RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Rnf135Q9CWS1 417 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Tmx2Q9D710 295 aaKnown RBP13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Ccdc182Q9D9C6 152 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Tnni1Q9WUZ5 187 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Gm13084A2A8N0 494 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Prom1O54990 867 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Il27raO70394 623 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Magea8O89012 320 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Ca8P28651 291 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Siah1bQ06985 282 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 PoliQ6R3M4 717 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 OafQ8QZR4 282 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 1700013H16RikQ9DAC5 291 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Kcnq2Q9Z351 759 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Efcab12V9GXH0 673 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Col5a2Q3U962 1497 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Tjp1P39447 1745 aaKnown RBP13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Myh3P13541 1940 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 SarsP26638 512 aaKnown RBP13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Casp2P29594 452 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Champ1Q8K327 802 aaKnown RBP13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Asb11Q9CQ31 323 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Tsc1Q9EP53 1161 aa13.99□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Gm6657A0A1B0GRJ3 277 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Celf5D3Z4T1 395 aaKnown RBP13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Pabpn1lQ5XFR0 273 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Avpr1aQ62463 423 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Pla2g4cQ64GA5 597 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Kiaa1841Q68FF0 718 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Impg2Q80XH2 1243 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 NkrfQ8BY02 690 aaKnown RBP13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Prpsap2Q8R574 369 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Me2Q99KE1 589 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Sfmbt1Q9JMD1 863 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Edf1Q9JMG1 148 aaKnown RBP13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Prmt2Q9R144 448 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Gm15262A0A140LIQ5 728 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Scgb2b7D3YYY1 112 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Ift81O35594 676 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Grik5Q61626 979 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Tfe3Q64092 572 aaKnown RBP13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Nr2e1Q64104 385 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Dars2Q8BIP0 653 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Atp13a1Q9EPE9 1200 aaKnown RBP13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Arih1Q9Z1K5 555 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Ggt5Q9Z2A9 573 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Vmn2r121A2BE32 847 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Cyth3O08967 399 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 MafgO54790 162 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Rbp3P49194 1234 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Bcar1Q61140 874 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Oca2Q62052 833 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Tmem260Q8BMD6 703 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Mical2Q8BML1 960 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Map1sQ8C052 973 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 MslnlQ8C160 685 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 BlmhQ8R016 455 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Sppl3Q9CUS9 384 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Snf8Q9CZ28 258 aa13.98□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Rnf113a2Q14B01 337 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Havcr2Q8VIM0 281 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Abcg3Q99P81 650 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Atp6v1e2Q9D593 226 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Mroh7A2AVR2 1279 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Skint3A7TZF0 458 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Cdo1P60334 200 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Skap1Q3UUV5 355 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 E2f5Q61502 335 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Nlrp4fQ66X05 959 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Pak4Q8BTW9 593 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Rfx6Q8C7R7 927 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Rpp40Q8R1F9 363 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 RnpepQ8VCT3 650 aaKnown RBP13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Thumpd2Q9CZB3 528 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Cpne8Q9DC53 577 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Lypla2Q9WTL7 231 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Lta4hP24527 611 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Arl4aP61213 200 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Smyd1P97443 490 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Grm1P97772 1199 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Xpnpep1Q6P1B1 623 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 EmsyQ8BMB0 1264 aaKnown RBP13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Unc5bQ8K1S3 945 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Tasp1Q8R1G1 420 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Rpn1Q91YQ5 608 aaKnown RBP13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Tjap1Q9DCD5 539 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Sept6Q9R1T4 434 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Slc22a3Q9WTW5 551 aa13.97□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Unc13dB2RUP2 1085 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Epha3P29319 983 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Ccr1P51675 355 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Arpp19P56212 112 aaKnown RBP13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Rrp36Q3UFY0 244 aaKnown RBP13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Prom2Q3UUY6 835 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Phf8Q80TJ7 1023 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Rtfdc1Q99K95 307 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Fuca2Q99KR8 461 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Gps1Q99LD4 471 aaKnown RBP13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Rmi1Q9D4G9 616 aa13.96□□□□□ -0.17
Pdgfra-205ENSMUST00000201711 Astn1Q61137 1302 aa13.96□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms