RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 STK24Q9Y6E0 443 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 KIAA0391O15091 583 aaKnown RBP13.95□□□□□ -0.18
COL2A1-201ENST00000337299 KRT38O76015 456 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 GYS1P13807 737 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 PEX3P56589 373 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 BPIFB4P59827 614 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 BNIP1Q12981 228 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 ATP1A4Q13733 1029 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 GALNT15Q8N3T1 639 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 SCFD2Q8WU76 684 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 GCNAQ96QF7 691 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 ACCSQ96QU6 501 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 PCMTD2Q9NV79 361 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 HEY1Q9Y5J3 304 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 SPATA31D1Q6ZQQ2 1576 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 CCDC189A1A4V9 331 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 FCHO1O14526 889 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 AKR1B1P15121 316 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 BGNP21810 368 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 ADRA1DP25100 572 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 CASP2P42575 452 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 ECE1P42892 770 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 DLGAP5Q15398 846 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 SEC23AQ15436 765 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 OASLQ15646 514 aaKnown RBP13.95□□□□□ -0.18
COL2A1-201ENST00000337299 ECHDC2Q86YB7 292 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 PPP2R3CQ969Q6 453 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 IWS1Q96ST2 819 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 AMNQ9BXJ7 453 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 S100BP04271 92 aaPredicted RBP13.95□□□□□ -0.18
COL2A1-201ENST00000337299 SOX11P35716 441 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 MARCKSL1P49006 195 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 GALK1P51570 392 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 USP46P62068 366 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 RPS6P62753 249 aaKnown RBP13.95□□□□□ -0.18
COL2A1-201ENST00000337299 PTK7Q13308 1070 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 MTMR2Q13614 643 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 CHI3L2Q15782 390 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 CDO1Q16878 200 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 LMBRD2Q68DH5 695 aaPredicted RBP13.95□□□□□ -0.18
COL2A1-201ENST00000337299 JADE1Q6IE81 842 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 RSBN1LQ6PCB5 846 aaPredicted RBP13.95□□□□□ -0.18
COL2A1-201ENST00000337299 C6orf89Q6UWU4 347 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 ZNF662Q6ZS27 426 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 NUDT12Q9BQG2 462 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 DRC3Q9H069 523 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 EBF2Q9HAK2 575 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 E7ENQ6 273 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 AKAP3O75969 853 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 BMP3P12645 472 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 CCNFP41002 786 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 AP1B1Q10567 949 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 STX3Q13277 289 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 RRP1BQ14684 758 aaKnown RBP13.94□□□□□ -0.18
COL2A1-201ENST00000337299 TRAPPC9Q96Q05 1148 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 PAGR1Q9BTK6 254 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 FAM192AQ9GZU8 254 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 DENND2DQ9H6A0 471 aaPredicted RBP13.94□□□□□ -0.18
COL2A1-201ENST00000337299 KLHL33A6NCF5 533 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 SLC12A2P55011 1212 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 ZNF200P98182 395 aaPredicted RBP13.94□□□□□ -0.18
COL2A1-201ENST00000337299 GRM1Q13255 1194 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL2A1-201ENST00000337299 RNF169Q8NCN4 708 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 ZNF577Q9BSK1 485 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 NR2E1Q9Y466 385 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 KNDC1Q76NI1 1749 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 SYNJ2BP-COX16A0A087WUM0 186 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 PNMA6FA0A0J9YX94 578 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 RAD17O75943 681 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 USP1O94782 785 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 NFIXQ14938 502 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 ANO4Q32M45 955 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 EDRF1Q3B7T1 1238 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 SPOPLQ6IQ16 392 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 TMEM270Q6UE05 265 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 XXYLT1Q8NBI6 393 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 TMA16Q96EY4 203 aaKnown RBP13.94□□□□□ -0.18
COL2A1-201ENST00000337299 GJD4Q96KN9 370 aaPredicted RBP13.94□□□□□ -0.18
COL2A1-201ENST00000337299 NACC1Q96RE7 527 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 PRPF18Q99633 342 aaKnown RBP13.94□□□□□ -0.18
COL2A1-201ENST00000337299 NINJ2Q9NZG7 142 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 COX16Q9P0S2 106 aa13.94□□□□□ -0.18
COL2A1-201ENST00000337299 NKX1-2Q9UD57 310 aaPredicted RBP13.94□□□□□ -0.18
COL2A1-201ENST00000337299 TCHHL1Q5QJ38 904 aaPredicted RBP13.93□□□□□ -0.18
COL2A1-201ENST00000337299 SCARA5Q6ZMJ2 495 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 MPHOSPH6Q99547 160 aaKnown RBP13.93□□□□□ -0.18
COL2A1-201ENST00000337299 TPD52L2O43399 206 aaKnown RBP13.93□□□□□ -0.18
COL2A1-201ENST00000337299 TBC1D12O60347 775 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 BBOX1O75936 387 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 SERPINB8P50452 374 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 AQP5P55064 265 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 OCA2Q04671 838 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 GRIK3Q13003 919 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 PDIA5Q14554 519 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 VTI1AQ96AJ9 217 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 FAM84BQ96KN1 310 aaPredicted RBP13.93□□□□□ -0.18
COL2A1-201ENST00000337299 CCDC90BQ9GZT6 254 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 ATXN10Q9UBB4 475 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 ZNF229Q9UJW7 825 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms