RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 GPD1LQ8N335 351 aa11.35□□□□□ -0.59
MCF2L-216ENST00000439475 NOC3LQ8WTT2 800 aaKnown RBP11.35□□□□□ -0.59
MCF2L-216ENST00000439475 PAGE5Q96GU1 130 aa11.35□□□□□ -0.59
MCF2L-216ENST00000439475 FAM213AQ9BRX8 229 aa11.35□□□□□ -0.59
MCF2L-216ENST00000439475 RHOBTB2Q9BYZ6 727 aa11.35□□□□□ -0.59
MCF2L-216ENST00000439475 ZDHHC7Q9NXF8 308 aa11.35□□□□□ -0.59
MCF2L-216ENST00000439475 CGNQ9P2M7 1197 aaKnown RBP11.35□□□□□ -0.59
MCF2L-216ENST00000439475 MTRRQ9UBK8 725 aa11.35□□□□□ -0.59
MCF2L-216ENST00000439475 TUBGCP4Q9UGJ1 667 aa11.35□□□□□ -0.59
MCF2L-216ENST00000439475 PCDHB8Q9UN66 801 aa11.35□□□□□ -0.59
MCF2L-216ENST00000439475 HPSEQ9Y251 543 aa11.35□□□□□ -0.59
MCF2L-216ENST00000439475 USTQ9Y2C2 406 aa11.35□□□□□ -0.59
MCF2L-216ENST00000439475 PDCD11Q14690 1871 aaKnown RBP11.34□□□□□ -0.59
MCF2L-216ENST00000439475 FAM237AA0A1B0GTK4 181 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 TISP43B9A030 160 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 PI4K2BG5E9Z4 385 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 I3L4J1 428 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 MEFVO15553 781 aaPredicted RBP11.34□□□□□ -0.59
MCF2L-216ENST00000439475 DCXO43602 365 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 ZMYND10O75800 440 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 SPATA31D3P0C874 917 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 TKTP29401 623 aaKnown RBP11.34□□□□□ -0.59
MCF2L-216ENST00000439475 ADSSP30520 456 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 YWHAHQ04917 246 aaPredicted RBP11.34□□□□□ -0.59
MCF2L-216ENST00000439475 PPM1LQ5SGD2 360 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 VARS2Q5ST30 1063 aaKnown RBP11.34□□□□□ -0.59
MCF2L-216ENST00000439475 SPATA31D4Q6ZUB0 917 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 CCDC149Q6ZUS6 474 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 RNF135Q8IUD6 432 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 BRSK2Q8IWQ3 736 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 FSIP1Q8NA03 581 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 C3orf58Q8NDZ4 430 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 GOLGA5Q8TBA6 731 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 SMG7Q92540 1137 aaKnown RBP11.34□□□□□ -0.59
MCF2L-216ENST00000439475 SAAL1Q96ER3 474 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 PRKD2Q9BZL6 878 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 PCIF1Q9H4Z3 704 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 POMKQ9H5K3 350 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 CD320Q9NPF0 282 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 TSHZ2Q9NRE2 1034 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 EXOC1Q9NV70 894 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 DPP3Q9NY33 737 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 RBAKQ9NYW8 714 aaPredicted RBP11.34□□□□□ -0.59
MCF2L-216ENST00000439475 CDY1Q9Y6F8 540 aa11.34□□□□□ -0.59
MCF2L-216ENST00000439475 ACTN4O43707 911 aaKnown RBP11.33□□□□□ -0.6
MCF2L-216ENST00000439475 XYLBO75191 536 aa11.33□□□□□ -0.6
MCF2L-216ENST00000439475 ZNF202O95125 648 aa11.33□□□□□ -0.6
MCF2L-216ENST00000439475 C8AP07357 584 aa11.33□□□□□ -0.6
MCF2L-216ENST00000439475 NFICP08651 508 aa11.33□□□□□ -0.6
MCF2L-216ENST00000439475 HNRNPA1P09651 372 aaKnown RBP eCLIP11.33□□□□□ -0.6
MCF2L-216ENST00000439475 TAF6P49848 677 aa11.33□□□□□ -0.6
MCF2L-216ENST00000439475 NDUFA8P51970 172 aa11.33□□□□□ -0.6
MCF2L-216ENST00000439475 MRPL58Q14197 206 aaKnown RBP11.33□□□□□ -0.6
MCF2L-216ENST00000439475 CTXN3Q4LDR2 81 aa11.33□□□□□ -0.6
MCF2L-216ENST00000439475 C9orf57Q5W0N0 161 aa11.33□□□□□ -0.6
MCF2L-216ENST00000439475 CRELD2Q6UXH1 353 aaPredicted RBP11.33□□□□□ -0.6
MCF2L-216ENST00000439475 EPM2AIP1Q7L775 607 aaPredicted RBP11.33□□□□□ -0.6
MCF2L-216ENST00000439475 OTOP3Q7RTS5 596 aa11.33□□□□□ -0.6
MCF2L-216ENST00000439475 METTL23Q86XA0 190 aa11.33□□□□□ -0.6
MCF2L-216ENST00000439475 TDRD5Q8NAT2 981 aaKnown RBP11.33□□□□□ -0.6
MCF2L-216ENST00000439475 ZNF461Q8TAF7 563 aa11.33□□□□□ -0.6
MCF2L-216ENST00000439475 HPS3Q969F9 1004 aa11.33□□□□□ -0.6
MCF2L-216ENST00000439475 ANKRD36BP1Q96IX9 119 aa11.33□□□□□ -0.6
MCF2L-216ENST00000439475 CBWD1Q9BRT8 395 aa11.33□□□□□ -0.6
MCF2L-216ENST00000439475 GDPD2Q9HCC8 539 aa11.33□□□□□ -0.6
MCF2L-216ENST00000439475 SLC39A2Q9NP94 309 aa11.33□□□□□ -0.6
MCF2L-216ENST00000439475 FBXW11Q9UKB1 542 aa11.33□□□□□ -0.6
MCF2L-216ENST00000439475 DSEQ9UL01 958 aa11.33□□□□□ -0.6
MCF2L-216ENST00000439475 GOLGA8IPA6NC78 632 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 GOLGA8JA6NMD2 632 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 M0QZQ0 153 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 PIRO00625 290 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 WEE2P0C1S8 567 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 TMEM191BP0C7N4 346 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 ODC1P11926 461 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 TYMPP19971 482 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 IGFBP6P24592 240 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-216ENST00000439475 CASP1P29466 404 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 HOXA9P31269 272 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 PNPLA4P41247 253 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 ARPP19P56211 112 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 LILRA4P59901 499 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 TFAMQ00059 246 aaKnown RBP11.32□□□□□ -0.6
MCF2L-216ENST00000439475 EHHADHQ08426 723 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 KNOP1Q1ED39 458 aaKnown RBP11.32□□□□□ -0.6
MCF2L-216ENST00000439475 SV2CQ496J9 727 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 KMT5BQ4FZB7 885 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 TPGS2Q68CL5 300 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 SLC8B1Q6J4K2 584 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 KRBA2Q6ZNG9 492 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 NELFCDQ8IXH7 590 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 THEM5Q8N1Q8 247 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 XXYLT1Q8NBI6 393 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 SCFD1Q8WVM8 642 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 CHAMP1Q96JM3 812 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 SENP8Q96LD8 212 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 ZNF560Q96MR9 790 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 FNBP1Q96RU3 617 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 FGFBP2Q9BYJ0 223 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 IKZF4Q9H2S9 585 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms