RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 USP2O75604 605 aaPredicted RBP12.3□□□□□ -0.44
PTPN2-201ENST00000309660 HSDL1Q3SXM5 330 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 TUBB8Q3ZCM7 444 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 CPLX4Q7Z7G2 160 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 MGARPQ8TDB4 240 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 MORC4Q8TE76 937 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 SCLT1Q96NL6 688 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 DDX23Q9BUQ8 820 aaKnown RBP12.3□□□□□ -0.44
PTPN2-201ENST00000309660 PCYOX1Q9UHG3 505 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 LOXHD1Q8IVV2 1947 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 IRF6O14896 467 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 MTA2O94776 668 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 FARP2O94887 1054 aaPredicted RBP12.3□□□□□ -0.44
PTPN2-201ENST00000309660 CD19P15391 556 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 BRD2P25440 801 aaKnown RBP12.3□□□□□ -0.44
PTPN2-201ENST00000309660 CDR1P51861 262 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 RTP1P59025 263 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 ORC1Q13415 861 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 TRPC3Q13507 836 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 DCUN1D2Q6PH85 259 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.3□□□□□ -0.44
PTPN2-201ENST00000309660 TMEM174Q8WUU8 243 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 CLMNQ96JQ2 1002 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 SNCAIPQ9Y6H5 919 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 SOWAHBA6NEL2 793 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 STAM2O75886 525 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 CLTAP09496 248 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 KRT10P13645 584 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 TAS2R40P59535 323 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 MYL6P60660 151 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 RPL7AP62424 266 aaKnown RBP12.29□□□□□ -0.44
PTPN2-201ENST00000309660 LONRF1Q17RB8 773 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 CHADLQ6NUI6 762 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 B4GALNT4Q76KP1 1039 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 SULF1Q8IWU6 871 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 TMEM130Q8N3G9 435 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 CEP120Q8N960 986 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 CHST13Q8NET6 341 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.29□□□□□ -0.44
PTPN2-201ENST00000309660 PCYT2Q99447 389 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 SPATC1LQ9H0A9 340 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 PARP2Q9UGN5 583 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 MYH9P35579 1960 aaKnown RBP12.29□□□□□ -0.44
PTPN2-201ENST00000309660 A0A0B4J269 797 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 ZC3H11AO75152 810 aaKnown RBP eCLIP12.29□□□□□ -0.44
PTPN2-201ENST00000309660 EIF3BP55884 814 aaKnown RBP12.29□□□□□ -0.44
PTPN2-201ENST00000309660 HP1BP3Q5SSJ5 553 aaPredicted RBP12.29□□□□□ -0.44
PTPN2-201ENST00000309660 FAM160B1Q5W0V3 765 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 C15orf39Q6ZRI6 1047 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 ZNF365Q70YC5 407 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 TAB3Q8N5C8 712 aaPredicted RBP12.29□□□□□ -0.44
PTPN2-201ENST00000309660 C1orf131Q8NDD1 294 aaKnown RBP12.29□□□□□ -0.44
PTPN2-201ENST00000309660 COPS5Q92905 334 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 MLXIPLQ9NP71 852 aa12.29□□□□□ -0.44
PTPN2-201ENST00000309660 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.29□□□□□ -0.44
PTPN2-201ENST00000309660 COL11A1P12107 1806 aaPredicted RBP12.29□□□□□ -0.44
PTPN2-201ENST00000309660 GMNCA6NCL1 334 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 FOXO6A8MYZ6 492 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 GOLGA8SH3BPF8 625 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 GAS8O95995 478 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 LDHAP00338 332 aaKnown RBP12.28□□□□□ -0.44
PTPN2-201ENST00000309660 SIX1Q15475 284 aaPredicted RBP12.28□□□□□ -0.44
PTPN2-201ENST00000309660 LBX2Q6XYB7 198 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 CAPN12Q6ZSI9 719 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 FBXO16Q8IX29 292 aaPredicted RBP12.28□□□□□ -0.44
PTPN2-201ENST00000309660 DNERQ8NFT8 737 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 SEPT1Q8WYJ6 367 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 RAPGEF5Q92565 580 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 TBK1Q9UHD2 729 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 BHMG1C9JSJ3 638 aaPredicted RBP12.28□□□□□ -0.44
PTPN2-201ENST00000309660 ADCY3O60266 1144 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 TMEM191BP0C7N4 346 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 ARL2P36404 184 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 MAGEA9P43362 315 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 NOMO3P69849 1222 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 PLCB3Q01970 1234 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 TMEM63BQ5T3F8 832 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 CYP4A22Q5TCH4 519 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 AGBL2Q5U5Z8 902 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 ABRAQ8N0Z2 381 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 ZNF606Q8WXB4 792 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 CGRRF1Q99675 332 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 EPB41L4BQ9H329 900 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 SLC12A6Q9UHW9 1150 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 RASGRF2O14827 1237 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 ATP2A1O14983 1001 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 ARIH2O95376 493 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 ATF2P15336 505 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 TCF4P15884 667 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 ACO1P21399 889 aaKnown RBP12.28□□□□□ -0.44
PTPN2-201ENST00000309660 CHKAP35790 457 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 NEDD9Q14511 834 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 TRIM11Q96F44 468 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 MCEEQ96PE7 176 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 KCNG1Q9UIX4 513 aa12.28□□□□□ -0.44
PTPN2-201ENST00000309660 FAM107AO95990 144 aa12.27□□□□□ -0.44
PTPN2-201ENST00000309660 PRKCBP05771 671 aa12.27□□□□□ -0.44
PTPN2-201ENST00000309660 CHN1P15882 459 aa12.27□□□□□ -0.44
PTPN2-201ENST00000309660 CLCN3P51790 818 aa12.27□□□□□ -0.44
PTPN2-201ENST00000309660 ITGA8P53708 1063 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms