RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 GARTP22102 1010 aa24.96■■□□□ 1.59
PTPN4-208ENST00000460289 TMEM132DQ14C87 1099 aa24.96■■□□□ 1.59
PTPN4-208ENST00000460289 UVSSAQ2YD98 709 aa24.96■■□□□ 1.59
PTPN4-208ENST00000460289 JADE1Q6IE81 842 aa24.96■■□□□ 1.59
PTPN4-208ENST00000460289 RTL10Q7L3V2 364 aa24.96■■□□□ 1.59
PTPN4-208ENST00000460289 ZDHHC14Q8IZN3 488 aa24.96■■□□□ 1.59
PTPN4-208ENST00000460289 FEZF2Q8TBJ5 459 aa24.96■■□□□ 1.59
PTPN4-208ENST00000460289 IKZF4Q9H2S9 585 aa24.96■■□□□ 1.59
PTPN4-208ENST00000460289 WDR6Q9NNW5 1121 aaKnown RBP24.96■■□□□ 1.59
PTPN4-208ENST00000460289 C2CD2Q9Y426 696 aa24.96■■□□□ 1.59
PTPN4-208ENST00000460289 PLXNA3P51805 1871 aa24.96■■□□□ 1.59
PTPN4-208ENST00000460289 PRR33A8MZF0 331 aa24.95■■□□□ 1.58
PTPN4-208ENST00000460289 PRPF6O94906 941 aaKnown RBP24.95■■□□□ 1.58
PTPN4-208ENST00000460289 HNRNPA1P09651 372 aaKnown RBP eCLIP24.95■■□□□ 1.58
PTPN4-208ENST00000460289 PAX3P23760 479 aa24.95■■□□□ 1.58
PTPN4-208ENST00000460289 MRPL58Q14197 206 aaKnown RBP24.95■■□□□ 1.58
PTPN4-208ENST00000460289 SLC8B1Q6J4K2 584 aa24.95■■□□□ 1.58
PTPN4-208ENST00000460289 CEP57L1Q8IYX8 460 aa24.95■■□□□ 1.58
PTPN4-208ENST00000460289 LEO1Q8WVC0 666 aaPredicted RBP24.95■■□□□ 1.58
PTPN4-208ENST00000460289 ZNF707Q96C28 371 aaPredicted RBP24.95■■□□□ 1.58
PTPN4-208ENST00000460289 PCDHB8Q9UN66 801 aa24.95■■□□□ 1.58
PTPN4-208ENST00000460289 VWA8A3KMH1 1905 aa24.94■■□□□ 1.58
PTPN4-208ENST00000460289 FAM86C2PA6NEL3 165 aa24.94■■□□□ 1.58
PTPN4-208ENST00000460289 IL18RAPO95256 599 aa24.94■■□□□ 1.58
PTPN4-208ENST00000460289 CMA1P23946 247 aa24.94■■□□□ 1.58
PTPN4-208ENST00000460289 PPM1LQ5SGD2 360 aa24.94■■□□□ 1.58
PTPN4-208ENST00000460289 CRELD2Q6UXH1 353 aaPredicted RBP24.94■■□□□ 1.58
PTPN4-208ENST00000460289 RSPO2Q6UXX9 243 aaPredicted RBP24.94■■□□□ 1.58
PTPN4-208ENST00000460289 ZNF461Q8TAF7 563 aa24.94■■□□□ 1.58
PTPN4-208ENST00000460289 FGFBP2Q9BYJ0 223 aa24.94■■□□□ 1.58
PTPN4-208ENST00000460289 SCAND2PQ9GZW5 306 aaPredicted RBP24.94■■□□□ 1.58
PTPN4-208ENST00000460289 MTCL1Q9Y4B5 1905 aaKnown RBP24.94■■□□□ 1.58
PTPN4-208ENST00000460289 M0QZQ0 153 aa24.93■■□□□ 1.58
PTPN4-208ENST00000460289 TBC1D4O60343 1298 aa24.93■■□□□ 1.58
PTPN4-208ENST00000460289 C8AP07357 584 aa24.93■■□□□ 1.58
PTPN4-208ENST00000460289 NFICP08651 508 aa24.93■■□□□ 1.58
PTPN4-208ENST00000460289 HOXA9P31269 272 aa24.93■■□□□ 1.58
PTPN4-208ENST00000460289 ZXDAP98168 799 aa24.93■■□□□ 1.58
PTPN4-208ENST00000460289 PTPN21Q16825 1174 aa24.93■■□□□ 1.58
PTPN4-208ENST00000460289 UNC13DQ70J99 1090 aa24.93■■□□□ 1.58
PTPN4-208ENST00000460289 NT5DC4Q86YG4 428 aa24.93■■□□□ 1.58
PTPN4-208ENST00000460289 FAM213AQ9BRX8 229 aa24.93■■□□□ 1.58
PTPN4-208ENST00000460289 PDCD11Q14690 1871 aaKnown RBP24.93■■□□□ 1.58
PTPN4-208ENST00000460289 PVALEFA0A1B0GWK0 134 aa24.92■■□□□ 1.58
PTPN4-208ENST00000460289 KIAA0391O15091 583 aaKnown RBP24.92■■□□□ 1.58
PTPN4-208ENST00000460289 SLFN14P0C7P3 912 aa24.92■■□□□ 1.58
PTPN4-208ENST00000460289 AARSP49588 968 aaKnown RBP eCLIP24.92■■□□□ 1.58
PTPN4-208ENST00000460289 GUCY2FP51841 1108 aa24.92■■□□□ 1.58
PTPN4-208ENST00000460289 CTXN3Q4LDR2 81 aa24.92■■□□□ 1.58
PTPN4-208ENST00000460289 FAM26FQ5R3K3 315 aa24.92■■□□□ 1.58
PTPN4-208ENST00000460289 ZNF280DQ6N043 979 aa24.92■■□□□ 1.58
PTPN4-208ENST00000460289 DSTYKQ6XUX3 929 aa24.92■■□□□ 1.58
PTPN4-208ENST00000460289 HPS3Q969F9 1004 aa24.92■■□□□ 1.58
PTPN4-208ENST00000460289 OXCT2Q9BYC2 517 aaPredicted RBP24.92■■□□□ 1.58
PTPN4-208ENST00000460289 LIMD1Q9UGP4 676 aa24.92■■□□□ 1.58
PTPN4-208ENST00000460289 FBXL5Q9UKA1 691 aa24.92■■□□□ 1.58
PTPN4-208ENST00000460289 CLUHO75153 1309 aa24.91■■□□□ 1.58
PTPN4-208ENST00000460289 EIF3DO15371 548 aaKnown RBP eCLIP24.91■■□□□ 1.58
PTPN4-208ENST00000460289 XYLBO75191 536 aa24.91■■□□□ 1.58
PTPN4-208ENST00000460289 ABLIM3O94929 683 aa24.91■■□□□ 1.58
PTPN4-208ENST00000460289 COL9A1P20849 921 aa24.91■■□□□ 1.58
PTPN4-208ENST00000460289 ELF1P32519 619 aa24.91■■□□□ 1.58
PTPN4-208ENST00000460289 AFMP43652 599 aa24.91■■□□□ 1.58
PTPN4-208ENST00000460289 ROR1Q01973 937 aa24.91■■□□□ 1.58
PTPN4-208ENST00000460289 C9orf57Q5W0N0 161 aa24.91■■□□□ 1.58
PTPN4-208ENST00000460289 ARMCX5Q6P1M9 558 aa24.91■■□□□ 1.58
PTPN4-208ENST00000460289 SLC7A14Q8TBB6 771 aa24.91■■□□□ 1.58
PTPN4-208ENST00000460289 ZNF507Q8TCN5 953 aa24.91■■□□□ 1.58
PTPN4-208ENST00000460289 SAAL1Q96ER3 474 aa24.91■■□□□ 1.58
PTPN4-208ENST00000460289 BLZF1Q9H2G9 400 aa24.91■■□□□ 1.58
PTPN4-208ENST00000460289 USP25Q9UHP3 1055 aa24.91■■□□□ 1.58
PTPN4-208ENST00000460289 PIRO00625 290 aa24.9■■□□□ 1.58
PTPN4-208ENST00000460289 EXTL3O43909 919 aa24.9■■□□□ 1.58
PTPN4-208ENST00000460289 OAZ2O95190 189 aa24.9■■□□□ 1.58
PTPN4-208ENST00000460289 POU2F2P09086 479 aa24.9■■□□□ 1.58
PTPN4-208ENST00000460289 ARPP19P56211 112 aa24.9■■□□□ 1.58
PTPN4-208ENST00000460289 LILRA4P59901 499 aa24.9■■□□□ 1.58
PTPN4-208ENST00000460289 YWHAHQ04917 246 aaPredicted RBP24.9■■□□□ 1.58
PTPN4-208ENST00000460289 TPGS2Q68CL5 300 aa24.9■■□□□ 1.58
PTPN4-208ENST00000460289 TRIM67Q6ZTA4 783 aa24.9■■□□□ 1.58
PTPN4-208ENST00000460289 USP37Q86T82 979 aa24.9■■□□□ 1.58
PTPN4-208ENST00000460289 TMEM130Q8N3G9 435 aa24.9■■□□□ 1.58
PTPN4-208ENST00000460289 CBWD1Q9BRT8 395 aa24.9■■□□□ 1.58
PTPN4-208ENST00000460289 DPP3Q9NY33 737 aa24.9■■□□□ 1.58
PTPN4-208ENST00000460289 SERTAD1Q9UHV2 236 aa24.9■■□□□ 1.58
PTPN4-208ENST00000460289 SORCS3Q9UPU3 1222 aa24.9■■□□□ 1.58
PTPN4-208ENST00000460289 A0A1B0GVL5 298 aa24.89■■□□□ 1.58
PTPN4-208ENST00000460289 ANO9A1A5B4 782 aa24.89■■□□□ 1.58
PTPN4-208ENST00000460289 ARHGEF37A1IGU5 675 aa24.89■■□□□ 1.58
PTPN4-208ENST00000460289 ATF2P15336 505 aa24.89■■□□□ 1.58
PTPN4-208ENST00000460289 PFKFB1P16118 471 aa24.89■■□□□ 1.58
PTPN4-208ENST00000460289 GBP2P32456 591 aaPredicted RBP24.89■■□□□ 1.58
PTPN4-208ENST00000460289 EHHADHQ08426 723 aa24.89■■□□□ 1.58
PTPN4-208ENST00000460289 MTMR3Q13615 1198 aa24.89■■□□□ 1.58
PTPN4-208ENST00000460289 CUL4BQ13620 913 aa24.89■■□□□ 1.58
PTPN4-208ENST00000460289 EPM2AIP1Q7L775 607 aaPredicted RBP24.89■■□□□ 1.58
PTPN4-208ENST00000460289 BRSK2Q8IWQ3 736 aa24.89■■□□□ 1.58
PTPN4-208ENST00000460289 UBALD2Q8IYN6 164 aa24.89■■□□□ 1.58
PTPN4-208ENST00000460289 GPD1LQ8N335 351 aa24.89■■□□□ 1.58
PTPN4-208ENST00000460289 GLIS3Q8NEA6 775 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms