54253	815 aa	Known RBP	12.19	□□□□□ -0.46
PTPN7-204	ENST00000462815	ARPP19	P56211	112 aa		12.19	□□□□□ -0.46
PTPN7-204	ENST00000462815	HMGN5	P82970	282 aa	Known RBP	12.19	□□□□□ -0.46
PTPN7-204	ENST00000462815	NOLC1	Q14978	699 aa	Known RBP eCLIP	12.19	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms