RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 AARSP49588 968 aaKnown RBP eCLIP16.11■□□□□ 0.17
LINC01840-201ENST00000421870 EHHADHQ08426 723 aa16.11■□□□□ 0.17
LINC01840-201ENST00000421870 UVSSAQ2YD98 709 aa16.11■□□□□ 0.17
LINC01840-201ENST00000421870 VARS2Q5ST30 1063 aaKnown RBP16.11■□□□□ 0.17
LINC01840-201ENST00000421870 JADE1Q6IE81 842 aa16.11■□□□□ 0.17
LINC01840-201ENST00000421870 TMEM130Q8N3G9 435 aa16.11■□□□□ 0.17
LINC01840-201ENST00000421870 LEO1Q8WVC0 666 aaPredicted RBP16.11■□□□□ 0.17
LINC01840-201ENST00000421870 WDR6Q9NNW5 1121 aaKnown RBP16.11■□□□□ 0.17
LINC01840-201ENST00000421870 KCNH3Q9ULD8 1083 aa16.11■□□□□ 0.17
LINC01840-201ENST00000421870 CDY1Q9Y6F8 540 aa16.11■□□□□ 0.17
LINC01840-201ENST00000421870 ANO9A1A5B4 782 aa16.1■□□□□ 0.17
LINC01840-201ENST00000421870 PRR33A8MZF0 331 aa16.1■□□□□ 0.17
LINC01840-201ENST00000421870 PIRO00625 290 aa16.1■□□□□ 0.17
LINC01840-201ENST00000421870 ABLIM3O94929 683 aa16.1■□□□□ 0.17
LINC01840-201ENST00000421870 LDHAP00338 332 aaKnown RBP16.1■□□□□ 0.17
LINC01840-201ENST00000421870 PAX3P23760 479 aa16.1■□□□□ 0.17
LINC01840-201ENST00000421870 HOXA9P31269 272 aa16.1■□□□□ 0.17
LINC01840-201ENST00000421870 HOXD13P35453 343 aa16.1■□□□□ 0.17
LINC01840-201ENST00000421870 KRT85P78386 507 aa16.1■□□□□ 0.17
LINC01840-201ENST00000421870 EPM2AIP1Q7L775 607 aaPredicted RBP16.1■□□□□ 0.17
LINC01840-201ENST00000421870 BEST2Q8NFU1 509 aa16.1■□□□□ 0.17
LINC01840-201ENST00000421870 ZNF461Q8TAF7 563 aa16.1■□□□□ 0.17
LINC01840-201ENST00000421870 ZNF507Q8TCN5 953 aa16.1■□□□□ 0.17
LINC01840-201ENST00000421870 SMG7Q92540 1137 aaKnown RBP16.1■□□□□ 0.17
LINC01840-201ENST00000421870 HPS3Q969F9 1004 aa16.1■□□□□ 0.17
LINC01840-201ENST00000421870 FAM212AQ96EL1 285 aa16.1■□□□□ 0.17
LINC01840-201ENST00000421870 TSHZ2Q9NRE2 1034 aa16.1■□□□□ 0.17
LINC01840-201ENST00000421870 PCDHB8Q9UN66 801 aa16.1■□□□□ 0.17
LINC01840-201ENST00000421870 C2CD2Q9Y426 696 aa16.1■□□□□ 0.17
LINC01840-201ENST00000421870 SCN1AP35498 2009 aa16.1■□□□□ 0.17
LINC01840-201ENST00000421870 PVALEFA0A1B0GWK0 134 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 H7C4K7 107 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 PRPF6O94906 941 aaKnown RBP16.09■□□□□ 0.17
LINC01840-201ENST00000421870 OAZ2O95190 189 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 HNRNPA1P09651 372 aaKnown RBP eCLIP16.09■□□□□ 0.17
LINC01840-201ENST00000421870 SLFN14P0C7P3 912 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 SP100P23497 879 aaPredicted RBP16.09■□□□□ 0.17
LINC01840-201ENST00000421870 MCM4P33991 863 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 LILRA4P59901 499 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 ZXDAP98168 799 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 BECN1Q14457 450 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 PTPN21Q16825 1174 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 CCDC149Q6ZUS6 474 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 STXBP4Q6ZWJ1 553 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 UNC13DQ70J99 1090 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 OTOP3Q7RTS5 596 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 NT5DC4Q86YG4 428 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 SYCP3Q8IZU3 236 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 GLIS3Q8NEA6 775 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 APPL2Q8NEU8 664 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 ACSF2Q96CM8 615 aaPredicted RBP16.09■□□□□ 0.17
LINC01840-201ENST00000421870 CHAMP1Q96JM3 812 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 SPATA32Q96LK8 384 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 HPSEQ9Y251 543 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 ATP6V1DQ9Y5K8 247 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 NOTCH4Q99466 2003 aa16.09■□□□□ 0.17
LINC01840-201ENST00000421870 DOCK8Q8NF50 2099 aa16.08■□□□□ 0.16
LINC01840-201ENST00000421870 FAM237AA0A1B0GTK4 181 aa16.08■□□□□ 0.16
LINC01840-201ENST00000421870 FAM86C2PA6NEL3 165 aa16.08■□□□□ 0.16
LINC01840-201ENST00000421870 EIF3DO15371 548 aaKnown RBP eCLIP16.08■□□□□ 0.16
LINC01840-201ENST00000421870 IL18RAPO95256 599 aa16.08■□□□□ 0.16
LINC01840-201ENST00000421870 C8AP07357 584 aa16.08■□□□□ 0.16
LINC01840-201ENST00000421870 NFICP08651 508 aa16.08■□□□□ 0.16
LINC01840-201ENST00000421870 POU2F2P09086 479 aa16.08■□□□□ 0.16
LINC01840-201ENST00000421870 GUCY2FP51841 1108 aa16.08■□□□□ 0.16
LINC01840-201ENST00000421870 ASIC1P78348 528 aa16.08■□□□□ 0.16
LINC01840-201ENST00000421870 ROR1Q01973 937 aa16.08■□□□□ 0.16
LINC01840-201ENST00000421870 TMEM132DQ14C87 1099 aa16.08■□□□□ 0.16
LINC01840-201ENST00000421870 C9orf57Q5W0N0 161 aa16.08■□□□□ 0.16
LINC01840-201ENST00000421870 TDRD5Q8NAT2 981 aaKnown RBP16.08■□□□□ 0.16
LINC01840-201ENST00000421870 ZSWIM2Q8NEG5 633 aa16.08■□□□□ 0.16
LINC01840-201ENST00000421870 FAM213AQ9BRX8 229 aa16.08■□□□□ 0.16
LINC01840-201ENST00000421870 OXCT2Q9BYC2 517 aaPredicted RBP16.08■□□□□ 0.16
LINC01840-201ENST00000421870 SCAND2PQ9GZW5 306 aaPredicted RBP16.08■□□□□ 0.16
LINC01840-201ENST00000421870 PIDD1Q9HB75 910 aa16.08■□□□□ 0.16
LINC01840-201ENST00000421870 SERTAD1Q9UHV2 236 aa16.08■□□□□ 0.16
LINC01840-201ENST00000421870 FBXL5Q9UKA1 691 aa16.08■□□□□ 0.16
LINC01840-201ENST00000421870 TECTAO75443 2155 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 A0A1B0GVL5 298 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 WDR27A2RRH5 827 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 PPEF2O14830 753 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 KIAA0391O15091 583 aaKnown RBP16.07■□□□□ 0.16
LINC01840-201ENST00000421870 ACTN4O43707 911 aaKnown RBP16.07■□□□□ 0.16
LINC01840-201ENST00000421870 EXTL3O43909 919 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 N4BP1O75113 896 aaKnown RBP16.07■□□□□ 0.16
LINC01840-201ENST00000421870 ATF2P15336 505 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 CASP1P29466 404 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 AFMP43652 599 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 CUL4BQ13620 913 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 FAM26FQ5R3K3 315 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 PPM1LQ5SGD2 360 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 LIN9Q5TKA1 542 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 TRIM67Q6ZTA4 783 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 BMP8AQ7Z5Y6 402 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 SAAL1Q96ER3 474 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 CBWD1Q9BRT8 395 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 BLZF1Q9H2G9 400 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 DPP3Q9NY33 737 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 LIMD1Q9UGP4 676 aa16.07■□□□□ 0.16
LINC01840-201ENST00000421870 USP25Q9UHP3 1055 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms