RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 ZNF280AP59817 542 aaPredicted RBP19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 STAT4Q14765 748 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 CCDC6Q16204 474 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 GPATCH4Q5T3I0 446 aaKnown RBP19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 TTBK2Q6IQ55 1244 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 C4orf50Q6ZRC1 276 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 SYDE1Q6ZW31 735 aaPredicted RBP19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 DENND1AQ8TEH3 1009 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 MAML1Q92585 1016 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 FGD4Q96M96 766 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 MIPEPQ99797 713 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 CCDC77Q9BR77 488 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 TRAIPQ9BWF2 469 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 CHST7Q9NS84 486 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 LNPEPQ9UIQ6 1025 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 MUTP22033 750 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 NMT1P30419 496 aaKnown RBP19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 OCRLQ01968 901 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 SPARCL1Q14515 664 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 SNX30Q5VWJ9 437 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 FAM43BQ6ZT52 329 aaPredicted RBP19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 SIAH1Q8IUQ4 282 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 ZNF564Q8TBZ8 553 aaPredicted RBP19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 PSPC1Q8WXF1 523 aaKnown RBP19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 ATG4AQ8WYN0 398 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 ANO3Q9BYT9 981 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 SFI1A8K8P3 1242 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 ZBTB5O15062 677 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 ATP9AO75110 1047 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 BCRP11274 1271 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 SKIP12755 728 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 GAP43P17677 238 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 CYP2J2P51589 502 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 CUL3Q13618 768 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 PDK4Q16654 411 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 ZC2HC1CQ53FD0 456 aaPredicted RBP19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 LMO3Q8TAP4 145 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 NRG4Q8WWG1 115 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 EZH1Q92800 747 aaPredicted RBP19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 ITFG2Q969R8 447 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 BICD1Q96G01 975 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 PCDHB18PQ96TA0 734 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 NUP85Q9BW27 656 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 TMEM39BQ9GZU3 492 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 ZFP69BQ9UJL9 534 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 GRID1Q9ULK0 1009 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 USP17L10C9JJH3 530 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 GH2P01242 217 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 SLC16A2P36021 539 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 CDR2Q01850 454 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 RCN1Q15293 331 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 TRABD2AQ86V40 505 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 RIBC1Q8N443 379 aaPredicted RBP19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 EPAS1Q99814 870 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 FRMD4BQ9Y2L6 1034 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 GJA3Q9Y6H8 435 aa19.22■□□□□ 0.67
CLSTN3-202ENST00000331148 A0A1B0GVG6 124 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 SMAPO00193 183 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 PRPF4O43172 522 aaKnown RBP eCLIP19.21■□□□□ 0.672e-11■■■□□ 18.4
CLSTN3-202ENST00000331148 CYP4A11Q02928 519 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 PRR16Q569H4 304 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 SLC45A4Q5BKX6 768 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 KSR1Q8IVT5 923 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 SCG3Q8WXD2 468 aaKnown RBP19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 C9orf72Q96LT7 481 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 UBE2TQ9NPD8 197 aaPredicted RBP19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 UBN1Q9NPG3 1134 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 PCMTD2Q9NV79 361 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 RAD21O60216 631 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 TBC1D12O60347 775 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 HNRNPCL1O60812 293 aaKnown RBP19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 GAS8O95995 478 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 MAN1A1P33908 653 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 ADCY8P40145 1251 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 GMPSP49915 693 aaPredicted RBP19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 CACNA2D1P54289 1103 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 JAG1P78504 1218 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 TBC1D25Q3MII6 688 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 ARHGAP22Q7Z5H3 698 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 ZC3H18Q86VM9 953 aaKnown RBP19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 ARHGEF19Q8IW93 802 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 B4GALNT2Q8NHY0 566 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 TIPINQ9BVW5 301 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 ZCWPW1Q9H0M4 648 aa19.21■□□□□ 0.67
CLSTN3-202ENST00000331148 FAM13AO94988 1023 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 VPS41P49754 854 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 NR1H3Q13133 447 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 SLFN13Q68D06 897 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 DSTYKQ6XUX3 929 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 KCTD1Q719H9 257 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 NLRP9Q7RTR0 991 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 GRK7Q8WTQ7 553 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 DCAF4Q8WV16 495 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 CADM1Q9BY67 442 aaKnown RBP19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 CYLDQ9NQC7 956 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 SAR1AQ9NR31 198 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 DMAC2Q9NW81 257 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 RABGAP1Q9Y3P9 1069 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 KRT36O76013 467 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 CYP1A2P05177 515 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms