RNA–Protein interactions for RNA: ENST00000446916.2

ATRN-202, Transcript of attractin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATRN, Length 3,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRN-202ENST00000446916 KLF6Q99612 283 aaPredicted RBP15.37■□□□□ 0.05
ATRN-202ENST00000446916 MMTAG2Q9BU76 263 aaKnown RBP15.37■□□□□ 0.05
ATRN-202ENST00000446916 USP15Q9Y4E8 981 aaPredicted RBP15.37■□□□□ 0.05
ATRN-202ENST00000446916 USP2O75604 605 aaPredicted RBP15.37■□□□□ 0.05
ATRN-202ENST00000446916 DGAT1O75907 488 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 SMNDC1O75940 238 aaKnown RBP eCLIP15.37■□□□□ 0.05
ATRN-202ENST00000446916 SLC25A27O95847 323 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 LINGO3P0C6S8 592 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 TUBP50607 506 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 XRCC4Q13426 336 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 EMC2Q15006 297 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 CATSPERGQ6ZRH7 1159 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 YTHDF3Q7Z739 585 aaKnown RBP15.37■□□□□ 0.05
ATRN-202ENST00000446916 MAIP1Q8WWC4 291 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 PPP2R3BQ9Y5P8 575 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.37■□□□□ 0.05
ATRN-202ENST00000446916 TISP43B9A030 160 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 MX2P20592 715 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 DYNLT1P63172 113 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.37■□□□□ 0.05
ATRN-202ENST00000446916 MSL3Q8N5Y2 521 aaKnown RBP15.37■□□□□ 0.05
ATRN-202ENST00000446916 SCFD2Q8WU76 684 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 SCFD1Q8WVM8 642 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 NMRK2Q9NPI5 230 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 LNPEPQ9UIQ6 1025 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 MAGED2Q9UNF1 606 aaPredicted RBP15.37■□□□□ 0.05
ATRN-202ENST00000446916 PFASO15067 1338 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 NWD2Q9ULI1 1742 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 GRAMD1BQ3KR37 738 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 ACBD5Q5T8D3 534 aaPredicted RBP15.37■□□□□ 0.05
ATRN-202ENST00000446916 TTI2Q6NXR4 508 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 USP50Q70EL3 339 aaPredicted RBP15.37■□□□□ 0.05
ATRN-202ENST00000446916 CBWD1Q9BRT8 395 aa15.37■□□□□ 0.05
ATRN-202ENST00000446916 POLR3CQ9BUI4 534 aaPredicted RBP15.37■□□□□ 0.05
ATRN-202ENST00000446916 SUCLA2Q9P2R7 463 aaPredicted RBP15.37■□□□□ 0.05
ATRN-202ENST00000446916 SPEF2Q9C093 1822 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 A0A087X0T9 212 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 MGRN1O60291 552 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 ZNF189O75820 626 aaPredicted RBP15.36■□□□□ 0.05
ATRN-202ENST00000446916 CBX6O95503 412 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 FAM228BP0C875 321 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 EPHB1P54762 984 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 PCNX4Q63HM2 1172 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 GLYCTKQ8IVS8 523 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 C9orf72Q96LT7 481 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 HSPBP1Q9NZL4 362 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 COL20A1Q9P218 1284 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 SEL1LQ9UBV2 794 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 FAF1Q9UNN5 650 aaPredicted RBP15.36■□□□□ 0.05
ATRN-202ENST00000446916 ZNF148Q9UQR1 794 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 CFAP73A6NFT4 308 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 GLTPD2A6NH11 291 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 EPHB2P29323 1055 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 PBX1P40424 430 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 CASP5P51878 434 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 GTF2A2P52657 109 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 PMS2P54278 862 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 Q4G0T1 1027 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 SPATA21Q7Z572 469 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 C4orf32Q8N8J7 132 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 MAML1Q92585 1016 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 CAVIN3Q969G5 261 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 SKIP12755 728 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 ZNF280AP59817 542 aaPredicted RBP15.36■□□□□ 0.05
ATRN-202ENST00000446916 CWF19L1Q69YN2 538 aaKnown RBP15.36■□□□□ 0.05
ATRN-202ENST00000446916 LCA5Q86VQ0 697 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 C1orf54Q8WWF1 131 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 DNAJC7Q99615 494 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 SEMA4AQ9H3S1 761 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 GINM1Q9NU53 330 aa15.36■□□□□ 0.05
ATRN-202ENST00000446916 AGO2Q9UKV8 859 aaKnown RBP15.36■□□□□ 0.05
ATRN-202ENST00000446916 PITPNM2Q9BZ72 1349 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 TMEM120BA0PK00 339 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 PDXKO00764 312 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 MFAP3P55082 362 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 PTK2Q05397 1052 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 PPATQ06203 517 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 DNAJC3Q13217 504 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 DRAP1Q14919 205 aaPredicted RBP15.35■□□□□ 0.05
ATRN-202ENST00000446916 KLHL23Q8NBE8 558 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 CCDC110Q8TBZ0 833 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 PI4K2AQ9BTU6 479 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 DNAI2Q9GZS0 605 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 DDX18Q9NVP1 670 aaKnown RBP15.35■□□□□ 0.05
ATRN-202ENST00000446916 CYP39A1Q9NYL5 469 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 RBAKQ9NYW8 714 aaPredicted RBP15.35■□□□□ 0.05
ATRN-202ENST00000446916 NKX1-2Q9UD57 310 aaPredicted RBP15.35■□□□□ 0.05
ATRN-202ENST00000446916 CORO1CQ9ULV4 474 aaPredicted RBP15.35■□□□□ 0.05
ATRN-202ENST00000446916 MYH3P11055 1940 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 ITIH6Q6UXX5 1313 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 SYNJ2BP-COX16A0A087WUM0 186 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 TPD52L2O43399 206 aaKnown RBP15.35■□□□□ 0.05
ATRN-202ENST00000446916 PLS3P13797 630 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 CREB1P16220 341 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 KCNMA1Q12791 1236 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 P3H1Q32P28 736 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 USP38Q8NB14 1042 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 FAM167AQ96KS9 214 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 SYT15Q9BQS2 421 aa15.35■□□□□ 0.05
ATRN-202ENST00000446916 KDM4CQ9H3R0 1056 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms