RNA–Protein interactions for RNA: ENST00000285670.6

SAMSN1-201, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 2,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-201ENST00000285670 VCX3BQ9H321 246 aa4.85□□□□□ -1.63
SAMSN1-201ENST00000285670 RIOX1Q9H6W3 641 aa4.85□□□□□ -1.63
SAMSN1-201ENST00000285670 LRRC19Q9H756 370 aa4.85□□□□□ -1.63
SAMSN1-201ENST00000285670 VCX3AQ9NNX9 186 aa4.85□□□□□ -1.63
SAMSN1-201ENST00000285670 UBN1Q9NPG3 1134 aa4.85□□□□□ -1.63
SAMSN1-201ENST00000285670 SAR1AQ9NR31 198 aa4.85□□□□□ -1.63
SAMSN1-201ENST00000285670 TYW1Q9NV66 732 aaKnown RBP4.85□□□□□ -1.63
SAMSN1-201ENST00000285670 PCMTD2Q9NV79 361 aa4.85□□□□□ -1.63
SAMSN1-201ENST00000285670 CHCHD3Q9NX63 227 aaKnown RBP4.85□□□□□ -1.63
SAMSN1-201ENST00000285670 LARSQ9P2J5 1176 aaKnown RBP4.85□□□□□ -1.63
SAMSN1-201ENST00000285670 LNPEPQ9UIQ6 1025 aa4.85□□□□□ -1.63
SAMSN1-201ENST00000285670 DNAJC12Q9UKB3 198 aa4.85□□□□□ -1.63
SAMSN1-201ENST00000285670 PHTF1Q9UMS5 762 aa4.85□□□□□ -1.63
SAMSN1-201ENST00000285670 NAALADL1Q9UQQ1 740 aa4.85□□□□□ -1.63
SAMSN1-201ENST00000285670 SH3BP1Q9Y3L3 701 aa4.85□□□□□ -1.63
SAMSN1-201ENST00000285670 MYH4Q9Y623 1939 aa4.85□□□□□ -1.63
SAMSN1-201ENST00000285670 SPATA31A5Q5VU36 1347 aa4.85□□□□□ -1.63
SAMSN1-201ENST00000285670 SPATA31A7Q8IWB4 1347 aa4.85□□□□□ -1.63
SAMSN1-201ENST00000285670 ATAD5Q96QE3 1844 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 A0A1W2PRG0 241 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 RASA4BC9J798 803 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 TP73O15350 636 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 RASA4O43374 803 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 CREB3O43889 395 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 ATP9AO75110 1047 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 TJP3O95049 919 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 ZWINTO95229 277 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 ASMTLO95671 621 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 PYGLP06737 847 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 ADH1AP07327 375 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 PYGMP11217 842 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 COMTP21964 271 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 MUTP22033 750 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 RFX1P22670 979 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 PRDX5P30044 214 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 MAN1A1P33908 653 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 HOXD13P35453 343 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 RANBP1P43487 201 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 KCNJ1P48048 391 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 MARCKSL1P49006 195 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 CASP5P51878 434 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 SLC12A3P55017 1021 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 SH3BGRP55822 239 aaPredicted RBP4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 GPC5P78333 572 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 CDR2Q01850 454 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 SLC34A1Q06495 639 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 DNAJC3Q13217 504 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 GIT2Q14161 759 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 SPARCL1Q14515 664 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 KIF22Q14807 665 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 KYNUQ16719 465 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 KHDC1Q4VXA5 237 aaKnown RBP4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 SLC45A4Q5BKX6 768 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 ARSHQ5FYA8 562 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 SPTY2D1Q68D10 685 aaPredicted RBP4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 ZNF449Q6P9G9 518 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 LYSMD3Q7Z3D4 306 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 ZC3H18Q86VM9 953 aaKnown RBP4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 KLHL23Q8NBE8 558 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 ATL2Q8NHH9 583 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 ZNF398Q8TD17 642 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 SCG3Q8WXD2 468 aaKnown RBP4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 GATA6Q92908 595 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 PTPRN2Q92932 1015 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 ACDQ96AP0 544 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 SNF8Q96H20 258 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 SLC4A9Q96Q91 983 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 NR1H4Q96RI1 486 aaPredicted RBP4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 TUBB6Q9BUF5 446 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 PLVAPQ9BX97 442 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 SEPT11Q9NVA2 429 aaKnown RBP4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 TAS2R14Q9NYV8 317 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 ASIC3Q9UHC3 531 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 SLC4A7Q9Y6M7 1214 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 FRMPD4Q14CM0 1322 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 CCDC88AQ3V6T2 1871 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 A0A1B0GUL6 1792 aa4.84□□□□□ -1.63
SAMSN1-201ENST00000285670 NUP98P52948 1817 aa4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 TCRBV7S2A1N4TA0A589 114 aa4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 WTIPA6NIX2 430 aaPredicted RBP4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 FOXO6A8MYZ6 492 aa4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 C2CD2LO14523 706 aa4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 PRPF4O43172 522 aaKnown RBP eCLIP4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 CCDC22O60826 627 aa4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 EDF1O60869 148 aaKnown RBP4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 MTA2O94776 668 aa4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 CBX6O95503 412 aa4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 NTSR2O95665 410 aa4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 GAS8O95995 478 aa4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 FTLP02792 175 aaPredicted RBP4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 GSTT1P30711 240 aa4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 HIBADHP31937 336 aaKnown RBP4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 CHKAP35790 457 aa4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 PSMC2P35998 433 aaKnown RBP4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 CASP4P49662 377 aa4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 SESN3P58005 492 aa4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 KRT17Q04695 432 aa4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 AP1B1Q10567 949 aa4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 RCN1Q15293 331 aa4.84□□□□□ -1.64
SAMSN1-201ENST00000285670 SIX1Q15475 284 aaPredicted RBP4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms