RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 RBM15Q96T37 977 aaKnown RBP eCLIP9.13□□□□□ -0.952e-10■■■■□ 23.5
CD46-206ENST00000360212 GRIP2Q9C0E4 1043 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 PACSIN3Q9UKS6 424 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 PCDHGB4Q9UN71 923 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 PCDHA12Q9UN75 941 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 PCDHGB5Q9Y5G0 923 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 COMMD3-BMI1R4GMX3 469 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 MROH5Q6ZUA9 1318 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 ECE2O60344 883 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 LMNB1P20700 586 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 CTNNA2P26232 953 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 EPHB1P54762 984 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 R3HDM1Q15032 1099 aaKnown RBP9.13□□□□□ -0.95
CD46-206ENST00000360212 EPC2Q52LR7 807 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 SH3D19Q5HYK7 790 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 SYCP2LQ5T4T6 812 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 C14orf80Q86SX3 495 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 SESTD1Q86VW0 696 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 GSTCDQ8NEC7 633 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 KAT5Q92993 513 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 MTMR9Q96QG7 549 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 CCDC77Q9BR77 488 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 RAB34Q9BZG1 259 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 TUT1Q9H6E5 874 aaKnown RBP9.13□□□□□ -0.95
CD46-206ENST00000360212 GPCPD1Q9NPB8 672 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 SLC17A7Q9P2U7 560 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.13□□□□□ -0.95
CD46-206ENST00000360212 LMTK3Q96Q04 1460 aa9.13□□□□□ -0.95
CD46-206ENST00000360212 FAM237BA0A1B0GVD1 139 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 TROVE2P10155 538 aaKnown RBP eCLIP9.12□□□□□ -0.95
CD46-206ENST00000360212 GNA11P29992 359 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 HOXD13P35453 343 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 PRKCIP41743 596 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 ARFIP2P53365 341 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 AQP4P55087 323 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 PPP2R5EQ16537 467 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 SFT2D3Q587I9 215 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 LRRC8BQ6P9F7 803 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 ZBTB46Q86UZ6 589 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 ZNF444Q8N0Y2 327 aaPredicted RBP9.12□□□□□ -0.95
CD46-206ENST00000360212 SLC26A7Q8TE54 656 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 TTC17Q96AE7 1141 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 RUSC1Q9BVN2 902 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 TMEM120AQ9BXJ8 343 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 MAK16Q9BXY0 300 aaKnown RBP9.12□□□□□ -0.95
CD46-206ENST00000360212 NMUR2Q9GZQ4 415 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 ZNF395Q9H8N7 513 aaPredicted RBP9.12□□□□□ -0.95
CD46-206ENST00000360212 LARSQ9P2J5 1176 aaKnown RBP9.12□□□□□ -0.95
CD46-206ENST00000360212 TRAF3IP3Q9Y228 551 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 AK5Q9Y6K8 562 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 A0A0A6YYK5 440 aaPredicted RBP9.12□□□□□ -0.95
CD46-206ENST00000360212 TMEM247A6NEH6 219 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 UBAP1LF5GYI3 381 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 TRPA1O75762 1119 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 TFPTP0C1Z6 253 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 ETS1P14921 441 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 SSTR3P32745 418 aaPredicted RBP9.12□□□□□ -0.95
CD46-206ENST00000360212 PSMD7P51665 324 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 JAM2P57087 298 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 HPCAP84074 193 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 GRAMD1BQ3KR37 738 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 ARSHQ5FYA8 562 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 IZUMO3Q5VZ72 239 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 KAZNQ674X7 775 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 CCDC24Q8N4L8 307 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 LZICQ8WZA0 190 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 CLIP3Q96DZ5 547 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 SNF8Q96H20 258 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 ABHD8Q96I13 439 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 KLHL4Q9C0H6 718 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 METTL14Q9HCE5 456 aaKnown RBP9.12□□□□□ -0.95
CD46-206ENST00000360212 PFDN4Q9NQP4 134 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 SH3GLB2Q9NR46 395 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 DDX25Q9UHL0 483 aaKnown RBP9.12□□□□□ -0.95
CD46-206ENST00000360212 APPL1Q9UKG1 709 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 UMODL1Q5DID0 1318 aa9.12□□□□□ -0.95
CD46-206ENST00000360212 CCDC195A0A1B0GUA6 201 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 P4HA2O15460 535 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 FOXD2O60548 495 aaPredicted RBP9.11□□□□□ -0.95
CD46-206ENST00000360212 PDE5AO76074 875 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 LDHAP00338 332 aaKnown RBP9.11□□□□□ -0.95
CD46-206ENST00000360212 PCSK6P29122 969 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 HOXD11P31277 338 aaPredicted RBP9.11□□□□□ -0.95
CD46-206ENST00000360212 MED21Q13503 144 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 GRM4Q14833 912 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 PDK4Q16654 411 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 MMEL1Q495T6 779 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 COBLL1Q53SF7 1204 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 PCNX4Q63HM2 1172 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 IYDQ6PHW0 289 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 C3orf67Q6ZVT6 689 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 ZNF554Q86TJ5 538 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 TRABD2AQ86V40 505 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 DZIP1Q86YF9 867 aaKnown RBP9.11□□□□□ -0.95
CD46-206ENST00000360212 IQCF2Q8IXL9 164 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 THEMISQ8N1K5 641 aaPredicted RBP9.11□□□□□ -0.95
CD46-206ENST00000360212 OGFOD1Q8N543 542 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 GLIS1Q8NBF1 620 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 GCNAQ96QF7 691 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 PANX3Q96QZ0 392 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms