RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 YWHAHQ04917 246 aaPredicted RBP13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 MTAPQ13126 283 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 GRM2Q14416 872 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 ARHGAP15Q53QZ3 475 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 FAM78AQ5JUQ0 283 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 DGKKQ5KSL6 1271 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 MPZL3Q6UWV2 235 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 DSTYKQ6XUX3 929 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 MFSD6LQ8IWD5 586 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 EXOC4Q96A65 974 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 SUSD3Q96L08 255 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 ZSCAN31Q96LW9 406 aaPredicted RBP13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 ASB16Q96NS5 453 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 TSPAN18Q96SJ8 248 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 LLPHQ9BRT6 129 aaKnown RBP13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 PLA2G2FQ9BZM2 168 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 CHRDQ9H2X0 955 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 PLEKHA5Q9HAU0 1116 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 GOLGA2P5Q9HBQ8 144 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 DDX19AQ9NUU7 478 aaKnown RBP13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 THG1LQ9NWX6 298 aaKnown RBP13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 FBXL5Q9UKA1 691 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 LIMCH1Q9UPQ0 1083 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 USP20Q9Y2K6 914 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 PIAS3Q9Y6X2 628 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 WDR27A2RRH5 827 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CLDN3O15551 220 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 HARSP12081 509 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 NPTX2P47972 431 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 AMPD2Q01433 879 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 TWF1Q12792 350 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 SIM2Q14190 667 aaPredicted RBP13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 XKR4Q5GH76 650 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 TSSK4Q6SA08 328 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 ALKAL1Q6UXT8 129 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 DTHD1Q6ZMT9 781 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CEP68Q76N32 757 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 ITIH5Q86UX2 942 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 SPEM1Q8N4L4 309 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 ZSCAN18Q8TBC5 510 aaPredicted RBP13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 NETO1Q8TDF5 533 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 DDX12PQ92771 950 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 BICD1Q96G01 975 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CDK5RAP3Q96JB5 506 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 KIFC3Q9BVG8 833 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 TARS2Q9BW92 718 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CDT1Q9H211 546 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 PRMT8Q9NR22 394 aaPredicted RBP13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 PCDHB8Q9UN66 801 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 ASB3Q9Y575 518 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 WDR81Q562E7 1941 aa13.39□□□□□ -0.27
HLA-DQB3-203ENST00000425319 FAM186AA6NE01 2351 aa13.38□□□□□ -0.27
HLA-DQB3-203ENST00000425319 OR6C75A6NL08 312 aa13.38□□□□□ -0.27
HLA-DQB3-203ENST00000425319 DTNBO60941 627 aa13.38□□□□□ -0.27
HLA-DQB3-203ENST00000425319 TOM1L1O75674 476 aa13.38□□□□□ -0.27
HLA-DQB3-203ENST00000425319 SCP2P22307 547 aa13.38□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CCNE1P24864 410 aa13.38□□□□□ -0.27
HLA-DQB3-203ENST00000425319 MRPL58Q14197 206 aaKnown RBP13.38□□□□□ -0.27
HLA-DQB3-203ENST00000425319 SLC5A9Q2M3M2 681 aa13.38□□□□□ -0.27
HLA-DQB3-203ENST00000425319 PRSS36Q5K4E3 855 aa13.38□□□□□ -0.27
HLA-DQB3-203ENST00000425319 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.38□□□□□ -0.27
HLA-DQB3-203ENST00000425319 MAP4K3Q8IVH8 894 aa13.38□□□□□ -0.27
HLA-DQB3-203ENST00000425319 NELL1Q92832 810 aa13.38□□□□□ -0.27
HLA-DQB3-203ENST00000425319 TBC1D32Q96NH3 1257 aa13.38□□□□□ -0.27
HLA-DQB3-203ENST00000425319 GCNAQ96QF7 691 aa13.38□□□□□ -0.27
HLA-DQB3-203ENST00000425319 POLD4Q9HCU8 107 aa13.38□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CNTN3Q9P232 1028 aa13.38□□□□□ -0.27
HLA-DQB3-203ENST00000425319 LARSQ9P2J5 1176 aaKnown RBP13.38□□□□□ -0.27
HLA-DQB3-203ENST00000425319 RIF1Q5UIP0 2472 aaKnown RBP13.38□□□□□ -0.27
HLA-DQB3-203ENST00000425319 HEPACAM2A8MVW5 462 aa13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CHADO15335 359 aa13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 JAK2O60674 1132 aa13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 HIP1RO75146 1068 aa13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CLTAP09496 248 aa13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 ABCD1P33897 745 aa13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 SPEM2Q0P670 501 aa13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 NOLC1Q14978 699 aaKnown RBP eCLIP13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 VEPH1Q14D04 833 aa13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 ARHGAP29Q52LW3 1261 aa13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 IL31Q6EBC2 164 aa13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 ZPBP2Q6X784 338 aa13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 SYNPOQ8N3V7 929 aa13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 NTPCRQ9BSD7 190 aaKnown RBP13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 TRPV4Q9HBA0 871 aa13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 PTPRHQ9HD43 1115 aa13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 ANKFY1Q9P2R3 1169 aa13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 ZMYM5Q9UJ78 669 aa13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 UBQLN1Q9UMX0 589 aaKnown RBP13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 TDRD15B5MCY1 1934 aaKnown RBP13.37□□□□□ -0.27
HLA-DQB3-203ENST00000425319 C2orf16Q68DN1 1984 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 DCDC2BA2VCK2 349 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 SLC16A4O15374 487 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 ATG13O75143 517 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 SEC24AO95486 1093 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CYP3A5P20815 502 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 VIPR2P41587 438 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 TUFMP49411 452 aaKnown RBP13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 PLCB2Q00722 1185 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 PPP2R3AQ06190 1150 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 PTGDRQ13258 359 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms