RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 BICD1Q96G01 975 aa19.29■□□□□ 0.68
PTPMT1-201ENST00000326656 REEP2Q9BRK0 252 aa19.29■□□□□ 0.68
PTPMT1-201ENST00000326656 RPP25Q9BUL9 199 aaKnown RBP19.29■□□□□ 0.68
PTPMT1-201ENST00000326656 PARVGQ9HBI0 331 aa19.29■□□□□ 0.68
PTPMT1-201ENST00000326656 HCFC1R1Q9NWW0 138 aa19.29■□□□□ 0.68
PTPMT1-201ENST00000326656 AFF4Q9UHB7 1163 aaKnown RBP19.29■□□□□ 0.68
PTPMT1-201ENST00000326656 UBQLN1Q9UMX0 589 aaKnown RBP19.29■□□□□ 0.68
PTPMT1-201ENST00000326656 MYH15Q9Y2K3 1946 aa19.29■□□□□ 0.68
PTPMT1-201ENST00000326656 NPHP3-ACAD11A0A0J9YXS1 232 aa19.28■□□□□ 0.68
PTPMT1-201ENST00000326656 M0QZQ0 153 aa19.28■□□□□ 0.68
PTPMT1-201ENST00000326656 ECI2O75521 394 aa19.28■□□□□ 0.68
PTPMT1-201ENST00000326656 FAM13AO94988 1023 aa19.28■□□□□ 0.68
PTPMT1-201ENST00000326656 OAZ2O95190 189 aa19.28■□□□□ 0.68
PTPMT1-201ENST00000326656 RHOP08100 348 aa19.28■□□□□ 0.68
PTPMT1-201ENST00000326656 LIG4P49917 911 aa19.28■□□□□ 0.68
PTPMT1-201ENST00000326656 MYCT1Q8N699 235 aa19.28■□□□□ 0.68
PTPMT1-201ENST00000326656 OSBPL6Q9BZF3 934 aa19.28■□□□□ 0.68
PTPMT1-201ENST00000326656 CCSER1Q9C0I3 900 aa19.28■□□□□ 0.68
PTPMT1-201ENST00000326656 CYP4F11Q9HBI6 524 aa19.28■□□□□ 0.68
PTPMT1-201ENST00000326656 A0A0B4J269 797 aa19.27■□□□□ 0.68
PTPMT1-201ENST00000326656 PRR23AA6NEV1 266 aa19.27■□□□□ 0.68
PTPMT1-201ENST00000326656 HNRNPDLO14979 420 aaKnown RBP19.27■□□□□ 0.68
PTPMT1-201ENST00000326656 OGTO15294 1046 aa19.27■□□□□ 0.68
PTPMT1-201ENST00000326656 TRAK2O60296 914 aa19.27■□□□□ 0.68
PTPMT1-201ENST00000326656 CXCL8P10145 99 aa19.27■□□□□ 0.68
PTPMT1-201ENST00000326656 DDIT3P35638 169 aa19.27■□□□□ 0.68
PTPMT1-201ENST00000326656 PPP2R3AQ06190 1150 aa19.27■□□□□ 0.68
PTPMT1-201ENST00000326656 SEZ6Q53EL9 994 aa19.27■□□□□ 0.68
PTPMT1-201ENST00000326656 LEMD2Q8NC56 503 aa19.27■□□□□ 0.68
PTPMT1-201ENST00000326656 DDX23Q9BUQ8 820 aaKnown RBP19.27■□□□□ 0.68
PTPMT1-201ENST00000326656 HAPLN2Q9GZV7 340 aa19.27■□□□□ 0.68
PTPMT1-201ENST00000326656 BLOC1S4Q9NUP1 217 aa19.27■□□□□ 0.68
PTPMT1-201ENST00000326656 DLGAP2Q9P1A6 1054 aa19.27■□□□□ 0.68
PTPMT1-201ENST00000326656 INSL5Q9Y5Q6 135 aa19.27■□□□□ 0.68
PTPMT1-201ENST00000326656 ZNF292O60281 2723 aa19.27■□□□□ 0.67
PTPMT1-201ENST00000326656 SPTBN4Q9H254 2564 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 KRT18P05783 430 aaKnown RBP19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 PLCG1P19174 1290 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 AARSP49588 968 aaKnown RBP eCLIP19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 ARPP19P56211 112 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 GTF2BQ00403 316 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 POU5F1Q01860 360 aaKnown RBP19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 CACNB1Q02641 598 aaPredicted RBP19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 CUL4AQ13619 759 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 SF3A1Q15459 793 aaKnown RBP19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 SLC44A4Q53GD3 710 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 CYP4A22Q5TCH4 519 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 IQCEQ6IPM2 695 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 ASCL5Q7RTU5 278 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 FRMD5Q7Z6J6 570 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 ELMOD1Q8N336 334 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 PJA1Q8NG27 643 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 RASSF8Q8NHQ8 419 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 RAD54LQ92698 747 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 KIF12Q96FN5 646 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 BORCS6Q96GS4 357 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 ZNF512Q96ME7 567 aaPredicted RBP19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 NELL2Q99435 816 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 ST6GALNAC4Q9H4F1 302 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 RPF1Q9H9Y2 349 aaKnown RBP19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 TUBGCP4Q9UGJ1 667 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 CFAP54Q96N23 3096 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 VPS13AQ96RL7 3174 aa19.26■□□□□ 0.67
PTPMT1-201ENST00000326656 KANSL1LA0AUZ9 987 aa19.25■□□□□ 0.67
PTPMT1-201ENST00000326656 FAM189A1O60320 539 aa19.25■□□□□ 0.67
PTPMT1-201ENST00000326656 TBCAO75347 108 aaKnown RBP19.25■□□□□ 0.67
PTPMT1-201ENST00000326656 SEC24AO95486 1093 aa19.25■□□□□ 0.67
PTPMT1-201ENST00000326656 YWHAHQ04917 246 aaPredicted RBP19.25■□□□□ 0.67
PTPMT1-201ENST00000326656 MLF2Q15773 248 aaPredicted RBP19.25■□□□□ 0.67
PTPMT1-201ENST00000326656 SLC5A9Q2M3M2 681 aa19.25■□□□□ 0.67
PTPMT1-201ENST00000326656 BEST2Q8NFU1 509 aa19.25■□□□□ 0.67
PTPMT1-201ENST00000326656 LARP4BQ92615 738 aaKnown RBP19.25■□□□□ 0.67
PTPMT1-201ENST00000326656 ELSPBP1Q96BH3 223 aa19.25■□□□□ 0.67
PTPMT1-201ENST00000326656 MCRS1Q96EZ8 462 aa19.25■□□□□ 0.67
PTPMT1-201ENST00000326656 CORO1BQ9BR76 489 aa19.25■□□□□ 0.67
PTPMT1-201ENST00000326656 DERAQ9Y315 318 aa19.25■□□□□ 0.67
PTPMT1-201ENST00000326656 OR6C75A6NL08 312 aa19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 LACTBL1A8MY62 500 aa19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 K7ENM7 598 aa19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 TYMPP19971 482 aa19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 MAGEA9P43362 315 aa19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 ADCY1Q08828 1119 aa19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 SNW1Q13573 536 aaKnown RBP19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 DHX8Q14562 1220 aaKnown RBP19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 MCM6Q14566 821 aa19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 ENOX2Q16206 610 aaKnown RBP19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 PRSS36Q5K4E3 855 aa19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 SPATA1Q5VX52 437 aa19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 SLFN12LQ6IEE8 588 aa19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 PDZD4Q76G19 769 aaPredicted RBP19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 USP37Q86T82 979 aa19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 C1orf210Q8IVY1 113 aa19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 KXD1Q9BQD3 176 aa19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 MSTO1Q9BUK6 570 aa19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 CPSF3Q9UKF6 684 aaKnown RBP19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 MYO15AQ9UKN7 3530 aa19.24■□□□□ 0.67
PTPMT1-201ENST00000326656 DCNP07585 359 aaKnown RBP19.23■□□□□ 0.67
PTPMT1-201ENST00000326656 TNFSF9P41273 254 aa19.23■□□□□ 0.67
PTPMT1-201ENST00000326656 EPHA5P54756 1037 aa19.23■□□□□ 0.67
PTPMT1-201ENST00000326656 GPR17Q13304 367 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms