RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 ACP6Q9NPH0 428 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 KCNH4Q9UQ05 1017 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 R3HDM2Q9Y2K5 976 aaKnown RBP8.66□□□□□ -1.02
CFAP54-201ENST00000342887 ZBTB12Q9Y330 459 aaPredicted RBP8.66□□□□□ -1.02
CFAP54-201ENST00000342887 PCDHB2Q9Y5E7 798 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 SCN1AP35498 2009 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 TTLL13PA6NNM8 815 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 ERCC3P19447 782 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 ITIH2P19823 946 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 MAP2K2P36507 400 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 CAV1Q03135 178 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 ARCQ7LC44 396 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 CCDC91Q7Z6B0 441 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 BRSK2Q8IWQ3 736 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 AGGF1Q8N302 714 aaeCLIP8.66□□□□□ -1.02
CFAP54-201ENST00000342887 ZCCHC9Q8N567 271 aaKnown RBP8.66□□□□□ -1.02
CFAP54-201ENST00000342887 MCPH1Q8NEM0 835 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 CCDC102AQ96A19 550 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 SEMA4AQ9H3S1 761 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 PNPLA8Q9NP80 782 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 TOPORSQ9NS56 1045 aaPredicted RBP8.66□□□□□ -1.02
CFAP54-201ENST00000342887 CNTN3Q9P232 1028 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 CYTH4Q9UIA0 394 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 GRID1Q9ULK0 1009 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 MTMR7Q9Y216 660 aa8.66□□□□□ -1.02
CFAP54-201ENST00000342887 A0A0G2JLL6 359 aaPredicted RBP8.65□□□□□ -1.02
CFAP54-201ENST00000342887 ARHGEF35A5YM69 484 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 KIF1CO43896 1103 aaKnown RBP8.65□□□□□ -1.02
CFAP54-201ENST00000342887 B4GALT4O60513 344 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 CLTAP09496 248 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 CCND2P30279 289 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 CHKAP35790 457 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 TAS2R40P59535 323 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 CTC1Q2NKJ3 1217 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 CCDC174Q6PII3 467 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 RUFY4Q6ZNE9 571 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 HS2ST1Q7LGA3 356 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 PRRT2Q7Z6L0 340 aaPredicted RBP8.65□□□□□ -1.02
CFAP54-201ENST00000342887 SPAG5Q96R06 1193 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 NUP85Q9BW27 656 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 TRIM7Q9C029 511 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 CASP8AP2Q9UKL3 1982 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 SOWAHBA6NEL2 793 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 CYP26A1O43174 497 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 CEP104O60308 925 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 ITGAVP06756 1048 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 NR3C2P08235 984 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 HOXC8P31273 242 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 RFC5P40937 340 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 SKIV2L2P42285 1042 aaKnown RBP8.65□□□□□ -1.02
CFAP54-201ENST00000342887 GCLMP48507 274 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 HIRAP54198 1017 aaPredicted RBP8.65□□□□□ -1.02
CFAP54-201ENST00000342887 INCA1Q0VD86 236 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 RNASEH2BQ5TBB1 312 aaKnown RBP8.65□□□□□ -1.02
CFAP54-201ENST00000342887 PLA2G4FQ68DD2 849 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 CROCCP2Q86T23 111 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 VPS36Q86VN1 386 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 ALLCQ8N6M5 410 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 TAF4BQ92750 862 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 SLITRK1Q96PX8 696 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 ZNF518BQ9C0D4 1074 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 RPAP3Q9H6T3 665 aaPredicted RBP8.65□□□□□ -1.02
CFAP54-201ENST00000342887 MKS1Q9NXB0 559 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 PARP2Q9UGN5 583 aa8.65□□□□□ -1.02
CFAP54-201ENST00000342887 LIASO43766 372 aa8.65□□□□□ -1.03
CFAP54-201ENST00000342887 NLRP11P59045 1033 aaKnown RBP8.65□□□□□ -1.03
CFAP54-201ENST00000342887 ACTR2P61160 394 aa8.65□□□□□ -1.03
CFAP54-201ENST00000342887 CCDC137Q6PK04 289 aaKnown RBP8.65□□□□□ -1.03
CFAP54-201ENST00000342887 POTEAQ6S8J7 498 aa8.65□□□□□ -1.03
CFAP54-201ENST00000342887 B4GALNT4Q76KP1 1039 aa8.65□□□□□ -1.03
CFAP54-201ENST00000342887 KIAA0319LQ8IZA0 1049 aa8.65□□□□□ -1.03
CFAP54-201ENST00000342887 CAGE1Q8TC20 777 aa8.65□□□□□ -1.03
CFAP54-201ENST00000342887 CTNNBL1Q8WYA6 563 aaPredicted RBP8.65□□□□□ -1.03
CFAP54-201ENST00000342887 TRIM11Q96F44 468 aa8.65□□□□□ -1.03
CFAP54-201ENST00000342887 FRMD8P1Q9BZ68 369 aaPredicted RBP8.65□□□□□ -1.03
CFAP54-201ENST00000342887 POLD4Q9HCU8 107 aa8.65□□□□□ -1.03
CFAP54-201ENST00000342887 ZNF277Q9NRM2 450 aaPredicted RBP8.65□□□□□ -1.03
CFAP54-201ENST00000342887 H0YCG3 227 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 SLC16A4O15374 487 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 ASMTLO95671 621 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 TTC4O95801 387 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 CDKN2BP42772 138 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 AP3M2P53677 418 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 CAPSQ13938 189 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 ZNF268Q14587 947 aaPredicted RBP8.64□□□□□ -1.03
CFAP54-201ENST00000342887 SLMAPQ14BN4 828 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 HSP90B2PQ58FF3 399 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 CCDC70Q6NSX1 233 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 LEKR1Q6ZMV7 388 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 PLPPR4Q7Z2D5 763 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 WDR49Q8IV35 697 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 RIBC1Q8N443 379 aaPredicted RBP8.64□□□□□ -1.03
CFAP54-201ENST00000342887 CHST13Q8NET6 341 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 BCAS4Q8TDM0 211 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 CKAP2Q8WWK9 683 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 KHSRPQ92945 711 aaKnown RBP eCLIP8.64□□□□□ -1.03
CFAP54-201ENST00000342887 SEC16BQ96JE7 1060 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 TANGO6Q9C0B7 1094 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 CHST7Q9NS84 486 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 NUB1Q9Y5A7 615 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms