RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 RHOT2Q8IXI1 618 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 REPS2Q8NFH8 660 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 ATG4AQ8WYN0 398 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 SEC14L1Q92503 715 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 ADAM22Q9P0K1 906 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 KIAA0391O15091 583 aaKnown RBP17.22■□□□□ 0.35
IFT140-201ENST00000361339 JAK3P52333 1124 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 LACTBP83111 547 aaPredicted RBP17.22■□□□□ 0.35
IFT140-201ENST00000361339 CNTN2Q02246 1040 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 RBBP5Q15291 538 aaKnown RBP17.22■□□□□ 0.35
IFT140-201ENST00000361339 C1orf54Q8WWF1 131 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 POLR3FQ9H1D9 316 aaPredicted RBP17.22■□□□□ 0.35
IFT140-201ENST00000361339 FAM114A2Q9NRY5 505 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 TBK1Q9UHD2 729 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 TTC7AQ9ULT0 858 aaPredicted RBP17.22■□□□□ 0.35
IFT140-201ENST00000361339 KIAA1217Q5T5P2 1943 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 CFAP73A6NFT4 308 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 TTLL13PA6NNM8 815 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 CLDN3O15551 220 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 ASAP2O43150 1006 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 SNX3O60493 162 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 GNAT1P11488 350 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 HARSP12081 509 aaKnown RBP17.22■□□□□ 0.35
IFT140-201ENST00000361339 PTPRAP18433 802 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 ATP4AP20648 1035 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 NLRP11P59045 1033 aaKnown RBP17.22■□□□□ 0.35
IFT140-201ENST00000361339 MXRA7P84157 204 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 ADCY2Q08462 1091 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 LONP2Q86WA8 852 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 FBXL13Q8NEE6 735 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 ST6GALNAC4Q9H4F1 302 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 ETNK1Q9HBU6 452 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 GRHL1Q9NZI5 618 aa17.22■□□□□ 0.35
IFT140-201ENST00000361339 ATP8B3O60423 1300 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 CLSTN1O94985 981 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 ACSL3O95573 720 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 CCND1P24385 295 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 ACTR2P61160 394 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 COPS2P61201 443 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 ANGEL2Q5VTE6 544 aaKnown RBP17.21■□□□□ 0.35
IFT140-201ENST00000361339 TMEM130Q8N3G9 435 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 FITM2Q8N6M3 262 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 CD101Q93033 1021 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 TMEM237Q96Q45 408 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 NSRP1Q9H0G5 558 aaKnown RBP17.21■□□□□ 0.35
IFT140-201ENST00000361339 TMEM8AQ9HCN3 771 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 ETAA1Q9NY74 926 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 COL11A1P12107 1806 aaPredicted RBP17.21■□□□□ 0.35
IFT140-201ENST00000361339 UMODL1Q5DID0 1318 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 SNUPNO95149 360 aaKnown RBP17.21■□□□□ 0.35
IFT140-201ENST00000361339 GH1P01241 217 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 CCND2P30279 289 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 MMP13P45452 471 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 MFAP3P55082 362 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 ALCAMQ13740 583 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 ITIH4Q14624 930 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 TRIP13Q15645 432 aaPredicted RBP17.21■□□□□ 0.35
IFT140-201ENST00000361339 CNKSR2Q8WXI2 1034 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 NAF1Q96HR8 494 aaKnown RBP17.21■□□□□ 0.35
IFT140-201ENST00000361339 NT5C1BQ96P26 610 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 ANKEF1Q9NU02 776 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 CTNNAL1Q9UBT7 734 aa17.21■□□□□ 0.35
IFT140-201ENST00000361339 USP15Q9Y4E8 981 aaPredicted RBP17.21■□□□□ 0.35
IFT140-201ENST00000361339 ZNF280AP59817 542 aaPredicted RBP17.2■□□□□ 0.34
IFT140-201ENST00000361339 CCDC137Q6PK04 289 aaKnown RBP17.2■□□□□ 0.34
IFT140-201ENST00000361339 CCHCR1Q8TD31 782 aa17.2■□□□□ 0.34
IFT140-201ENST00000361339 ZNF668Q96K58 619 aaPredicted RBP17.2■□□□□ 0.34
IFT140-201ENST00000361339 RMDN2Q96LZ7 410 aa17.2■□□□□ 0.34
IFT140-201ENST00000361339 PWWP2AQ96N64 755 aa17.2■□□□□ 0.34
IFT140-201ENST00000361339 TSC22D3Q99576 134 aa17.2■□□□□ 0.34
IFT140-201ENST00000361339 DDX23Q9BUQ8 820 aaKnown RBP17.2■□□□□ 0.34
IFT140-201ENST00000361339 ZFATQ9P243 1243 aa17.2■□□□□ 0.34
IFT140-201ENST00000361339 P4HA2O15460 535 aa17.2■□□□□ 0.34
IFT140-201ENST00000361339 GSTA1P08263 222 aa17.2■□□□□ 0.34
IFT140-201ENST00000361339 PDE6CP51160 858 aa17.2■□□□□ 0.34
IFT140-201ENST00000361339 CDR2Q01850 454 aa17.2■□□□□ 0.34
IFT140-201ENST00000361339 SIX1Q15475 284 aaPredicted RBP17.2■□□□□ 0.34
IFT140-201ENST00000361339 DALRD3Q5D0E6 543 aaKnown RBP17.2■□□□□ 0.34
IFT140-201ENST00000361339 C11orf63Q6NUN7 778 aa17.2■□□□□ 0.34
IFT140-201ENST00000361339 PRUNE1Q86TP1 453 aa17.2■□□□□ 0.34
IFT140-201ENST00000361339 ZNF280CQ8ND82 737 aa17.2■□□□□ 0.34
IFT140-201ENST00000361339 TRPM4Q8TD43 1214 aa17.2■□□□□ 0.34
IFT140-201ENST00000361339 PABPC3Q9H361 631 aaKnown RBP17.2■□□□□ 0.34
IFT140-201ENST00000361339 JPH1Q9HDC5 661 aaPredicted RBP17.2■□□□□ 0.34
IFT140-201ENST00000361339 ZNF541Q9H0D2 1346 aa17.2■□□□□ 0.34
IFT140-201ENST00000361339 RASGRF2O14827 1237 aa17.19■□□□□ 0.34
IFT140-201ENST00000361339 RFX1P22670 979 aa17.19■□□□□ 0.34
IFT140-201ENST00000361339 RRM1P23921 792 aa17.19■□□□□ 0.34
IFT140-201ENST00000361339 SFNP31947 248 aa17.19■□□□□ 0.34
IFT140-201ENST00000361339 GPC3P51654 580 aa17.19■□□□□ 0.34
IFT140-201ENST00000361339 RAD23BP54727 409 aa17.19■□□□□ 0.34
IFT140-201ENST00000361339 CEP120Q8N960 986 aa17.19■□□□□ 0.34
IFT140-201ENST00000361339 ASAP3Q8TDY4 903 aa17.19■□□□□ 0.34
IFT140-201ENST00000361339 MFSD14AQ96MC6 490 aa17.19■□□□□ 0.34
IFT140-201ENST00000361339 TXLNGYQ9BZA5 131 aa17.19■□□□□ 0.34
IFT140-201ENST00000361339 CYP26B1Q9NR63 512 aa17.19■□□□□ 0.34
IFT140-201ENST00000361339 CYP39A1Q9NYL5 469 aa17.19■□□□□ 0.34
IFT140-201ENST00000361339 PHF2O75151 1096 aa17.19■□□□□ 0.34
IFT140-201ENST00000361339 PPFIA2O75334 1257 aa17.19■□□□□ 0.34
IFT140-201ENST00000361339 EIF3BP55884 814 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms