RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 GTF2IP78347 998 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 ARHGAP17Q68EM7 881 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 NDUFAF2Q8N183 169 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 EGFL8Q99944 293 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 CASS4Q9NQ75 786 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 NUP153P49790 1475 aaKnown RBP13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 TSPAN9O75954 239 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 PEX3P56589 373 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 GEMIN4P57678 1058 aaKnown RBP13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 C16orf72Q14CZ0 275 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 PFKFB3Q16875 520 aaPredicted RBP13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 TRAPPC11Q7Z392 1133 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 RSPH1Q8WYR4 309 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 F8VZ95 297 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 STK25O00506 426 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 NFKBIAP25963 317 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 C21orf59P57076 290 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 CTTNQ14247 550 aaKnown RBP13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 USP17L2Q6R6M4 530 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 TMC4Q7Z404 712 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 DDX18Q9NVP1 670 aaKnown RBP13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 PSAPP07602 524 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 FAM58BPP0C7Q3 252 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 MAGEA4P43358 317 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 UBE2SQ16763 222 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 C1orf228Q6PIY5 440 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 LCORLQ8N3X6 602 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 PGBD4Q96DM1 585 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 SPATA17Q96L03 361 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 SLC5A4Q9NY91 659 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 HEY2Q9UBP5 337 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 POTEMA6NI47 508 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 CLDN3O15551 220 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 C19orf18Q8NEA5 215 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 CABLES1Q8TDN4 633 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 JADE3Q92613 823 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 PABPC3Q9H361 631 aaKnown RBP13□□□□□ -0.33
SRGAP3-202ENST00000383836 PCSK1NQ9UHG2 260 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 PRG3Q9Y2Y8 225 aaPredicted RBP13□□□□□ -0.33
SRGAP3-202ENST00000383836 RFX7Q2KHR2 1363 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 STX7O15400 261 aaKnown RBP13□□□□□ -0.33
SRGAP3-202ENST00000383836 PPIDQ08752 370 aaKnown RBP13□□□□□ -0.33
SRGAP3-202ENST00000383836 ARHGEF26Q96DR7 871 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 TUBA8Q9NY65 449 aaPredicted RBP13□□□□□ -0.33
SRGAP3-202ENST00000383836 AIPL1Q9NZN9 384 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 GRID1Q9ULK0 1009 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 SDC4P31431 198 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 PTPN12Q05209 780 aaKnown RBP13□□□□□ -0.33
SRGAP3-202ENST00000383836 WASHC2DQ5SRD0 308 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 C6orf10Q5SRN2 563 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 PPP2R3CQ969Q6 453 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 GPR101Q96P66 508 aaPredicted RBP13□□□□□ -0.33
SRGAP3-202ENST00000383836 SARS2Q9NP81 518 aaKnown RBP13□□□□□ -0.33
SRGAP3-202ENST00000383836 H2AFYO75367 372 aaKnown RBP13□□□□□ -0.33
SRGAP3-202ENST00000383836 GYPCP04921 128 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 SNRPAP09012 282 aaKnown RBP13□□□□□ -0.33
SRGAP3-202ENST00000383836 NLRP9Q7RTR0 991 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 E9PCH4 1651 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 UTYO14607 1347 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 DGKIO75912 1065 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 LRRC74BQ6ZQY2 392 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 CYTH3O43739 400 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 ANGPT1Q15389 498 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 DLGAP5Q15398 846 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 MCRS1Q96EZ8 462 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 TSPAN17Q96FV3 270 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 CLEC4MQ9H2X3 399 aaPredicted RBP13□□□□□ -0.33
SRGAP3-202ENST00000383836 GREM2Q9H772 168 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 SMARCAL1Q9NZC9 954 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 MBD2Q9UBB5 411 aa13□□□□□ -0.33
SRGAP3-202ENST00000383836 PTPN4P29074 926 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 OSTNP61366 133 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 PSMC6P62333 389 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 FAM47CQ5HY64 1035 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 ANKRD40Q6AI12 368 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 RAD9BQ6WBX8 426 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 UVRAGQ9P2Y5 699 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 GJA3Q9Y6H8 435 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 FXR1P51114 621 aaKnown RBP eCLIP12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 CDH6P55285 790 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 LAMC2Q13753 1193 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 TNFAIP1Q13829 316 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 WNK4Q96J92 1243 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 STK33Q9BYT3 514 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 RABGEF1Q9UJ41 708 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 MYO5BQ9ULV0 1848 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 ERVV-2B6SEH9 535 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 KRT76Q01546 638 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 KCNMA1Q12791 1236 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 DCTN2Q13561 401 aaKnown RBP12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 MAPRE1Q15691 268 aaKnown RBP12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 IFNEQ86WN2 208 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 FAM81AQ8TBF8 368 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 C9orf72Q96LT7 481 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 AGPAT5Q9NUQ2 364 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 C1orf232A0A0U1RR37 186 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 UBOX5O94941 541 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 ATP2C1P98194 919 aaPredicted RBP12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 NDUFA5Q16718 116 aa12.99□□□□□ -0.33
SRGAP3-202ENST00000383836 TXNRD1Q16881 649 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms