RNA–Protein interactions for RNA: ENST00000404276.5

CHEK2-208, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,785 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-208ENST00000404276 PAAF1Q9BRP4 392 aa11.21□□□□□ -0.62
CHEK2-208ENST00000404276 TTYH3Q9C0H2 523 aa11.21□□□□□ -0.62
CHEK2-208ENST00000404276 VRTNQ9H8Y1 702 aa11.21□□□□□ -0.62
CHEK2-208ENST00000404276 FAM207AQ9NSI2 230 aaPredicted RBP11.21□□□□□ -0.62
CHEK2-208ENST00000404276 AGAP1Q9UPQ3 857 aa11.21□□□□□ -0.62
CHEK2-208ENST00000404276 TRANK1O15050 2925 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 CASTOR2A6NHX0 329 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 TBKBP1A7MCY6 615 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 ZC3H11AO75152 810 aaKnown RBP eCLIP11.2□□□□□ -0.62
CHEK2-208ENST00000404276 STAU1O95793 577 aaKnown RBP11.2□□□□□ -0.62
CHEK2-208ENST00000404276 IGFBP6P24592 240 aaPredicted RBP11.2□□□□□ -0.62
CHEK2-208ENST00000404276 RPL9P32969 192 aaKnown RBP11.2□□□□□ -0.62
CHEK2-208ENST00000404276 CLCNKBP51801 687 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 TRPC3Q13507 836 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 UPP1Q16831 310 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 SGSM1Q2NKQ1 1148 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 FIGNQ5HY92 759 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 C9orf50Q5SZB4 431 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 KLHDC7AQ5VTJ3 777 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 SPOPLQ6IQ16 392 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 FAM117BQ6P1L5 589 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.2□□□□□ -0.62
CHEK2-208ENST00000404276 COLGALT2Q8IYK4 626 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 LRRC52Q8N7C0 313 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 PDLIM2Q96JY6 352 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 GDF15Q99988 308 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 LSM14BQ9BX40 385 aaKnown RBP11.2□□□□□ -0.62
CHEK2-208ENST00000404276 MRPL9Q9BYD2 267 aaKnown RBP11.2□□□□□ -0.62
CHEK2-208ENST00000404276 GANQ9H2C0 597 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 APOBEC3GQ9HC16 384 aaKnown RBP11.2□□□□□ -0.62
CHEK2-208ENST00000404276 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.2□□□□□ -0.628e-8■■■■■ 44.9
CHEK2-208ENST00000404276 HCSTQ9UBK5 93 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 APEX2Q9UBZ4 518 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 DNAJB4Q9UDY4 337 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 NUB1Q9Y5A7 615 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 SLC4A7Q9Y6M7 1214 aa11.2□□□□□ -0.62
CHEK2-208ENST00000404276 H0YGN5 161 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 SPTLC1O15269 473 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 GYPCP04921 128 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 UCHL3P15374 230 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 TRIM21P19474 475 aaKnown RBP11.19□□□□□ -0.62
CHEK2-208ENST00000404276 ATICP31939 592 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 NOP14P78316 857 aaKnown RBP11.19□□□□□ -0.62
CHEK2-208ENST00000404276 HTRA4P83105 476 aaPredicted RBP11.19□□□□□ -0.62
CHEK2-208ENST00000404276 RNASELQ05823 741 aaKnown RBP11.19□□□□□ -0.62
CHEK2-208ENST00000404276 LRMPQ12912 555 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 TBX2Q13207 712 aaPredicted RBP11.19□□□□□ -0.62
CHEK2-208ENST00000404276 ZNF699Q32M78 642 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 PAN2Q504Q3 1202 aaKnown RBP11.19□□□□□ -0.62
CHEK2-208ENST00000404276 GJB7Q6PEY0 223 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 TMC6Q7Z403 805 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 ARHGEF19Q8IW93 802 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 LRRC43Q8N309 656 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 C3orf58Q8NDZ4 430 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 PHOSPHO2Q8TCD6 241 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 RABGGTAQ92696 567 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 TAF4BQ92750 862 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 TATDN2Q93075 761 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 HPDLQ96IR7 371 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 SLC9A7Q96T83 725 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 NAA15Q9BXJ9 866 aaKnown RBP11.19□□□□□ -0.62
CHEK2-208ENST00000404276 NRDE2Q9H7Z3 1164 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 FBXL5Q9UKA1 691 aa11.19□□□□□ -0.62
CHEK2-208ENST00000404276 AJAP1Q9UKB5 411 aaPredicted RBP11.19□□□□□ -0.62
CHEK2-208ENST00000404276 RNF225M0QZC1 329 aaPredicted RBP11.18□□□□□ -0.62
CHEK2-208ENST00000404276 PODXLO00592 558 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 ATP2A2P16615 1042 aaKnown RBP11.18□□□□□ -0.62
CHEK2-208ENST00000404276 LILRA4P59901 499 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 SHHQ15465 462 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 WDR72Q3MJ13 1102 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 WDR44Q5JSH3 913 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 CD300LGQ6UXG3 332 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 HERC6Q8IVU3 1022 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 CMTR2Q8IYT2 770 aaKnown RBP11.18□□□□□ -0.62
CHEK2-208ENST00000404276 NEK11Q8NG66 645 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 DDX27Q96GQ7 796 aaKnown RBP11.18□□□□□ -0.62
CHEK2-208ENST00000404276 PCMTD1Q96MG8 357 aaPredicted RBP11.18□□□□□ -0.62
CHEK2-208ENST00000404276 UROC1Q96N76 676 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 NT5C1BQ96P26 610 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 IMPG2Q9BZV3 1241 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 MTIF3Q9H2K0 278 aaKnown RBP11.18□□□□□ -0.62
CHEK2-208ENST00000404276 FHOD1Q9Y613 1164 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 F8W810 466 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 PNPLA4P41247 253 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 ASPAP45381 313 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 AARSP49588 968 aaKnown RBP eCLIP11.18□□□□□ -0.62
CHEK2-208ENST00000404276 FXR1P51114 621 aaKnown RBP eCLIP11.18□□□□□ -0.62
CHEK2-208ENST00000404276 POLR2FP61218 127 aaKnown RBP11.18□□□□□ -0.62
CHEK2-208ENST00000404276 GCNT1Q02742 428 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 MYO1EQ12965 1108 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 IQCEQ6IPM2 695 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 RRAGAQ7L523 313 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 PPM1KQ8N3J5 372 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 ANP32BQ92688 251 aaKnown RBP11.18□□□□□ -0.62
CHEK2-208ENST00000404276 KAT5Q92993 513 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 FAXDC2Q96IV6 333 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 KREMEN1Q96MU8 473 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 YME1L1Q96TA2 773 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 ARID3AQ99856 593 aa11.18□□□□□ -0.62
CHEK2-208ENST00000404276 NUP58Q9BVL2 599 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms