RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 UBQLN1Q9UMX0 589 aaKnown RBP10.42□□□□□ -0.74
RIF1-202ENST00000414861 AGAP1Q9UPQ3 857 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 ZC3H11AO75152 810 aaKnown RBP eCLIP10.41□□□□□ -0.74
RIF1-202ENST00000414861 OFD1O75665 1012 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 POMCP01189 267 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 FECHP22830 423 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 IGFBP6P24592 240 aaPredicted RBP10.41□□□□□ -0.74
RIF1-202ENST00000414861 GATMP50440 423 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 WDR44Q5JSH3 913 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 MFSD5Q6N075 450 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 C7orf61Q8IZ16 206 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 CRIPAKQ8N1N5 446 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 BEST2Q8NFU1 509 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 PGBD4Q96DM1 585 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 ABHD8Q96I13 439 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 SPAG5Q96R06 1193 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 POLIQ9UNA4 740 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 COL4A6Q14031 1691 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 B4GALT3O60512 393 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 ACRP10323 421 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 RFX1P22670 979 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 RFC2P35250 354 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 MEA1Q16626 185 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 C9orf57Q5W0N0 161 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 CNKSR3Q6P9H4 555 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 SCARA5Q6ZMJ2 495 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.41□□□□□ -0.742e-9■■■■■ 29.4
RIF1-202ENST00000414861 RABGGTAQ92696 567 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 CHP1Q99653 195 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 STK33Q9BYT3 514 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 IMPG2Q9BZV3 1241 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 TMEM161AQ9NX61 479 aa10.41□□□□□ -0.74
RIF1-202ENST00000414861 ANO9A1A5B4 782 aa10.4□□□□□ -0.74
RIF1-202ENST00000414861 SOWAHDA6NJG2 315 aa10.4□□□□□ -0.74
RIF1-202ENST00000414861 FOXN3O00409 490 aaPredicted RBP10.4□□□□□ -0.74
RIF1-202ENST00000414861 INPPL1O15357 1258 aa10.4□□□□□ -0.74
RIF1-202ENST00000414861 EOMESO95936 686 aa10.4□□□□□ -0.74
RIF1-202ENST00000414861 THP07101 528 aa10.4□□□□□ -0.74
RIF1-202ENST00000414861 PLEKP08567 350 aaPredicted RBP10.4□□□□□ -0.74
RIF1-202ENST00000414861 HNRNPH3P31942 346 aaKnown RBP10.4□□□□□ -0.74
RIF1-202ENST00000414861 ASPAP45381 313 aa10.4□□□□□ -0.74
RIF1-202ENST00000414861 GCNT1Q02742 428 aa10.4□□□□□ -0.74
RIF1-202ENST00000414861 ARID5AQ03989 594 aa10.4□□□□□ -0.74
RIF1-202ENST00000414861 SGSM1Q2NKQ1 1148 aa10.4□□□□□ -0.74
RIF1-202ENST00000414861 ZNF397Q8NF99 534 aaPredicted RBP10.4□□□□□ -0.74
RIF1-202ENST00000414861 SHC3Q92529 594 aa10.4□□□□□ -0.74
RIF1-202ENST00000414861 TRIM44Q96DX7 344 aaPredicted RBP10.4□□□□□ -0.74
RIF1-202ENST00000414861 HPDLQ96IR7 371 aa10.4□□□□□ -0.74
RIF1-202ENST00000414861 BAG1Q99933 345 aaPredicted RBP10.4□□□□□ -0.74
RIF1-202ENST00000414861 PAAF1Q9BRP4 392 aa10.4□□□□□ -0.74
RIF1-202ENST00000414861 NIF3L1Q9GZT8 377 aa10.4□□□□□ -0.74
RIF1-202ENST00000414861 NXF1Q9UBU9 619 aaKnown RBP10.4□□□□□ -0.74
RIF1-202ENST00000414861 PYCARDQ9ULZ3 195 aa10.4□□□□□ -0.74
RIF1-202ENST00000414861 CASTOR2A6NHX0 329 aa10.4□□□□□ -0.75
RIF1-202ENST00000414861 GFPT2O94808 682 aa10.4□□□□□ -0.75
RIF1-202ENST00000414861 SKILP12757 684 aa10.4□□□□□ -0.75
RIF1-202ENST00000414861 RAP1GAPP47736 663 aa10.4□□□□□ -0.75
RIF1-202ENST00000414861 RBP5P82980 135 aa10.4□□□□□ -0.75
RIF1-202ENST00000414861 CUL2Q13617 745 aa10.4□□□□□ -0.75
RIF1-202ENST00000414861 MTF1Q14872 753 aa10.4□□□□□ -0.75
RIF1-202ENST00000414861 SFMBT2Q5VUG0 894 aa10.4□□□□□ -0.75
RIF1-202ENST00000414861 HGSNATQ68CP4 663 aa10.4□□□□□ -0.75
RIF1-202ENST00000414861 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.4□□□□□ -0.75
RIF1-202ENST00000414861 RANBP2P49792 3224 aaKnown RBP10.39□□□□□ -0.75
RIF1-202ENST00000414861 PIRO00625 290 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 SPTLC1O15269 473 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 XPOTO43592 962 aaKnown RBP10.39□□□□□ -0.75
RIF1-202ENST00000414861 SYN1P17600 705 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 CYP3A5P20815 502 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 SOX5P35711 763 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 MFAP3P55082 362 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 GRIK3Q13003 919 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 WDR72Q3MJ13 1102 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 GLB1LQ6UWU2 654 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 TMEM199Q8N511 208 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 C3orf58Q8NDZ4 430 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 TSPAN18Q96SJ8 248 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 SDCBP2Q9H190 292 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 ELAC1Q9H777 363 aaKnown RBP10.39□□□□□ -0.75
RIF1-202ENST00000414861 SMYD3Q9H7B4 428 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 VRTNQ9H8Y1 702 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 UBN1Q9NPG3 1134 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 ACP6Q9NPH0 428 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 ARHGAP20Q9P2F6 1191 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 HCSTQ9UBK5 93 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 MYO6Q9UM54 1294 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 PCDHB7Q9Y5E2 793 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 EVI5O60447 810 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 CALCAP01258 141 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 ACO1P21399 889 aaKnown RBP10.39□□□□□ -0.75
RIF1-202ENST00000414861 LRPAP1P30533 357 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 CLCNKBP51801 687 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 DEFB103AP81534 67 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 IKBKEQ14164 716 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 HS1BP3Q53T59 392 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 ZNF667Q5HYK9 610 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 RAD9BQ6WBX8 426 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 C16orf59Q7L2K0 433 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 IRF2BP2Q7Z5L9 587 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 TMCO2Q7Z6W1 182 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms