RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 VARS2Q5ST30 1063 aaKnown RBP13.56□□□□□ -0.24
MRPL55-209ENST00000366735 NT5DC1Q5TFE4 455 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 LARP1BQ659C4 914 aaKnown RBP13.56□□□□□ -0.24
MRPL55-209ENST00000366735 SLC8B1Q6J4K2 584 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 ZNF280DQ6N043 979 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 ZNF852Q6ZMS4 543 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 TPRG1Q6ZUI0 275 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 KIAA2013Q8IYS2 634 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 GPR161Q8N6U8 529 aaKnown RBP13.56□□□□□ -0.24
MRPL55-209ENST00000366735 LEMD2Q8NC56 503 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 FBXO18Q8NFZ0 1043 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 ING5Q8WYH8 240 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 ELSPBP1Q96BH3 223 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 TCHPQ9BT92 498 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 IER2Q9BTL4 223 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 RPP25Q9BUL9 199 aaKnown RBP13.56□□□□□ -0.24
MRPL55-209ENST00000366735 GOLGA2P5Q9HBQ8 144 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 LTB4R2Q9NPC1 389 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 HCFC1R1Q9NWW0 138 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 NCDNQ9UBB6 729 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 MAFFQ9ULX9 164 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 MTMR6Q9Y217 621 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 PCDHGA2Q9Y5H1 932 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 ZNF638Q14966 1978 aaKnown RBP13.56□□□□□ -0.24
MRPL55-209ENST00000366735 DCHS1Q96JQ0 3298 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 FAM170BA6NMN3 283 aa13.55□□□□□ -0.24
MRPL55-209ENST00000366735 EDN1P05305 212 aa13.55□□□□□ -0.24
MRPL55-209ENST00000366735 BRCC3P46736 316 aa13.55□□□□□ -0.24
MRPL55-209ENST00000366735 NPTX2P47972 431 aa13.55□□□□□ -0.24
MRPL55-209ENST00000366735 TPGS2Q68CL5 300 aa13.55□□□□□ -0.24
MRPL55-209ENST00000366735 IQCEQ6IPM2 695 aa13.55□□□□□ -0.24
MRPL55-209ENST00000366735 MPZL3Q6UWV2 235 aa13.55□□□□□ -0.24
MRPL55-209ENST00000366735 PDZD4Q76G19 769 aaPredicted RBP13.55□□□□□ -0.24
MRPL55-209ENST00000366735 DGLUCYQ7Z3D6 616 aa13.55□□□□□ -0.24
MRPL55-209ENST00000366735 APPL2Q8NEU8 664 aa13.55□□□□□ -0.24
MRPL55-209ENST00000366735 ST13P5Q8NFI4 369 aaPredicted RBP13.55□□□□□ -0.24
MRPL55-209ENST00000366735 ATRIPQ8WXE1 791 aa13.55□□□□□ -0.24
MRPL55-209ENST00000366735 ACO2Q99798 780 aaKnown RBP13.55□□□□□ -0.24
MRPL55-209ENST00000366735 CYP4F11Q9HBI6 524 aa13.55□□□□□ -0.24
MRPL55-209ENST00000366735 CNTN3Q9P232 1028 aa13.55□□□□□ -0.24
MRPL55-209ENST00000366735 ARHGAP28Q9P2N2 729 aa13.55□□□□□ -0.24
MRPL55-209ENST00000366735 USP20Q9Y2K6 914 aa13.55□□□□□ -0.24
MRPL55-209ENST00000366735 COL4A3Q01955 1670 aa13.55□□□□□ -0.24
MRPL55-209ENST00000366735 TSC2P49815 1807 aa13.55□□□□□ -0.24
MRPL55-209ENST00000366735 WDR27A2RRH5 827 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 H0YCG3 227 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 I3L4J1 428 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 MAN2B1O00754 1011 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 HIP1RO75146 1068 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 MICAL2O94851 1124 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 GLULP15104 373 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 ATF2P15336 505 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 KCNE1P15382 129 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 PTMSP20962 102 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 SDHBP21912 280 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 RPS9P46781 194 aaKnown RBP13.54□□□□□ -0.24
MRPL55-209ENST00000366735 SMTNP53814 917 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 ARPP19P56211 112 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 OSTNP61366 133 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 PUM1Q14671 1186 aaKnown RBP eCLIP13.54□□□□□ -0.24
MRPL55-209ENST00000366735 NOLC1Q14978 699 aaKnown RBP eCLIP13.54□□□□□ -0.24
MRPL55-209ENST00000366735 XKR4Q5GH76 650 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 CYP4A22Q5TCH4 519 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 TCEAL8Q8IYN2 117 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 KCTD17Q8N5Z5 321 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 CEP120Q8N960 986 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 IGSF22Q8N9C0 903 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 C3orf58Q8NDZ4 430 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 MCRS1Q96EZ8 462 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 OXCT2Q9BYC2 517 aaPredicted RBP13.54□□□□□ -0.24
MRPL55-209ENST00000366735 FAM126AQ9BYI3 521 aaPredicted RBP13.54□□□□□ -0.24
MRPL55-209ENST00000366735 CXCL16Q9H2A7 254 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 ZFP14Q9HCL3 533 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 INSL5Q9Y5Q6 135 aa13.54□□□□□ -0.24
MRPL55-209ENST00000366735 XPOTO43592 962 aaKnown RBP13.53□□□□□ -0.24
MRPL55-209ENST00000366735 ABLIM3O94929 683 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 HARSP12081 509 aaKnown RBP13.53□□□□□ -0.24
MRPL55-209ENST00000366735 CPB1P15086 417 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 CEBPBP17676 345 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 MARCKSP29966 332 aaPredicted RBP13.53□□□□□ -0.24
MRPL55-209ENST00000366735 PRPHP41219 470 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 MATR3P43243 847 aaKnown RBP eCLIP13.53□□□□□ -0.24
MRPL55-209ENST00000366735 CSTF1Q05048 431 aaKnown RBP13.53□□□□□ -0.24
MRPL55-209ENST00000366735 ADCY1Q08828 1119 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 PLD1Q13393 1074 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 ECM1Q16610 540 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 CTXN3Q4LDR2 81 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 ALKAL1Q6UXT8 129 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 DTHD1Q6ZMT9 781 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 DEPDC1BQ8WUY9 529 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 IRF7Q92985 503 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 ZNF512Q96ME7 567 aaPredicted RBP13.53□□□□□ -0.24
MRPL55-209ENST00000366735 CORO1BQ9BR76 489 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 BRD9Q9H8M2 597 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 PTPRHQ9HD43 1115 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 ASAH2Q9NR71 780 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 ZSCAN32Q9NX65 697 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 ANKFY1Q9P2R3 1169 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 ATP6V1DQ9Y5K8 247 aa13.53□□□□□ -0.24
MRPL55-209ENST00000366735 OTOGLQ3ZCN5 2332 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms