RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 KLF1Q13351 362 aaPredicted RBP13.48□□□□□ -0.25
PUDP-201ENST00000381077 SLC29A2Q14542 456 aa13.48□□□□□ -0.25
PUDP-201ENST00000381077 MXD4Q14582 209 aaPredicted RBP13.48□□□□□ -0.25
PUDP-201ENST00000381077 ERMARDQ5T6L9 678 aa13.48□□□□□ -0.25
PUDP-201ENST00000381077 IER5Q5VY09 327 aa13.48□□□□□ -0.25
PUDP-201ENST00000381077 CDCA2Q69YH5 1023 aaPredicted RBP13.48□□□□□ -0.25
PUDP-201ENST00000381077 TTC19Q6DKK2 380 aaPredicted RBP13.48□□□□□ -0.25
PUDP-201ENST00000381077 DRICH1Q6PGQ1 229 aaPredicted RBP13.48□□□□□ -0.25
PUDP-201ENST00000381077 C6orf89Q6UWU4 347 aa13.48□□□□□ -0.25
PUDP-201ENST00000381077 ANKRD35Q8N283 1001 aa13.48□□□□□ -0.25
PUDP-201ENST00000381077 OTUD6BQ8N6M0 293 aa13.48□□□□□ -0.25
PUDP-201ENST00000381077 UBR7Q8N806 425 aa13.48□□□□□ -0.25
PUDP-201ENST00000381077 CCDC89Q8N998 374 aa13.48□□□□□ -0.25
PUDP-201ENST00000381077 PROCA1Q8NCQ7 364 aaPredicted RBP13.48□□□□□ -0.25
PUDP-201ENST00000381077 CYFIP2Q96F07 1278 aa13.48□□□□□ -0.25
PUDP-201ENST00000381077 SERPINB12Q96P63 405 aa13.48□□□□□ -0.25
PUDP-201ENST00000381077 TRAIPQ9BWF2 469 aa13.48□□□□□ -0.25
PUDP-201ENST00000381077 C2orf40Q9H1Z8 148 aa13.48□□□□□ -0.25
PUDP-201ENST00000381077 ADAM22Q9P0K1 906 aa13.48□□□□□ -0.25
PUDP-201ENST00000381077 BCCIPQ9P287 314 aaKnown RBP eCLIP13.48□□□□□ -0.25
PUDP-201ENST00000381077 IP6K2Q9UHH9 426 aa13.48□□□□□ -0.25
PUDP-201ENST00000381077 SCAF8Q9UPN6 1271 aaKnown RBP13.48□□□□□ -0.25
PUDP-201ENST00000381077 GJA3Q9Y6H8 435 aa13.48□□□□□ -0.25
PUDP-201ENST00000381077 CLDN3O15551 220 aa13.47□□□□□ -0.25
PUDP-201ENST00000381077 SORBS3O60504 671 aa13.47□□□□□ -0.25
PUDP-201ENST00000381077 CAND2O75155 1236 aa13.47□□□□□ -0.25
PUDP-201ENST00000381077 TOM1L1O75674 476 aa13.47□□□□□ -0.25
PUDP-201ENST00000381077 FSBPO95073 299 aa13.47□□□□□ -0.25
PUDP-201ENST00000381077 CALB1P05937 261 aa13.47□□□□□ -0.25
PUDP-201ENST00000381077 PTPN7P35236 360 aa13.47□□□□□ -0.25
PUDP-201ENST00000381077 COPS2P61201 443 aa13.47□□□□□ -0.25
PUDP-201ENST00000381077 SP2Q02086 613 aa13.47□□□□□ -0.25
PUDP-201ENST00000381077 KRT17Q04695 432 aa13.47□□□□□ -0.25
PUDP-201ENST00000381077 MCL1Q07820 350 aa13.47□□□□□ -0.25
PUDP-201ENST00000381077 METTL7BQ6UX53 244 aa13.47□□□□□ -0.25
PUDP-201ENST00000381077 TRMT1LQ7Z2T5 733 aaKnown RBP13.47□□□□□ -0.25
PUDP-201ENST00000381077 SEPT1Q8WYJ6 367 aa13.47□□□□□ -0.25
PUDP-201ENST00000381077 RBM41Q96IZ5 413 aaKnown RBP13.47□□□□□ -0.25
PUDP-201ENST00000381077 BTBD6Q96KE9 485 aa13.47□□□□□ -0.25
PUDP-201ENST00000381077 PI4K2AQ9BTU6 479 aa13.47□□□□□ -0.25
PUDP-201ENST00000381077 MRPL4Q9BYD3 311 aaKnown RBP13.47□□□□□ -0.25
PUDP-201ENST00000381077 DCLK3Q9C098 648 aa13.47□□□□□ -0.25
PUDP-201ENST00000381077 PCDHB4Q9Y5E5 795 aa13.47□□□□□ -0.25
PUDP-201ENST00000381077 UMODL1Q5DID0 1318 aa13.47□□□□□ -0.25
PUDP-201ENST00000381077 PTPRFP10586 1907 aa13.46□□□□□ -0.25
PUDP-201ENST00000381077 UBA1P22314 1058 aaKnown RBP13.46□□□□□ -0.25
PUDP-201ENST00000381077 YWHAEP62258 255 aaKnown RBP13.46□□□□□ -0.25
PUDP-201ENST00000381077 TTC31Q49AM3 519 aaPredicted RBP13.46□□□□□ -0.25
PUDP-201ENST00000381077 RBBP8NLQ8NC74 664 aaPredicted RBP13.46□□□□□ -0.25
PUDP-201ENST00000381077 ACTR5Q9H9F9 607 aaPredicted RBP13.46□□□□□ -0.25
PUDP-201ENST00000381077 GPRC5DQ9NZD1 345 aa13.46□□□□□ -0.25
PUDP-201ENST00000381077 GSTTP1A0A1W2PQM5 241 aa13.46□□□□□ -0.26
PUDP-201ENST00000381077 TCRBV7S2A1N4TA0A589 114 aa13.46□□□□□ -0.26
PUDP-201ENST00000381077 RASGRF2O14827 1237 aa13.46□□□□□ -0.26
PUDP-201ENST00000381077 ASS1P00966 412 aaKnown RBP13.46□□□□□ -0.26
PUDP-201ENST00000381077 CDH5P33151 784 aaPredicted RBP13.46□□□□□ -0.26
PUDP-201ENST00000381077 ACOT2P49753 483 aa13.46□□□□□ -0.26
PUDP-201ENST00000381077 SLC26A2P50443 739 aa13.46□□□□□ -0.26
PUDP-201ENST00000381077 STAT5BP51692 787 aa13.46□□□□□ -0.26
PUDP-201ENST00000381077 MAMLD1Q13495 774 aa13.46□□□□□ -0.26
PUDP-201ENST00000381077 NCOA4Q13772 614 aa13.46□□□□□ -0.26
PUDP-201ENST00000381077 FEZF2Q8TBJ5 459 aa13.46□□□□□ -0.26
PUDP-201ENST00000381077 IPO4Q8TEX9 1081 aaKnown RBP13.46□□□□□ -0.26
PUDP-201ENST00000381077 RAPGEF5Q92565 580 aa13.46□□□□□ -0.26
PUDP-201ENST00000381077 TMEM143Q96AN5 459 aa13.46□□□□□ -0.26
PUDP-201ENST00000381077 XPO6Q96QU8 1125 aaKnown RBP13.46□□□□□ -0.26
PUDP-201ENST00000381077 SEMA4AQ9H3S1 761 aa13.46□□□□□ -0.26
PUDP-201ENST00000381077 APOBEC3GQ9HC16 384 aaKnown RBP13.46□□□□□ -0.26
PUDP-201ENST00000381077 PAPPA2Q9BXP8 1791 aa13.46□□□□□ -0.26
PUDP-201ENST00000381077 SLC25A27O95847 323 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 MMP8P22894 467 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 IVDP26440 423 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 CAPSQ13938 189 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 GKAP1Q5VSY0 366 aaPredicted RBP13.45□□□□□ -0.26
PUDP-201ENST00000381077 TMEM270Q6UE05 265 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 ZBTB8OSQ8IWT0 167 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 RCOR2Q8IZ40 523 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 GPC2Q8N158 579 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 CPA5Q8WXQ8 436 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 CHMP6Q96FZ7 201 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 TARS2Q9BW92 718 aaKnown RBP13.45□□□□□ -0.26
PUDP-201ENST00000381077 HAPLN2Q9GZV7 340 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 CCDC113Q9H0I3 377 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 FAM124BQ9H5Z6 455 aaPredicted RBP13.45□□□□□ -0.26
PUDP-201ENST00000381077 PPANQ9NQ55 473 aaKnown RBP13.45□□□□□ -0.26
PUDP-201ENST00000381077 PCDHGC3Q9UN70 934 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 NEU2Q9Y3R4 380 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 LRRC37A2A6NM11 1700 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 IGKV6-21A0A0C4DH24 114 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 IRF6O14896 467 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 OGTO15294 1046 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 ASAP2O43150 1006 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 LGR5O75473 907 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 SHBGP04278 402 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 ATF2P15336 505 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 EIF4BP23588 611 aaKnown RBP13.45□□□□□ -0.26
PUDP-201ENST00000381077 SEC24CP53992 1094 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 SP4Q02446 784 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 SGSM1Q2NKQ1 1148 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 PLPPR4Q7Z2D5 763 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms