RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 SUPT20HL2P0C7V6 817 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 IL1R1P14778 569 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 LY6KQ17RY6 165 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 SMTNL2Q2TAL5 461 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 POLR3CQ9BUI4 534 aaPredicted RBP19.44■□□□□ 0.7
CLIP2-201ENST00000223398 COLEC11Q9BWP8 271 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 PQBP1O60828 265 aaKnown RBP19.43■□□□□ 0.7
CLIP2-201ENST00000223398 MED24O75448 989 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 GLE1Q53GS7 698 aaKnown RBP19.43■□□□□ 0.7
CLIP2-201ENST00000223398 TRIM54Q9BYV2 358 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 PITPNM3Q9BZ71 974 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.43■□□□□ 0.7
CLIP2-201ENST00000223398 KIDINS220Q9ULH0 1771 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 PRPF4O43172 522 aaKnown RBP eCLIP19.43■□□□□ 0.75e-7■■□□□ 13.3
CLIP2-201ENST00000223398 FGFR2P21802 821 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 CAV1Q03135 178 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 WDR75Q8IWA0 830 aaKnown RBP19.43■□□□□ 0.7
CLIP2-201ENST00000223398 CLMNQ96JQ2 1002 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 PXMP2Q9NR77 195 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 DOLKQ9UPQ8 538 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 SMIM24O75264 130 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 PPFIA2O75334 1257 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 TRPA1O75762 1119 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 SERPIND1P05546 499 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 TYK2P29597 1187 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 DDR1Q08345 913 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 NCAPHQ15003 741 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 MORC4Q8TE76 937 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 AIPL1Q9NZN9 384 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 WDR35Q9P2L0 1181 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 AMACRQ9UHK6 382 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 C3orf70A6NLC5 250 aaPredicted RBP19.43■□□□□ 0.7
CLIP2-201ENST00000223398 HARS2P49590 506 aaKnown RBP19.43■□□□□ 0.7
CLIP2-201ENST00000223398 FBXW4P57775 412 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 SEMA3FQ13275 785 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 SLC25A41Q8N5S1 370 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 PCSK9Q8NBP7 692 aaKnown RBP19.43■□□□□ 0.7
CLIP2-201ENST00000223398 DDX27Q96GQ7 796 aaKnown RBP19.43■□□□□ 0.7
CLIP2-201ENST00000223398 ELAC2Q9BQ52 826 aaKnown RBP19.43■□□□□ 0.7
CLIP2-201ENST00000223398 TRPV6Q9H1D0 765 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 APRTP07741 180 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 FAM200BP0CF97 657 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 CDR2Q01850 454 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 TRMT10CQ7L0Y3 403 aaKnown RBP19.43■□□□□ 0.7
CLIP2-201ENST00000223398 GBP5Q96PP8 586 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 SETD4Q9NVD3 440 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 PPP2R3BQ9Y5P8 575 aa19.43■□□□□ 0.7
CLIP2-201ENST00000223398 EIF3DO15371 548 aaKnown RBP eCLIP19.42■□□□□ 0.7
CLIP2-201ENST00000223398 CTIFO43310 598 aaKnown RBP19.42■□□□□ 0.7
CLIP2-201ENST00000223398 ODC1P11926 461 aa19.42■□□□□ 0.7
CLIP2-201ENST00000223398 DNAJB2P25686 324 aa19.42■□□□□ 0.7
CLIP2-201ENST00000223398 RASGRP2Q7LDG7 609 aa19.42■□□□□ 0.7
CLIP2-201ENST00000223398 PPHLN1Q8NEY8 458 aaKnown RBP19.42■□□□□ 0.7
CLIP2-201ENST00000223398 RDM1Q8NG50 284 aa19.42■□□□□ 0.7
CLIP2-201ENST00000223398 EHD2Q9NZN4 543 aa19.42■□□□□ 0.7
CLIP2-201ENST00000223398 UBQLN1Q9UMX0 589 aaKnown RBP19.42■□□□□ 0.7
CLIP2-201ENST00000223398 AK9Q5TCS8 1911 aa19.42■□□□□ 0.7
CLIP2-201ENST00000223398 A0A087WUV0 522 aaPredicted RBP19.42■□□□□ 0.7
CLIP2-201ENST00000223398 MMEP08473 750 aa19.42■□□□□ 0.7
CLIP2-201ENST00000223398 ZNF484Q5JVG2 852 aa19.42■□□□□ 0.7
CLIP2-201ENST00000223398 CASS4Q9NQ75 786 aa19.42■□□□□ 0.7
CLIP2-201ENST00000223398 PRR23AA6NEV1 266 aa19.42■□□□□ 0.7
CLIP2-201ENST00000223398 SYTL3Q4VX76 610 aa19.42■□□□□ 0.7
CLIP2-201ENST00000223398 METTL5Q9NRN9 209 aaKnown RBP19.42■□□□□ 0.7
CLIP2-201ENST00000223398 COBLL1Q53SF7 1204 aa19.42■□□□□ 0.7
CLIP2-201ENST00000223398 GPC2Q8N158 579 aa19.42■□□□□ 0.7
CLIP2-201ENST00000223398 SLC1A1P43005 524 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 BFSP2Q13515 415 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 GTF2H3Q13889 308 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 ARHGAP15Q53QZ3 475 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 TDRD10Q5VZ19 366 aaKnown RBP19.41■□□□□ 0.7
CLIP2-201ENST00000223398 SYT2Q8N9I0 419 aaPredicted RBP19.41■□□□□ 0.7
CLIP2-201ENST00000223398 TRAIPQ9BWF2 469 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 SOX10P56693 466 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 EDRF1Q3B7T1 1238 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 OSMRQ99650 979 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 SLC30A10Q6XR72 485 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 ADCK2Q7Z695 626 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 RCOR2Q8IZ40 523 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 CDCA5Q96FF9 252 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 MS4A14Q96JA4 679 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 ZFATQ9P243 1243 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 HMGB1P1B2RPK0 211 aaPredicted RBP19.41■□□□□ 0.7
CLIP2-201ENST00000223398 SPAG7O75391 227 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 MTM1Q13496 603 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 ARHGEF7Q14155 803 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 SLC18A3Q16572 532 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 ATP11CQ8NB49 1132 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 MTMR12Q9C0I1 747 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 EPC1Q9H2F5 836 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 TRIM17Q9Y577 477 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 PREX1Q8TCU6 1659 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 HSPA8P11142 646 aaKnown RBP19.41■□□□□ 0.7
CLIP2-201ENST00000223398 PTK2BQ14289 1009 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 GMCL1P1Q8NEA9 526 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 P2RX7Q99572 595 aaKnown RBP19.41■□□□□ 0.7
CLIP2-201ENST00000223398 EFHD1Q9BUP0 239 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 YIPF2Q9BWQ6 316 aa19.41■□□□□ 0.7
CLIP2-201ENST00000223398 MRPL46Q9H2W6 279 aaKnown RBP19.41■□□□□ 0.7
CLIP2-201ENST00000223398 POLR1AO95602 1720 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms