RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 AMPD2Q01433 879 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 EXOSC10Q01780 885 aaKnown RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 C19orf57Q0VDD7 668 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 TWF1Q12792 350 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 LMAN2Q12907 356 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 PPP2R5CQ13362 524 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 PLD1Q13393 1074 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 CAPSQ13938 189 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 KRT32Q14532 448 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 NECTIN1Q15223 517 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 EPHA7Q15375 998 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 TEAD2Q15562 447 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZNF423Q2M1K9 1284 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 UAP1L1Q3KQV9 507 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 ITPRIPL2Q3MIP1 535 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 FBXO43Q4G163 708 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 CTXN3Q4LDR2 81 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 USP39Q53GS9 565 aaKnown RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 CREB3L3Q68CJ9 461 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 TPGS2Q68CL5 300 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 KIAA1211LQ6NV74 962 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 C19orf48Q6RUI8 117 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 PPP4R3CPQ6ZMV5 832 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 CYP2U1Q7Z449 544 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 APBB1IPQ7Z5R6 666 aaPredicted RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 CDR2LQ86X02 465 aaPredicted RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 NOSTRINQ8IVI9 506 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 ARID3BQ8IVW6 561 aaPredicted RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZBTB8OSQ8IWT0 167 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 TPH2Q8IWU9 490 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 HS6ST3Q8IZP7 471 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 GLIS3Q8NEA6 775 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 DEFB124Q8NES8 71 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 CCDC26Q8TAB7 109 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 TTC8Q8TAM2 541 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 ETNPPLQ8TBG4 499 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 BPIFB1Q8TDL5 484 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 ASAP3Q8TDY4 903 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 EXOC4Q96A65 974 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 ACDQ96AP0 544 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 DDX27Q96GQ7 796 aaKnown RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 PRIMPOLQ96LW4 560 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 FAM20AQ96MK3 541 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 TCEANC2Q96MN5 208 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 CCDC43Q96MW1 224 aaKnown RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 UROC1Q96N76 676 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 ADPGKQ9BRR6 497 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 LXNQ9BS40 222 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 MKNK1Q9BUB5 465 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 NUSAP1Q9BXS6 441 aaKnown RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 LSG1Q9H089 658 aaKnown RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 DUSP15Q9H1R2 295 aaPredicted RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 XPNPEP1Q9NQW7 623 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 SH3GLB2Q9NR46 395 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLC38A7Q9NVC3 462 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 PRMT7Q9NVM4 692 aaPredicted RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 THG1LQ9NWX6 298 aaKnown RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 OBP2AQ9NY56 170 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 SNTG2Q9NY99 539 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 GTSE1Q9NYZ3 720 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 CEP72Q9P209 647 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 WRAP73Q9P2S5 460 aaPredicted RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 EBF1Q9UH73 591 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 AFF4Q9UHB7 1163 aaKnown RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 DDX25Q9UHL0 483 aaKnown RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 FBXL5Q9UKA1 691 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 TPCN1Q9ULQ1 816 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 GPSM3Q9Y4H4 160 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 NUB1Q9Y5A7 615 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 MIA3Q5JRA6 1907 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 CABIN1Q9Y6J0 2220 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 RALGAPA1Q6GYQ0 2036 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 LAMA4Q16363 1823 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 BPTFQ12830 3046 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 DMXL2Q8TDJ6 3036 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 USP9XQ93008 2570 aaPredicted RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 ABCA7Q8IZY2 2146 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 HECTD1Q9ULT8 2610 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 COL4A3Q01955 1670 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 GCN1Q92616 2671 aaKnown RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 MYH9P35579 1960 aaKnown RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 NOTCH4Q99466 2003 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 SMIM28A0A1B0GU29 152 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 CCDC194A0A1B0GVG4 234 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 SPAARA0A1B0GVQ0 90 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 LRRIQ4A6NIV6 560 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 UPK3BL1B0FP48 263 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 UPK3BL2E5RIL1 263 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 I3L4J1 428 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 ACKR2O00590 384 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 PODXLO00592 558 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 TRDMT1O14717 391 aaKnown RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZBTB39O15060 712 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 DCLK1O15075 740 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 MEFVO15553 781 aaPredicted RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 RNF40O75150 1001 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 LYPLA2O95372 231 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 BAG4O95429 457 aaKnown RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 FGF19O95750 216 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 CPB1P15086 417 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms