RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 CAPN9O14815 690 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 MCF2LO15068 1137 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 SAT1P21673 171 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 ANXA13P27216 316 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 GBP1P32455 592 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 FKBP1AP62942 108 aaKnown RBP13.31□□□□□ -0.28
HERC6-201ENST00000264346 GJC2Q5T442 439 aaPredicted RBP13.31□□□□□ -0.28
HERC6-201ENST00000264346 EFCAB12Q6NXP0 572 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 C1orf228Q6PIY5 440 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 DAW1Q8N136 415 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 CCNYQ8ND76 341 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 TMEM161BQ8NDZ6 487 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 AGAP1Q9UPQ3 857 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 C4AP0C0L4 1744 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 C4BP0C0L5 1744 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 CCDC88AQ3V6T2 1871 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 KLRG2A4D1S0 409 aaPredicted RBP13.31□□□□□ -0.28
HERC6-201ENST00000264346 PDIA2Q13087 525 aaKnown RBP13.31□□□□□ -0.28
HERC6-201ENST00000264346 CUL2Q13617 745 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 TMEM132BQ14DG7 1078 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 CFAP36Q96G28 342 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 FAM81BQ96LP2 452 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 LBHD1Q9BQE6 289 aaPredicted RBP13.31□□□□□ -0.28
HERC6-201ENST00000264346 EPN3Q9H201 632 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 FAM49BQ9NUQ9 324 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 PRPSAP2O60256 369 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 RARAP10276 462 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 KRT3P12035 628 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 TBXAS1P24557 533 aaPredicted RBP13.31□□□□□ -0.28
HERC6-201ENST00000264346 AMHR2Q16671 573 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 ENOSF1Q7L5Y1 443 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 C4orf33Q8N1A6 199 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 TRPM4Q8TD43 1214 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 LRRC8CQ8TDW0 803 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 BSNDQ8WZ55 320 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 PWWP2AQ96N64 755 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 C10orf88Q9H8K7 445 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 ERVK-5Q9HDB9 667 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 PARVAQ9NVD7 372 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 NOD1Q9Y239 953 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 UBIAD1Q9Y5Z9 338 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 COL4A1P02462 1669 aa13.31□□□□□ -0.28
HERC6-201ENST00000264346 DSG3P32926 999 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 MAN1A1P33908 653 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 CDH8P55286 799 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 ATP13A4Q4VNC1 1196 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 GLRA4Q5JXX5 417 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 NAIF1Q69YI7 327 aaPredicted RBP13.3□□□□□ -0.28
HERC6-201ENST00000264346 ZNF449Q6P9G9 518 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 SNF8Q96H20 258 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 RBM15Q96T37 977 aaKnown RBP eCLIP13.3□□□□□ -0.28
HERC6-201ENST00000264346 PIAS1O75925 651 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 RPL21P46778 160 aaKnown RBP13.3□□□□□ -0.28
HERC6-201ENST00000264346 FAM182AQ5T1J6 154 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 ATL2Q8NHH9 583 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 COPS5Q92905 334 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 PCDHB18PQ96TA0 734 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 P4HA2O15460 535 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 SUN1O94901 812 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 GCKP35557 465 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 LMNB2Q03252 620 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 TTLL4Q14679 1199 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 KIF12Q96FN5 646 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 KREMEN1Q96MU8 473 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 TIPINQ9BVW5 301 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 CNOT10Q9H9A5 744 aaKnown RBP13.3□□□□□ -0.28
HERC6-201ENST00000264346 CHST7Q9NS84 486 aa13.3□□□□□ -0.28
HERC6-201ENST00000264346 TCRBV7S2A1N4TA0A589 114 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 TCP11X1B4DZS4 312 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 MAFGO15525 162 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 INHBAP08476 426 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 PDGFRBP09619 1106 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 MARSP56192 900 aaKnown RBP13.29□□□□□ -0.28
HERC6-201ENST00000264346 ITIH3Q06033 890 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 PTGISQ16647 500 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 ASTE1Q2TB18 679 aaPredicted RBP13.29□□□□□ -0.28
HERC6-201ENST00000264346 EPM2AIP1Q7L775 607 aaPredicted RBP13.29□□□□□ -0.28
HERC6-201ENST00000264346 BBOF1Q8ND07 529 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 DDX23Q9BUQ8 820 aaKnown RBP13.29□□□□□ -0.28
HERC6-201ENST00000264346 GDF3Q9NR23 364 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 SNX9Q9Y5X1 595 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 ZNF862O60290 1169 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 CALB1P05937 261 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 CDH6P55285 790 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 IFI35P80217 286 aaPredicted RBP13.29□□□□□ -0.28
HERC6-201ENST00000264346 ZNF844Q08AG5 666 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 FYB2Q5VWT5 728 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 ARMC9Q7Z3E5 817 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 CAVIN3Q969G5 261 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 CHMP6Q96FZ7 201 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 RBM41Q96IZ5 413 aaKnown RBP13.29□□□□□ -0.28
HERC6-201ENST00000264346 FAM167AQ96KS9 214 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 IP6K2Q9UHH9 426 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 COG5Q9UP83 839 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 A6NJR5 290 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 MED7O43513 233 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 VTNP04004 478 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 SHBGP04278 402 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 ADORA2BP29275 332 aa13.29□□□□□ -0.28
HERC6-201ENST00000264346 PTGER2P43116 358 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms