RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 FBXW11Q9UKB1 542 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 CPSF3Q9UKF6 684 aaKnown RBP16.72■□□□□ 0.27
VARS-219ENST00000461328 UBQLN1Q9UMX0 589 aaKnown RBP16.72■□□□□ 0.27
VARS-219ENST00000461328 SORCS3Q9UPU3 1222 aa16.72■□□□□ 0.27
VARS-219ENST00000461328 CLUHO75153 1309 aa16.71■□□□□ 0.27
VARS-219ENST00000461328 C2orf16Q68DN1 1984 aa16.71■□□□□ 0.27
VARS-219ENST00000461328 A0A1B0GVL5 298 aa16.71■□□□□ 0.27
VARS-219ENST00000461328 TTC26A0AVF1 554 aa16.71■□□□□ 0.27
VARS-219ENST00000461328 FAM189A1O60320 539 aa16.71■□□□□ 0.27
VARS-219ENST00000461328 PRPF6O94906 941 aaKnown RBP16.71■□□□□ 0.27
VARS-219ENST00000461328 ASGR2P07307 311 aa16.71■□□□□ 0.27
VARS-219ENST00000461328 NUCB2P80303 420 aa16.71■□□□□ 0.27
VARS-219ENST00000461328 RAB33AQ14088 237 aa16.71■□□□□ 0.27
VARS-219ENST00000461328 FAM26FQ5R3K3 315 aa16.71■□□□□ 0.27
VARS-219ENST00000461328 PPM1LQ5SGD2 360 aa16.71■□□□□ 0.27
VARS-219ENST00000461328 HPS3Q969F9 1004 aa16.71■□□□□ 0.27
VARS-219ENST00000461328 PBXIP1Q96AQ6 731 aa16.71■□□□□ 0.27
VARS-219ENST00000461328 C7orf25Q9BPX7 421 aa16.71■□□□□ 0.27
VARS-219ENST00000461328 STRA6Q9BX79 667 aa16.71■□□□□ 0.27
VARS-219ENST00000461328 TMEM206Q9H813 350 aa16.71■□□□□ 0.27
VARS-219ENST00000461328 SERTAD1Q9UHV2 236 aa16.71■□□□□ 0.27
VARS-219ENST00000461328 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.71■□□□□ 0.27
VARS-219ENST00000461328 BACE2Q9Y5Z0 518 aa16.71■□□□□ 0.27
VARS-219ENST00000461328 CDY1Q9Y6F8 540 aa16.71■□□□□ 0.27
VARS-219ENST00000461328 VWA8A3KMH1 1905 aa16.7■□□□□ 0.26
VARS-219ENST00000461328 SYN3O14994 580 aa16.7■□□□□ 0.26
VARS-219ENST00000461328 C8AP07357 584 aa16.7■□□□□ 0.26
VARS-219ENST00000461328 CMA1P23946 247 aa16.7■□□□□ 0.26
VARS-219ENST00000461328 CASP1P29466 404 aa16.7■□□□□ 0.26
VARS-219ENST00000461328 GBP2P32456 591 aaPredicted RBP16.7■□□□□ 0.26
VARS-219ENST00000461328 TMEM132DQ14C87 1099 aa16.7■□□□□ 0.26
VARS-219ENST00000461328 VARS2Q5ST30 1063 aaKnown RBP16.7■□□□□ 0.26
VARS-219ENST00000461328 ARMCX5Q6P1M9 558 aa16.7■□□□□ 0.26
VARS-219ENST00000461328 RSPO2Q6UXX9 243 aaPredicted RBP16.7■□□□□ 0.26
VARS-219ENST00000461328 UNC13DQ70J99 1090 aa16.7■□□□□ 0.26
VARS-219ENST00000461328 BMP8AQ7Z5Y6 402 aa16.7■□□□□ 0.26
VARS-219ENST00000461328 CD302Q8IX05 232 aa16.7■□□□□ 0.26
VARS-219ENST00000461328 UBALD2Q8IYN6 164 aa16.7■□□□□ 0.26
VARS-219ENST00000461328 GRAMD1CQ8IYS0 662 aa16.7■□□□□ 0.26
VARS-219ENST00000461328 BEST2Q8NFU1 509 aa16.7■□□□□ 0.26
VARS-219ENST00000461328 SAAL1Q96ER3 474 aa16.7■□□□□ 0.26
VARS-219ENST00000461328 FAM213AQ9BRX8 229 aa16.7■□□□□ 0.26
VARS-219ENST00000461328 GDPD2Q9HCC8 539 aa16.7■□□□□ 0.26
VARS-219ENST00000461328 STYXL1Q9Y6J8 313 aa16.7■□□□□ 0.26
VARS-219ENST00000461328 TRIOO75962 3097 aa16.69■□□□□ 0.26
VARS-219ENST00000461328 PAPLNO95428 1278 aa16.69■□□□□ 0.26
VARS-219ENST00000461328 NFICP08651 508 aa16.69■□□□□ 0.26
VARS-219ENST00000461328 HNRNPA1P09651 372 aaKnown RBP eCLIP16.69■□□□□ 0.26
VARS-219ENST00000461328 SLFN14P0C7P3 912 aa16.69■□□□□ 0.26
VARS-219ENST00000461328 GUCY2FP51841 1108 aa16.69■□□□□ 0.26
VARS-219ENST00000461328 JADE1Q6IE81 842 aa16.69■□□□□ 0.26
VARS-219ENST00000461328 CNNM4Q6P4Q7 775 aa16.69■□□□□ 0.26
VARS-219ENST00000461328 GET4Q7L5D6 327 aaPredicted RBP16.69■□□□□ 0.26
VARS-219ENST00000461328 SUGP1Q8IWZ8 645 aaKnown RBP16.69■□□□□ 0.26
VARS-219ENST00000461328 FSIP1Q8NA03 581 aa16.69■□□□□ 0.26
VARS-219ENST00000461328 SLC7A14Q8TBB6 771 aa16.69■□□□□ 0.26
VARS-219ENST00000461328 SUSD3Q96L08 255 aa16.69■□□□□ 0.26
VARS-219ENST00000461328 TSPAN18Q96SJ8 248 aa16.69■□□□□ 0.26
VARS-219ENST00000461328 POLIQ9UNA4 740 aa16.69■□□□□ 0.26
VARS-219ENST00000461328 ARIH1Q9Y4X5 557 aaPredicted RBP16.69■□□□□ 0.26
VARS-219ENST00000461328 TECTAO75443 2155 aa16.69■□□□□ 0.26
VARS-219ENST00000461328 PDCD11Q14690 1871 aaKnown RBP16.69■□□□□ 0.26
VARS-219ENST00000461328 MTCL1Q9Y4B5 1905 aaKnown RBP16.68■□□□□ 0.26
VARS-219ENST00000461328 H7C4K7 107 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 EIF3DO15371 548 aaKnown RBP eCLIP16.68■□□□□ 0.26
VARS-219ENST00000461328 CCL16O15467 120 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 ACTN4O43707 911 aaKnown RBP16.68■□□□□ 0.26
VARS-219ENST00000461328 XYLBO75191 536 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 CYP3A5P20815 502 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 GARTP22102 1010 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 ADSSP30520 456 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 LRPAP1P30533 357 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 HOXA9P31269 272 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 SYKP43405 635 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 ARPP19P56211 112 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 CUL4BQ13620 913 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 ZBTB6Q15916 424 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 TMEM130Q8N3G9 435 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 GLIS3Q8NEA6 775 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 APPL2Q8NEU8 664 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 FAM122AQ96E09 287 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 ASIC4Q96FT7 647 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 SMOC2Q9H3U7 446 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 EXOC1Q9NV70 894 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 USP25Q9UHP3 1055 aa16.68■□□□□ 0.26
VARS-219ENST00000461328 GOLGA8IPA6NC78 632 aa16.67■□□□□ 0.26
VARS-219ENST00000461328 GOLGA6L4A6NEF3 574 aa16.67■□□□□ 0.26
VARS-219ENST00000461328 GOLGA8JA6NMD2 632 aa16.67■□□□□ 0.26
VARS-219ENST00000461328 N4BP1O75113 896 aaKnown RBP16.67■□□□□ 0.26
VARS-219ENST00000461328 IL18RAPO95256 599 aa16.67■□□□□ 0.26
VARS-219ENST00000461328 LDHAP00338 332 aaKnown RBP16.67■□□□□ 0.26
VARS-219ENST00000461328 UVSSAQ2YD98 709 aa16.67■□□□□ 0.26
VARS-219ENST00000461328 CTXN3Q4LDR2 81 aa16.67■□□□□ 0.26
VARS-219ENST00000461328 SLC8B1Q6J4K2 584 aa16.67■□□□□ 0.26
VARS-219ENST00000461328 GRASPQ7Z6J2 395 aaPredicted RBP16.67■□□□□ 0.26
VARS-219ENST00000461328 NELFCDQ8IXH7 590 aa16.67■□□□□ 0.26
VARS-219ENST00000461328 FBXL6Q8N531 539 aa16.67■□□□□ 0.26
VARS-219ENST00000461328 PAGE5Q96GU1 130 aa16.67■□□□□ 0.26
VARS-219ENST00000461328 MYADMQ96S97 322 aa16.67■□□□□ 0.26
VARS-219ENST00000461328 CBWD1Q9BRT8 395 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms