RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 TXNP10599 105 aaKnown RBP13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 FNTAP49354 379 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 KIF22Q14807 665 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 SMTNL2Q2TAL5 461 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 SYCP2LQ5T4T6 812 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 IQCKQ8N0W5 287 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 C1orf131Q8NDD1 294 aaKnown RBP13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 P2RX7Q99572 595 aaKnown RBP13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 COL20A1Q9P218 1284 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 UBIAD1Q9Y5Z9 338 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 TOGARAM1Q9Y4F4 1720 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 BTNL10A8MVZ5 291 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 AGPSO00116 658 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 STK10O94804 968 aaKnown RBP13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 MT-ND3P03897 115 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 RPS12P25398 132 aaKnown RBP13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 RPL21P46778 160 aaKnown RBP13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 Q3C1V9 767 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 FAM102AQ5T9C2 384 aaPredicted RBP13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 ANKMY2Q8IV38 441 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 CCDC110Q8TBZ0 833 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 HES6Q96HZ4 224 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 C2orf40Q9H1Z8 148 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 WRAP73Q9P2S5 460 aaPredicted RBP13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 C4AP0C0L4 1744 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 C4BP0C0L5 1744 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 TMEM120BA0PK00 339 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 ASTN2O75129 1339 aaPredicted RBP13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 GTF2BQ00403 316 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 CYP4A22Q5TCH4 519 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 CCDC62Q6P9F0 684 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 ZC3H18Q86VM9 953 aaKnown RBP13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 TRIM50Q86XT4 487 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 MAP4K3Q8IVH8 894 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 FEZF2Q8TBJ5 459 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 RILPQ96NA2 401 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 TGS1Q96RS0 853 aaKnown RBP13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 MTMR12Q9C0I1 747 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 FAM53CQ9NYF3 392 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 SEPT10Q9P0V9 454 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 TCF7P36402 384 aaPredicted RBP13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 MAP2K2P36507 400 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 CCNA1P78396 465 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 VSIG10LQ86VR7 867 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 CCDC60Q8IWA6 550 aaPredicted RBP13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 TMEM161BQ8NDZ6 487 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 PRPF31Q8WWY3 499 aaKnown RBP13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 CAPN9O14815 690 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 CDH16O75309 829 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 PHKA2P46019 1235 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 ARL4CP56559 192 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 NLRP11P59045 1033 aaKnown RBP13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 CNTN2Q02246 1040 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 ACTN3Q08043 901 aaPredicted RBP13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 SPARCL1Q14515 664 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 ZNF449Q6P9G9 518 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 NME8Q8N427 588 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 RNF169Q8NCN4 708 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 OR6B3Q8NGW1 331 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 UBR2Q8IWV8 1755 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 ZBED1O96006 694 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 KRT7P08729 469 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 RPSAP08865 295 aaKnown RBP13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 RARGP13631 454 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 RASSF2P50749 326 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 MRPS9P82933 396 aaKnown RBP13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 MYO1EQ12965 1108 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 SGSM1Q2NKQ1 1148 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 ZNF677Q86XU0 584 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 A1CFQ9NQ94 594 aaKnown RBP13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 NEU2Q9Y3R4 380 aa13.08□□□□□ -0.32
TM9SF4-201ENST00000217315 CHD4Q14839 1912 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 TNFRSF8P28908 595 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 FLT3P36888 993 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 CLNS1AP54105 237 aaKnown RBP13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 ORC1Q13415 861 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 CLEC16AQ2KHT3 1053 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 ICE2Q659A1 982 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 STMN2Q93045 179 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 CDC42EP4Q9H3Q1 356 aaKnown RBP13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 IRS2Q9Y4H2 1338 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 GJB6O95452 261 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 HOXD13P35453 343 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 ANO5Q75V66 913 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 RCOR2Q8IZ40 523 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 MCOLN2Q8IZK6 566 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 LRRC57Q8N9N7 239 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 TTC13Q8NBP0 860 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 SREK1Q8WXA9 508 aaKnown RBP13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 CFAP36Q96G28 342 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 NIF3L1Q9GZT8 377 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 FGFR1OP2Q9NVK5 253 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 TIAM2Q8IVF5 1701 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 NAMPTP43490 491 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 AP3M2P53677 418 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 NFX1Q12986 1120 aaKnown RBP13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 MXD4Q14582 209 aaPredicted RBP13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 TTLL4Q14679 1199 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 CFAP157Q5JU67 520 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 CATSPER4Q7RTX7 472 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms