RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 HNRNPA1P09651 372 aaKnown RBP eCLIP19.24■□□□□ 0.67
LSM5-204ENST00000409909 PPM1LQ5SGD2 360 aa19.24■□□□□ 0.67
LSM5-204ENST00000409909 LIN9Q5TKA1 542 aa19.24■□□□□ 0.67
LSM5-204ENST00000409909 SPATA1Q5VX52 437 aa19.24■□□□□ 0.67
LSM5-204ENST00000409909 BMP8AQ7Z5Y6 402 aa19.24■□□□□ 0.67
LSM5-204ENST00000409909 ZSWIM2Q8NEG5 633 aa19.24■□□□□ 0.67
LSM5-204ENST00000409909 SLC7A14Q8TBB6 771 aa19.24■□□□□ 0.67
LSM5-204ENST00000409909 KCNG4Q8TDN1 519 aa19.24■□□□□ 0.67
LSM5-204ENST00000409909 DHX58Q96C10 678 aa19.24■□□□□ 0.67
LSM5-204ENST00000409909 ACCSQ96QU6 501 aa19.24■□□□□ 0.67
LSM5-204ENST00000409909 MYADMQ96S97 322 aa19.24■□□□□ 0.67
LSM5-204ENST00000409909 TSPAN18Q96SJ8 248 aa19.24■□□□□ 0.67
LSM5-204ENST00000409909 TNMDQ9H2S6 317 aa19.24■□□□□ 0.67
LSM5-204ENST00000409909 ZNF318Q5VUA4 2279 aa19.24■□□□□ 0.67
LSM5-204ENST00000409909 M0QZQ0 153 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 CCL16O15467 120 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 NFICP08651 508 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 ME1P48163 572 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 ROR1Q01973 937 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 MTMR3Q13615 1198 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 UVSSAQ2YD98 709 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 ATL3Q6DD88 541 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 GRASPQ7Z6J2 395 aaPredicted RBP19.23■□□□□ 0.67
LSM5-204ENST00000409909 CD302Q8IX05 232 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 IQUBQ8NA54 791 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 ZNF461Q8TAF7 563 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 POMGNT1Q8WZA1 660 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 HPS3Q969F9 1004 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 PBXIP1Q96AQ6 731 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 CUEDC2Q9H467 287 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 FBXL5Q9UKA1 691 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 RCOR1Q9UKL0 485 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 PCDHB8Q9UN66 801 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 ZDHHC9Q9Y397 364 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 HCN4Q9Y3Q4 1203 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 PCDHB13Q9Y5F0 798 aa19.23■□□□□ 0.67
LSM5-204ENST00000409909 WDR27A2RRH5 827 aa19.22■□□□□ 0.67
LSM5-204ENST00000409909 ABLIM3O94929 683 aa19.22■□□□□ 0.67
LSM5-204ENST00000409909 HOXA9P31269 272 aa19.22■□□□□ 0.67
LSM5-204ENST00000409909 GBP2P32456 591 aaPredicted RBP19.22■□□□□ 0.67
LSM5-204ENST00000409909 AARSP49588 968 aaKnown RBP eCLIP19.22■□□□□ 0.67
LSM5-204ENST00000409909 NTHL1P78549 312 aa19.22■□□□□ 0.67
LSM5-204ENST00000409909 CCDC65Q8IXS2 484 aa19.22■□□□□ 0.67
LSM5-204ENST00000409909 UBALD2Q8IYN6 164 aa19.22■□□□□ 0.67
LSM5-204ENST00000409909 GLIS3Q8NEA6 775 aa19.22■□□□□ 0.67
LSM5-204ENST00000409909 CHAMP1Q96JM3 812 aa19.22■□□□□ 0.67
LSM5-204ENST00000409909 TRIM9Q9C026 710 aa19.22■□□□□ 0.67
LSM5-204ENST00000409909 ASB7Q9H672 318 aa19.22■□□□□ 0.67
LSM5-204ENST00000409909 KCNK12Q9HB15 430 aa19.22■□□□□ 0.67
LSM5-204ENST00000409909 EXOC7Q9UPT5 735 aa19.22■□□□□ 0.67
LSM5-204ENST00000409909 DERAQ9Y315 318 aa19.22■□□□□ 0.67
LSM5-204ENST00000409909 TIMM13Q9Y5L4 95 aaPredicted RBP19.22■□□□□ 0.67
LSM5-204ENST00000409909 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.22■□□□□ 0.67
LSM5-204ENST00000409909 H7C4K7 107 aa19.21■□□□□ 0.67
LSM5-204ENST00000409909 POLR2DO15514 142 aaKnown RBP19.21■□□□□ 0.67
LSM5-204ENST00000409909 XPOTO43592 962 aaKnown RBP19.21■□□□□ 0.67
LSM5-204ENST00000409909 PRPF6O94906 941 aaKnown RBP19.21■□□□□ 0.67
LSM5-204ENST00000409909 ARPP19P56211 112 aa19.21■□□□□ 0.67
LSM5-204ENST00000409909 TMEM132DQ14C87 1099 aa19.21■□□□□ 0.67
LSM5-204ENST00000409909 POSTNQ15063 836 aa19.21■□□□□ 0.67
LSM5-204ENST00000409909 CTXN3Q4LDR2 81 aa19.21■□□□□ 0.67
LSM5-204ENST00000409909 RESP18Q5W5W9 173 aa19.21■□□□□ 0.67
LSM5-204ENST00000409909 APPL2Q8NEU8 664 aa19.21■□□□□ 0.67
LSM5-204ENST00000409909 BEST2Q8NFU1 509 aa19.21■□□□□ 0.67
LSM5-204ENST00000409909 MFSD14AQ96MC6 490 aa19.21■□□□□ 0.67
LSM5-204ENST00000409909 NOTCH4Q99466 2003 aa19.21■□□□□ 0.67
LSM5-204ENST00000409909 LRRC27Q9C0I9 530 aa19.21■□□□□ 0.67
LSM5-204ENST00000409909 EPS15L1Q9UBC2 864 aa19.21■□□□□ 0.67
LSM5-204ENST00000409909 CFAP45Q9UL16 551 aa19.21■□□□□ 0.67
LSM5-204ENST00000409909 ANO9A1A5B4 782 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 PIRO00625 290 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 SPTLC1O15269 473 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 OAZ2O95190 189 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 SEC24AO95486 1093 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 PDGFBP01127 241 aaPredicted RBP19.2■□□□□ 0.66
LSM5-204ENST00000409909 POU2F2P09086 479 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 WNT7BP56706 349 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 LILRA4P59901 499 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 POU5F1Q01860 360 aaKnown RBP19.2■□□□□ 0.66
LSM5-204ENST00000409909 ALCAMQ13740 583 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 C9orf57Q5W0N0 161 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 CNNM4Q6P4Q7 775 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 RTL10Q7L3V2 364 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 GET4Q7L5D6 327 aaPredicted RBP19.2■□□□□ 0.66
LSM5-204ENST00000409909 SYCP3Q8IZU3 236 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 RSAD2Q8WXG1 361 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 SAAL1Q96ER3 474 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 C7orf25Q9BPX7 421 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 FAM213AQ9BRX8 229 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 HCFC1R1Q9NWW0 138 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.2■□□□□ 0.661e-7■■■□□ 15.5
LSM5-204ENST00000409909 POLIQ9UNA4 740 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 C2CD2Q9Y426 696 aa19.2■□□□□ 0.66
LSM5-204ENST00000409909 ARIH1Q9Y4X5 557 aaPredicted RBP19.2■□□□□ 0.66
LSM5-204ENST00000409909 SCN1AP35498 2009 aa19.19■□□□□ 0.66
LSM5-204ENST00000409909 XYLBO75191 536 aa19.19■□□□□ 0.66
LSM5-204ENST00000409909 LAMP2P13473 410 aa19.19■□□□□ 0.66
LSM5-204ENST00000409909 ATF2P15336 505 aa19.19■□□□□ 0.66
LSM5-204ENST00000409909 FSHRP23945 695 aa19.19■□□□□ 0.66
LSM5-204ENST00000409909 CASP1P29466 404 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms