RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 PNPLA4P41247 253 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 CASP5P51878 434 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 CAPSQ13938 189 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 MTF1Q14872 753 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 EEF1DP3Q658K8 133 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 PLPPR4Q7Z2D5 763 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 KIAA0895Q8NCT3 520 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 ZNF564Q8TBZ8 553 aaPredicted RBP8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 ZIC5Q96T25 663 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 KRT12Q99456 494 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 AGPAT1Q99943 283 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 MKNK1Q9BUB5 465 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 UNC93B1Q9H1C4 597 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 SAMD15Q9P1V8 674 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 SLC4A7Q9Y6M7 1214 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 BTAF1O14981 1849 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 PI4K2BG5E9Z4 385 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 ZMYND10O75800 440 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 MYL4P12829 197 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 CCL5P13501 91 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 NCAM1P13591 858 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 CTNNB1P35222 781 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 ACLYP53396 1101 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 SEPT6Q14141 434 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 C1orf186Q6ZWK4 172 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 KDELC2Q7Z4H8 507 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 ZNF410Q86VK4 478 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 ADGRF2Q8IZF7 708 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 CYFIP2Q96F07 1278 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 STK33Q9BYT3 514 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 IKZF4Q9H2S9 585 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 KANSL3Q9P2N6 904 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 MSRAQ9UJ68 235 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 PASKQ96RG2 1323 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 FOXN3O00409 490 aaPredicted RBP8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 ATMINO43313 823 aaPredicted RBP8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 RRP9O43818 475 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 ZBED1O96006 694 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 FXR1P51114 621 aaKnown RBP eCLIP8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 PMS1P54277 932 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 SMAD1Q15797 465 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 GOLGA7BQ2TAP0 167 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 ABHD15Q6UXT9 468 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 IFT20Q8IY31 132 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 TNS4Q8IZW8 715 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 OLFML3Q9NRN5 406 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 SMPD4Q9NXE4 827 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 HPCAL4Q9UM19 191 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 SCAMP3O14828 347 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 MAFO75444 373 aaPredicted RBP8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 SPATA31C1P0DKV0 1188 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 KCNA2P16389 499 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 KRT15P19012 456 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 CDH6P55285 790 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 SF3A3Q12874 501 aaKnown RBP eCLIP8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 CST9Q5W186 159 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 PPP1R2P3Q6NXS1 205 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 ARHGEF18Q6ZSZ5 1173 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 RHOT2Q8IXI1 618 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 DBF4BQ8NFT6 615 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 DNAJC17Q9NVM6 304 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 SH3BP1Q9Y3L3 701 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 CHD4Q14839 1912 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 RIOK3O14730 519 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 ADAMTS3O15072 1205 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 PALMO75781 387 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 HPDP32754 393 aaPredicted RBP8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 YWHAGP61981 247 aaKnown RBP eCLIP8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 EFHC2Q5JST6 749 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 ZNF280DQ6N043 979 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 ABRAQ8N0Z2 381 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 SLC7A14Q8TBB6 771 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 SREK1Q8WXA9 508 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 DDX43Q9NXZ2 648 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 MRPL42Q9Y6G3 142 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 CYP3A7-CYP3A51PA0A087WV96 503 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 ARIH2O95376 493 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 CYP3A7P24462 503 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 SLC12A3P55017 1021 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 RWDD2BP57060 319 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 CYP24A1Q07973 514 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 IL17AQ16552 155 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 OLFML2BQ68BL8 750 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 JADE1Q6IE81 842 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 TTC30BQ8N4P2 665 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 GABPB2Q8TAK5 448 aaPredicted RBP8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 TATDN2Q93075 761 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 PANX2Q96RD6 677 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 CCDC68Q9H2F9 335 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 LSM7Q9UK45 103 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 PADI3Q9ULW8 664 aa8.97□□□□□ -0.97
CRNKL1-202ENST00000377340 ZNF862O60290 1169 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 NFASCO94856 1347 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 MCF2P10911 925 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 RAB27AP51159 221 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 SEMA3FQ13275 785 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 CUL2Q13617 745 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 FRMPD4Q14CM0 1322 aa8.96□□□□□ -0.97
CRNKL1-202ENST00000377340 IQCB1Q15051 598 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms