RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 MCAMP43121 646 aa5.71□□□□□ -1.5
CLK1-203ENST00000409769 ANAPC15P60006 121 aa5.71□□□□□ -1.5
CLK1-203ENST00000409769 MXRA7P84157 204 aa5.71□□□□□ -1.5
CLK1-203ENST00000409769 CDK17Q00537 523 aa5.71□□□□□ -1.5
CLK1-203ENST00000409769 APBA1Q02410 837 aa5.71□□□□□ -1.5
CLK1-203ENST00000409769 ERCC6LQ2NKX8 1250 aa5.71□□□□□ -1.5
CLK1-203ENST00000409769 BRDTQ58F21 947 aaPredicted RBP5.71□□□□□ -1.5
CLK1-203ENST00000409769 ADGRG3Q86Y34 549 aa5.71□□□□□ -1.5
CLK1-203ENST00000409769 BEND2Q8NDZ0 799 aa5.71□□□□□ -1.5
CLK1-203ENST00000409769 RIN2Q8WYP3 895 aaPredicted RBP5.71□□□□□ -1.5
CLK1-203ENST00000409769 HOXB13Q92826 284 aaPredicted RBP5.71□□□□□ -1.5
CLK1-203ENST00000409769 FUBP3Q96I24 572 aaKnown RBP eCLIP5.71□□□□□ -1.56e-7■■□□□ 13.5
CLK1-203ENST00000409769 CDC5LQ99459 802 aaKnown RBP5.71□□□□□ -1.5
CLK1-203ENST00000409769 ZNF768Q9H5H4 540 aaKnown RBP5.71□□□□□ -1.5
CLK1-203ENST00000409769 RBM12Q9NTZ6 932 aaKnown RBP5.71□□□□□ -1.5
CLK1-203ENST00000409769 CHST2Q9Y4C5 530 aa5.71□□□□□ -1.5
CLK1-203ENST00000409769 CAMSAP1Q5T5Y3 1602 aa5.7□□□□□ -1.5
CLK1-203ENST00000409769 EFCAB6Q5THR3 1501 aa5.7□□□□□ -1.5
CLK1-203ENST00000409769 KIF3BO15066 747 aa5.7□□□□□ -1.5
CLK1-203ENST00000409769 IGBP1P78318 339 aa5.7□□□□□ -1.5
CLK1-203ENST00000409769 PPP3CAQ08209 521 aa5.7□□□□□ -1.5
CLK1-203ENST00000409769 MGAT2Q10469 447 aa5.7□□□□□ -1.5
CLK1-203ENST00000409769 BEAN1Q3B7T3 259 aa5.7□□□□□ -1.5
CLK1-203ENST00000409769 PGM2L1Q6PCE3 622 aa5.7□□□□□ -1.5
CLK1-203ENST00000409769 PDZD4Q76G19 769 aaPredicted RBP5.7□□□□□ -1.5
CLK1-203ENST00000409769 ZNF480Q8WV37 535 aa5.7□□□□□ -1.5
CLK1-203ENST00000409769 SLC9A6Q92581 669 aa5.7□□□□□ -1.5
CLK1-203ENST00000409769 MTMR8Q96EF0 704 aa5.7□□□□□ -1.5
CLK1-203ENST00000409769 CCDC8Q9H0W5 538 aaPredicted RBP5.7□□□□□ -1.5
CLK1-203ENST00000409769 BCO1Q9HAY6 547 aa5.7□□□□□ -1.5
CLK1-203ENST00000409769 MKS1Q9NXB0 559 aa5.7□□□□□ -1.5
CLK1-203ENST00000409769 GPRC5DQ9NZD1 345 aa5.7□□□□□ -1.5
CLK1-203ENST00000409769 DKK2Q9UBU2 259 aa5.7□□□□□ -1.5
CLK1-203ENST00000409769 SPHKAPQ2M3C7 1700 aa5.7□□□□□ -1.5
CLK1-203ENST00000409769 TNKSO95271 1327 aa5.7□□□□□ -1.5
CLK1-203ENST00000409769 ANKRD30BQ9BXX2 1392 aa5.69□□□□□ -1.5
CLK1-203ENST00000409769 KLHL33A6NCF5 533 aa5.69□□□□□ -1.5
CLK1-203ENST00000409769 PCDHGA12O60330 932 aa5.69□□□□□ -1.5
CLK1-203ENST00000409769 PRAMEF4O60810 478 aa5.69□□□□□ -1.5
CLK1-203ENST00000409769 NCR1O76036 304 aa5.69□□□□□ -1.5
CLK1-203ENST00000409769 HKR1P10072 659 aa5.69□□□□□ -1.5
CLK1-203ENST00000409769 ZSCAN20P17040 1043 aaPredicted RBP5.69□□□□□ -1.5
CLK1-203ENST00000409769 ABHD17BQ5VST6 288 aa5.69□□□□□ -1.5
CLK1-203ENST00000409769 OR7D4Q8NG98 312 aa5.69□□□□□ -1.5
CLK1-203ENST00000409769 NELL1Q92832 810 aa5.69□□□□□ -1.5
CLK1-203ENST00000409769 SPON1Q9HCB6 807 aa5.69□□□□□ -1.5
CLK1-203ENST00000409769 PCDHGA9Q9Y5G4 932 aaKnown RBP5.69□□□□□ -1.5
CLK1-203ENST00000409769 PCDHGA8Q9Y5G5 932 aa5.69□□□□□ -1.5
CLK1-203ENST00000409769 PCDHGA7Q9Y5G6 932 aa5.69□□□□□ -1.5
CLK1-203ENST00000409769 PCDHGA6Q9Y5G7 932 aa5.69□□□□□ -1.5
CLK1-203ENST00000409769 PCDHGA3Q9Y5H0 932 aa5.69□□□□□ -1.5
CLK1-203ENST00000409769 PCDHGA2Q9Y5H1 932 aa5.69□□□□□ -1.5
CLK1-203ENST00000409769 MRFAP1Q9Y605 127 aa5.69□□□□□ -1.5
CLK1-203ENST00000409769 CFAP65Q6ZU64 1925 aaKnown RBP5.69□□□□□ -1.5
CLK1-203ENST00000409769 PLA2R1Q13018 1463 aa5.69□□□□□ -1.5
CLK1-203ENST00000409769 RPRD2Q5VT52 1461 aaKnown RBP5.69□□□□□ -1.5
CLK1-203ENST00000409769 MROH2AA6NES4 1674 aa5.69□□□□□ -1.5
CLK1-203ENST00000409769 CLTCQ00610 1675 aaKnown RBP5.69□□□□□ -1.5
CLK1-203ENST00000409769 PTPRTO14522 1441 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 NPATQ14207 1427 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 ARHGAP31Q2M1Z3 1444 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 FAM171A2A8MVW0 826 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 ITGA10O75578 1167 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 MYBL2P10244 700 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 OSMP13725 252 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 FAM189BP81408 668 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 GUCY1B3Q02153 619 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 NHLH2Q02577 135 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 ABCB5Q2M3G0 1257 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 EFCAB12Q6NXP0 572 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 Q6ZVL8 140 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 STAG1Q8WVM7 1258 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 JADE3Q92613 823 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 BBC3Q96PG8 261 aaPredicted RBP5.68□□□□□ -1.5
CLK1-203ENST00000409769 ADI1Q9BV57 179 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 WDR11Q9BZH6 1224 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 SYNPO2LQ9H987 977 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 SYBUQ9NX95 663 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 DDX56Q9NY93 547 aaKnown RBP5.68□□□□□ -1.5
CLK1-203ENST00000409769 ZBTB21Q9ULJ3 1066 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 COX11Q9Y6N1 276 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 TRPM2O94759 1503 aa5.68□□□□□ -1.5
CLK1-203ENST00000409769 KANK1Q14678 1352 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 FER1L4A9Z1Z3 1794 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 ADAMTSL3P82987 1691 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 PREX1Q8TCU6 1659 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 PIPSLA2A3N6 862 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 TBKBP1A7MCY6 615 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 MASP2O00187 686 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 LEFTY2O00292 366 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 AKR1B10O60218 316 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 LPXNO60711 386 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 ENDOD1O94919 500 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 MT-CO1P00395 513 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 ECHS1P30084 290 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 C21orf58P58505 322 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 XYLT1Q86Y38 959 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.67□□□□□ -1.5
CLK1-203ENST00000409769 OR10H5Q8NGA6 315 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms