RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 CYP4F11Q9HBI6 524 aa16.25■□□□□ 0.19
MSH5-208ENST00000429846 AFF4Q9UHB7 1163 aaKnown RBP16.25■□□□□ 0.19
MSH5-208ENST00000429846 VPS13AQ96RL7 3174 aa16.25■□□□□ 0.19
MSH5-208ENST00000429846 MEFVO15553 781 aaPredicted RBP16.24■□□□□ 0.19
MSH5-208ENST00000429846 CLTAP09496 248 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 PLA2G4BP0C869 781 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 GLULP15104 373 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 GJB2P29033 226 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 LRPAP1P30533 357 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 NCKAP1LP55160 1127 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 ARPP19P56211 112 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 PRSS36Q5K4E3 855 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 IQCEQ6IPM2 695 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 PDZD4Q76G19 769 aaPredicted RBP16.24■□□□□ 0.19
MSH5-208ENST00000429846 LEMD2Q8NC56 503 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 DDX12PQ92771 950 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 DNASE1L2Q92874 299 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 ELSPBP1Q96BH3 223 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 MCRS1Q96EZ8 462 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 BICD1Q96G01 975 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 BORCS6Q96GS4 357 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 TMX3Q96JJ7 454 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 TSPAN18Q96SJ8 248 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 CORO1BQ9BR76 489 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 LTB4R2Q9NPC1 389 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 PCDHB8Q9UN66 801 aa16.24■□□□□ 0.19
MSH5-208ENST00000429846 TTC26A0AVF1 554 aa16.23■□□□□ 0.19
MSH5-208ENST00000429846 XPOTO43592 962 aaKnown RBP16.23■□□□□ 0.19
MSH5-208ENST00000429846 BMP15O95972 392 aa16.23■□□□□ 0.19
MSH5-208ENST00000429846 SP9P0CG40 484 aa16.23■□□□□ 0.19
MSH5-208ENST00000429846 CXCL8P10145 99 aa16.23■□□□□ 0.19
MSH5-208ENST00000429846 CEBPBP17676 345 aa16.23■□□□□ 0.19
MSH5-208ENST00000429846 CYP3A5P20815 502 aa16.23■□□□□ 0.19
MSH5-208ENST00000429846 ABCD1P33897 745 aa16.23■□□□□ 0.19
MSH5-208ENST00000429846 MATR3P43243 847 aaKnown RBP eCLIP16.23■□□□□ 0.19
MSH5-208ENST00000429846 MCM2P49736 904 aa16.23■□□□□ 0.19
MSH5-208ENST00000429846 PPP2R3AQ06190 1150 aa16.23■□□□□ 0.19
MSH5-208ENST00000429846 UBXN2BQ14CS0 331 aa16.23■□□□□ 0.19
MSH5-208ENST00000429846 KCNG4Q8TDN1 519 aa16.23■□□□□ 0.19
MSH5-208ENST00000429846 CALML4Q96GE6 196 aa16.23■□□□□ 0.19
MSH5-208ENST00000429846 NELL2Q99435 816 aa16.23■□□□□ 0.19
MSH5-208ENST00000429846 TUBGCP4Q9UGJ1 667 aa16.23■□□□□ 0.19
MSH5-208ENST00000429846 FBXO4Q9UKT5 387 aa16.23■□□□□ 0.19
MSH5-208ENST00000429846 UBQLN1Q9UMX0 589 aaKnown RBP16.23■□□□□ 0.19
MSH5-208ENST00000429846 EP300Q09472 2414 aaPredicted RBP16.23■□□□□ 0.19
MSH5-208ENST00000429846 COL4A3Q01955 1670 aa16.22■□□□□ 0.19
MSH5-208ENST00000429846 M0QZQ0 153 aa16.22■□□□□ 0.19
MSH5-208ENST00000429846 HNRNPDLO14979 420 aaKnown RBP16.22■□□□□ 0.19
MSH5-208ENST00000429846 NCAM2O15394 837 aa16.22■□□□□ 0.19
MSH5-208ENST00000429846 SEC24AO95486 1093 aa16.22■□□□□ 0.19
MSH5-208ENST00000429846 PIGRP01833 764 aa16.22■□□□□ 0.19
MSH5-208ENST00000429846 CPB1P15086 417 aa16.22■□□□□ 0.19
MSH5-208ENST00000429846 MARCKSP29966 332 aaPredicted RBP16.22■□□□□ 0.19
MSH5-208ENST00000429846 LIG4P49917 911 aa16.22■□□□□ 0.19
MSH5-208ENST00000429846 YWHAHQ04917 246 aaPredicted RBP16.22■□□□□ 0.19
MSH5-208ENST00000429846 ADCY1Q08828 1119 aa16.22■□□□□ 0.19
MSH5-208ENST00000429846 ZNF528Q3MIS6 628 aa16.22■□□□□ 0.19
MSH5-208ENST00000429846 SEZ6Q53EL9 994 aa16.22■□□□□ 0.19
MSH5-208ENST00000429846 CYP4A22Q5TCH4 519 aa16.22■□□□□ 0.19
MSH5-208ENST00000429846 HAUS6Q7Z4H7 955 aa16.22■□□□□ 0.19
MSH5-208ENST00000429846 KIF12Q96FN5 646 aa16.22■□□□□ 0.19
MSH5-208ENST00000429846 PLIN2Q99541 437 aa16.22■□□□□ 0.19
MSH5-208ENST00000429846 UPF2Q9HAU5 1272 aaKnown RBP16.22■□□□□ 0.19
MSH5-208ENST00000429846 ZFP14Q9HCL3 533 aa16.22■□□□□ 0.19
MSH5-208ENST00000429846 MRPS17Q9Y2R5 130 aaKnown RBP16.22■□□□□ 0.19
MSH5-208ENST00000429846 R4GN57 208 aa16.22■□□□□ 0.19
MSH5-208ENST00000429846 ZNF292O60281 2723 aa16.22■□□□□ 0.19
MSH5-208ENST00000429846 FAM170BA6NMN3 283 aa16.21■□□□□ 0.19
MSH5-208ENST00000429846 LAMTOR5O43504 91 aa16.21■□□□□ 0.19
MSH5-208ENST00000429846 LRRN2O75325 713 aa16.21■□□□□ 0.19
MSH5-208ENST00000429846 OAZ2O95190 189 aa16.21■□□□□ 0.19
MSH5-208ENST00000429846 PAX3P23760 479 aa16.21■□□□□ 0.19
MSH5-208ENST00000429846 RPS9P46781 194 aaKnown RBP16.21■□□□□ 0.19
MSH5-208ENST00000429846 AARSP49588 968 aaKnown RBP eCLIP16.21■□□□□ 0.19
MSH5-208ENST00000429846 ZNF131P52739 623 aa16.21■□□□□ 0.19
MSH5-208ENST00000429846 CACNB1Q02641 598 aaPredicted RBP16.21■□□□□ 0.19
MSH5-208ENST00000429846 ARSHQ5FYA8 562 aa16.21■□□□□ 0.19
MSH5-208ENST00000429846 ZBTB41Q5SVQ8 909 aa16.21■□□□□ 0.19
MSH5-208ENST00000429846 ZNF852Q6ZMS4 543 aa16.21■□□□□ 0.19
MSH5-208ENST00000429846 TPRG1Q6ZUI0 275 aa16.21■□□□□ 0.19
MSH5-208ENST00000429846 ERMP1Q7Z2K6 904 aa16.21■□□□□ 0.19
MSH5-208ENST00000429846 BEST2Q8NFU1 509 aa16.21■□□□□ 0.19
MSH5-208ENST00000429846 ZNF512Q96ME7 567 aaPredicted RBP16.21■□□□□ 0.19
MSH5-208ENST00000429846 REEP2Q9BRK0 252 aa16.21■□□□□ 0.19
MSH5-208ENST00000429846 PARVGQ9HBI0 331 aa16.21■□□□□ 0.19
MSH5-208ENST00000429846 ASAH2Q9NR71 780 aa16.21■□□□□ 0.19
MSH5-208ENST00000429846 SPATA6Q9NWH7 488 aaPredicted RBP16.21■□□□□ 0.19
MSH5-208ENST00000429846 TBX20Q9UMR3 447 aa16.21■□□□□ 0.19
MSH5-208ENST00000429846 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.21■□□□□ 0.19
MSH5-208ENST00000429846 COL4A2P08572 1712 aa16.21■□□□□ 0.19
MSH5-208ENST00000429846 OTOGLQ3ZCN5 2332 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 TSC2P49815 1807 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 K7ENM7 598 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 OGTO15294 1046 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 FAM13AO94988 1023 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 FCARP24071 287 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 UBA7P41226 1012 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 ID4P47928 161 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 EPHA5P54756 1037 aa16.2■□□□□ 0.18
MSH5-208ENST00000429846 TWF1Q12792 350 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms