RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 TMEM169Q96HH4 297 aa19.57■□□□□ 0.72
CLIP2-202ENST00000361545 APRTP07741 180 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 SHMT1P34896 483 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 MAGOHP61326 146 aaKnown RBP19.56■□□□□ 0.72
CLIP2-202ENST00000361545 MKRN4PQ13434 485 aaPredicted RBP19.56■□□□□ 0.72
CLIP2-202ENST00000361545 ASAP3Q8TDY4 903 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 MS4A14Q96JA4 679 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 TRIM55Q9BYV6 548 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 ADGRB1O14514 1584 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 DMTNQ08495 405 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 ORC1Q13415 861 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 ZNF484Q5JVG2 852 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 GBP5Q96PP8 586 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 MKNK1Q9BUB5 465 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 INTUQ9ULD6 942 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 UBQLN1Q9UMX0 589 aaKnown RBP19.56■□□□□ 0.72
CLIP2-202ENST00000361545 GPR182O15218 404 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 ZNF185O15231 689 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 GYS2P54840 703 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 FASTKD1Q53R41 847 aaKnown RBP19.56■□□□□ 0.72
CLIP2-202ENST00000361545 CYP4A22Q5TCH4 519 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 BHMTQ93088 406 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 WDR24Q96S15 920 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 FAM118BQ9BPY3 351 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 TRPV6Q9H1D0 765 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 TAF1DQ9H5J8 278 aaPredicted RBP19.56■□□□□ 0.72
CLIP2-202ENST00000361545 C3orf70A6NLC5 250 aaPredicted RBP19.56■□□□□ 0.72
CLIP2-202ENST00000361545 GAS2O43903 313 aaKnown RBP19.56■□□□□ 0.72
CLIP2-202ENST00000361545 ZNF286BP0CG31 522 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 NCAM1P13591 858 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 PDCLQ13371 301 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 LBRQ14739 615 aaKnown RBP19.56■□□□□ 0.72
CLIP2-202ENST00000361545 C10orf120Q5SQS8 335 aa19.56■□□□□ 0.72
CLIP2-202ENST00000361545 SYTL5Q8TDW5 730 aaPredicted RBP19.56■□□□□ 0.72
CLIP2-202ENST00000361545 SMTNL2Q2TAL5 461 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 CLEC17AQ6ZS10 378 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 RASGRP2Q7LDG7 609 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 ATL2Q8NHH9 583 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 C17orf75Q9HAS0 396 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 ATICP31939 592 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 EFHD1Q9BUP0 239 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 SNRPFP62306 86 aaKnown RBP19.55■□□□□ 0.72
CLIP2-202ENST00000361545 PIGHQ14442 188 aaPredicted RBP19.55■□□□□ 0.72
CLIP2-202ENST00000361545 NR1I3Q14994 352 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 HIF1AQ16665 826 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 KCTD17Q8N5Z5 321 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 SLITRK1Q96PX8 696 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 ADAM33Q9BZ11 813 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 DRC3Q9H069 523 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 TXLNGQ9NUQ3 528 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 EHD2Q9NZN4 543 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 ZFATQ9P243 1243 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 ORC6Q9Y5N6 252 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 FAM200BP0CF97 657 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 HSPA8P11142 646 aaKnown RBP19.55■□□□□ 0.72
CLIP2-202ENST00000361545 GGCXP38435 758 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 SEC23AQ15436 765 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 PDCD2LQ9BRP1 358 aa19.55■□□□□ 0.72
CLIP2-202ENST00000361545 CSDE1O75534 798 aaKnown RBP19.54■□□□□ 0.72
CLIP2-202ENST00000361545 PNMA6AP0CW24 399 aaPredicted RBP19.54■□□□□ 0.72
CLIP2-202ENST00000361545 HIPK4Q8NE63 616 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 SPATA4Q8NEY3 305 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 CPB2Q96IY4 423 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 APOBEC2Q9Y235 224 aaKnown RBP19.54■□□□□ 0.72
CLIP2-202ENST00000361545 SSU72P8A0A1W2PR75 194 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 STAG3L1P0CL83 205 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 CBWD2Q8IUF1 395 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 GPC2Q8N158 579 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 DCUN1D1Q96GG9 259 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 TRAIPQ9BWF2 469 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 DDX4Q9NQI0 724 aaKnown RBP19.54■□□□□ 0.72
CLIP2-202ENST00000361545 TRIM10Q9UDY6 481 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 MAPK13O15264 365 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 BRAFP15056 766 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 FGFR4P22455 802 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 ACADSBP45954 432 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 MMP14P50281 582 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 NR1H3Q13133 447 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 PCSK7Q16549 785 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 EFHBQ8N7U6 833 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 ARRDC4Q8NCT1 418 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 STARD7Q9NQZ5 370 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 PNPLA4P41247 253 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 NCLNQ969V3 563 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 CLMNQ96JQ2 1002 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 RAB6BQ9NRW1 208 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 USH1CQ9Y6N9 552 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 AK9Q5TCS8 1911 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 OGTO15294 1046 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 NPTX2P47972 431 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 CASP4P49662 377 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 LY6KQ17RY6 165 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 PCNX4Q63HM2 1172 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 TRIM54Q9BYV2 358 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 MTMR12Q9C0I1 747 aa19.54■□□□□ 0.72
CLIP2-202ENST00000361545 METTL5Q9NRN9 209 aaKnown RBP19.54■□□□□ 0.72
CLIP2-202ENST00000361545 DSG3P32926 999 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 KLHDC7AQ5VTJ3 777 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 CHSY1Q86X52 802 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 PPHLN1Q8NEY8 458 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms