RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 AK8Q96MA6 479 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 PADI4Q9UM07 663 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 CDYLQ9Y232 598 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 C3orf70A6NLC5 250 aaPredicted RBP12.91□□□□□ -0.34
SMU1-201ENST00000397149 H2AFYO75367 372 aaKnown RBP12.91□□□□□ -0.34
SMU1-201ENST00000397149 MYBL1P10243 752 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 ATP5JP18859 108 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 TMEM62Q0P6H9 643 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 STX4Q12846 297 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 TRIP10Q15642 601 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 ZNF57Q68EA5 555 aaPredicted RBP12.91□□□□□ -0.34
SMU1-201ENST00000397149 NFRKBQ6P4R8 1299 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 PHACTR4Q8IZ21 702 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 ATPAF2Q8N5M1 289 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 FAM45AQ8TCE6 357 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 IP6K2Q9UHH9 426 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 AVPR1AP37288 418 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 GSSP48637 474 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 NCF4Q15080 339 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 ARMC4Q5T2S8 1044 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 GATAD2AQ86YP4 633 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 ZHX2Q9Y6X8 837 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 CC2D2AQ9P2K1 1620 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 PCNAP12004 261 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 PTPN1P18031 435 aaKnown RBP12.91□□□□□ -0.34
SMU1-201ENST00000397149 ZBED6P86452 979 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 TAF13Q15543 124 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 ARMCX4Q5H9R4 360 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 TIGD7Q6NT04 549 aaPredicted RBP12.91□□□□□ -0.34
SMU1-201ENST00000397149 IP6K1Q92551 441 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 SPATA33Q96N06 139 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 DDX47Q9H0S4 455 aaKnown RBP12.91□□□□□ -0.34
SMU1-201ENST00000397149 GREM2Q9H772 168 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 SENP2Q9HC62 589 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 RWDD2AQ9UIY3 292 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 PIN4Q9Y237 131 aaKnown RBP12.91□□□□□ -0.34
SMU1-201ENST00000397149 EHBP1L1Q8N3D4 1523 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 PDZK1P1A8MUH7 402 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 MYL2P10916 166 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 CCDC130P13994 396 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 MFSD14CQ5VZR4 134 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 UBASH3BQ8TF42 649 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 CYFIP2Q96F07 1278 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 STN1Q9H668 368 aaKnown RBP12.9□□□□□ -0.34
SMU1-201ENST00000397149 ZNF302Q9NR11 478 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 SLC9A8Q9Y2E8 581 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 SNX8Q9Y5X2 465 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 ARAP1Q96P48 1450 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 LOC100653049A0A140TA62 436 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 KRT34O76011 436 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 FTLP02792 175 aaPredicted RBP12.9□□□□□ -0.34
SMU1-201ENST00000397149 HOXD10P28358 340 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 ESRP1Q6NXG1 681 aaKnown RBP12.9□□□□□ -0.34
SMU1-201ENST00000397149 NFKBIZQ9BYH8 718 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 WWP1Q9H0M0 922 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 OSGEPL1Q9H4B0 414 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 NDOR1Q9UHB4 597 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 ADCY9O60503 1353 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 KIF28PB7ZC32 967 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 SPTLC1O15269 473 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 PRKAB2O43741 272 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 TSPAN9O75954 239 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 ENDOD1O94919 500 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 RARBP10826 455 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 RRM2P31350 389 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 DMTNQ08495 405 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 TTC33Q6PID6 262 aaPredicted RBP12.9□□□□□ -0.34
SMU1-201ENST00000397149 IPMKQ8NFU5 416 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 SEPT3Q9UH03 358 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 HEATR9A2RTY3 570 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 NEURL1BA8MQ27 555 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 GRAP2O75791 330 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 MFN2O95140 757 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 SNUPNO95149 360 aaKnown RBP12.9□□□□□ -0.34
SMU1-201ENST00000397149 CPA2P48052 419 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 KIF23Q02241 960 aaPredicted RBP12.9□□□□□ -0.34
SMU1-201ENST00000397149 PKP1Q13835 747 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 FAM83BQ5T0W9 1011 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 TRIM65Q6PJ69 517 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 CD109Q6YHK3 1445 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 MMGT1Q8N4V1 131 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 VPS37AQ8NEZ2 397 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 DDI1Q8WTU0 396 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 SPIRE2Q8WWL2 714 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 S100A13Q99584 98 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 POLR1BQ9H9Y6 1135 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 AREL1O15033 823 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 RGS2P41220 211 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 CYP51A1Q16850 503 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 B3GALNT2Q8NCR0 500 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 TRPC4APQ8TEL6 797 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 KAT2BQ92831 832 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 FAM129BQ96TA1 746 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 MMP19Q99542 508 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 SPACA6W5XKT8 324 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 AATKQ6ZMQ8 1374 aa12.9□□□□□ -0.34
SMU1-201ENST00000397149 POU4F1Q01851 419 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 PCYOX1LQ8NBM8 494 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 SNF8Q96H20 258 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 WWOXQ9NZC7 414 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms