RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 TDRPQ86YL5 185 aa13.48□□□□□ -0.25
CTCFL-204ENST00000422869 SEMA4DQ92854 862 aa13.48□□□□□ -0.25
CTCFL-204ENST00000422869 MKL1Q969V6 931 aa13.48□□□□□ -0.25
CTCFL-204ENST00000422869 CADM1Q9BY67 442 aaKnown RBP13.48□□□□□ -0.25
CTCFL-204ENST00000422869 ZFP69BQ9UJL9 534 aa13.48□□□□□ -0.25
CTCFL-204ENST00000422869 ZNF335Q9H4Z2 1342 aaPredicted RBP13.48□□□□□ -0.25
CTCFL-204ENST00000422869 QSER1Q2KHR3 1735 aa13.48□□□□□ -0.25
CTCFL-204ENST00000422869 C2CD2LO14523 706 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 TYROBPO43914 113 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 LMNAP02545 664 aaKnown RBP13.47□□□□□ -0.25
CTCFL-204ENST00000422869 RALAP11233 206 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 ATP2B4P23634 1241 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 MXI1P50539 228 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 SESN3P58005 492 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 PPP1R15BQ5SWA1 713 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 FOXB2Q5VYV0 432 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 ACAD10Q6JQN1 1059 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 IRGCQ6NXR0 463 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 MTDHQ86UE4 582 aaKnown RBP13.47□□□□□ -0.25
CTCFL-204ENST00000422869 SIAH1Q8IUQ4 282 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 CCDC89Q8N998 374 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 KCND2Q9NZV8 630 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 WDR35Q9P2L0 1181 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 POLLQ9UGP5 575 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 SMG5Q9UPR3 1016 aaKnown RBP13.47□□□□□ -0.25
CTCFL-204ENST00000422869 K7ENM7 598 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 FDX1P10109 184 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 VHLP40337 213 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 GCLCP48506 637 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-204ENST00000422869 GTF2IP78347 998 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 FASTKD3Q14CZ7 662 aaKnown RBP13.47□□□□□ -0.25
CTCFL-204ENST00000422869 PCNX4Q63HM2 1172 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 ZNF365Q70YC5 407 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 TMEM174Q8WUU8 243 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 ZFAND2BQ8WV99 257 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 NACC1Q96RE7 527 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 SAR1AQ9NR31 198 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 KANSL3Q9P2N6 904 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 STOML1Q9UBI4 398 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 LRCH1Q9Y2L9 728 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.47□□□□□ -0.25
CTCFL-204ENST00000422869 FAM196BA6NMK8 535 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 POC1B-GALNT4F8VUJ3 575 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 BMP3P12645 472 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 CA4P22748 312 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 PRELPP51888 382 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 P3H1Q32P28 736 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 BBOF1Q8ND07 529 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 CFAP57Q96MR6 1250 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 SMC6Q96SB8 1091 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 NPHS2Q9NP85 383 aa13.47□□□□□ -0.25
CTCFL-204ENST00000422869 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.47□□□□□ -0.25
CTCFL-204ENST00000422869 PLSCR1O15162 318 aa13.46□□□□□ -0.25
CTCFL-204ENST00000422869 RTN3O95197 1032 aaPredicted RBP13.46□□□□□ -0.25
CTCFL-204ENST00000422869 CALCAP01258 141 aa13.46□□□□□ -0.25
CTCFL-204ENST00000422869 RPS6KA3P51812 740 aa13.46□□□□□ -0.25
CTCFL-204ENST00000422869 RCN1Q15293 331 aa13.46□□□□□ -0.25
CTCFL-204ENST00000422869 CCNG2Q16589 344 aa13.46□□□□□ -0.25
CTCFL-204ENST00000422869 SNX30Q5VWJ9 437 aa13.46□□□□□ -0.25
CTCFL-204ENST00000422869 MTHFD1LQ6UB35 978 aa13.46□□□□□ -0.25
CTCFL-204ENST00000422869 PTF1AQ7RTS3 328 aa13.46□□□□□ -0.25
CTCFL-204ENST00000422869 ANKS1BQ7Z6G8 1248 aa13.46□□□□□ -0.25
CTCFL-204ENST00000422869 HELQQ8TDG4 1101 aa13.46□□□□□ -0.25
CTCFL-204ENST00000422869 ZNF75CPQ92670 426 aaPredicted RBP13.46□□□□□ -0.25
CTCFL-204ENST00000422869 ARHGEF1Q92888 912 aaKnown RBP13.46□□□□□ -0.25
CTCFL-204ENST00000422869 SAYSD1Q9NPB0 183 aa13.46□□□□□ -0.25
CTCFL-204ENST00000422869 HSPBP1Q9NZL4 362 aa13.46□□□□□ -0.25
CTCFL-204ENST00000422869 A0A1W2PPM1 405 aa13.46□□□□□ -0.26
CTCFL-204ENST00000422869 C6orf229H3BNL8 230 aa13.46□□□□□ -0.26
CTCFL-204ENST00000422869 KRT15P19012 456 aa13.46□□□□□ -0.26
CTCFL-204ENST00000422869 MFAP3P55082 362 aa13.46□□□□□ -0.26
CTCFL-204ENST00000422869 OCRLQ01968 901 aa13.46□□□□□ -0.26
CTCFL-204ENST00000422869 NFIAQ12857 509 aa13.46□□□□□ -0.26
CTCFL-204ENST00000422869 CLEC16AQ2KHT3 1053 aa13.46□□□□□ -0.26
CTCFL-204ENST00000422869 RC3H1Q5TC82 1133 aaKnown RBP13.46□□□□□ -0.26
CTCFL-204ENST00000422869 LLGL2Q6P1M3 1020 aa13.46□□□□□ -0.26
CTCFL-204ENST00000422869 ZFPM1Q8IX07 1006 aa13.46□□□□□ -0.26
CTCFL-204ENST00000422869 CERS5Q8N5B7 392 aa13.46□□□□□ -0.26
CTCFL-204ENST00000422869 GLIS1Q8NBF1 620 aa13.46□□□□□ -0.26
CTCFL-204ENST00000422869 CFAP61Q8NHU2 1237 aa13.46□□□□□ -0.26
CTCFL-204ENST00000422869 SCG3Q8WXD2 468 aaKnown RBP13.46□□□□□ -0.26
CTCFL-204ENST00000422869 ELMO3Q96BJ8 720 aa13.46□□□□□ -0.26
CTCFL-204ENST00000422869 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.46□□□□□ -0.26
CTCFL-204ENST00000422869 PMM2O15305 246 aa13.45□□□□□ -0.26
CTCFL-204ENST00000422869 ADRB2P07550 413 aa13.45□□□□□ -0.26
CTCFL-204ENST00000422869 RCN2Q14257 317 aa13.45□□□□□ -0.26
CTCFL-204ENST00000422869 MAPK6Q16659 721 aa13.45□□□□□ -0.26
CTCFL-204ENST00000422869 CCDC142Q17RM4 750 aa13.45□□□□□ -0.26
CTCFL-204ENST00000422869 ACSBG2Q5FVE4 666 aa13.45□□□□□ -0.26
CTCFL-204ENST00000422869 HP1BP3Q5SSJ5 553 aaPredicted RBP13.45□□□□□ -0.26
CTCFL-204ENST00000422869 C12orf56Q8IXR9 622 aa13.45□□□□□ -0.26
CTCFL-204ENST00000422869 XXYLT1Q8NBI6 393 aa13.45□□□□□ -0.26
CTCFL-204ENST00000422869 DHX38Q92620 1227 aaKnown RBP13.45□□□□□ -0.26
CTCFL-204ENST00000422869 KIFAP3Q92845 792 aa13.45□□□□□ -0.26
CTCFL-204ENST00000422869 PTCD3Q96EY7 689 aaKnown RBP13.45□□□□□ -0.26
CTCFL-204ENST00000422869 CCDC17Q96LX7 622 aa13.45□□□□□ -0.26
CTCFL-204ENST00000422869 ADAM33Q9BZ11 813 aa13.45□□□□□ -0.26
CTCFL-204ENST00000422869 NYAP2Q9P242 653 aa13.45□□□□□ -0.26
CTCFL-204ENST00000422869 PIK3CDO00329 1044 aa13.45□□□□□ -0.26
CTCFL-204ENST00000422869 KRT36O76013 467 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms