RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Arhgef10Q8C033 1345 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 Cd70O55237 195 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 GzmgP13366 248 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 RcvrnP34057 202 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 Kcnn2P58390 839 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 EnahQ03173 802 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 Capn13Q3UW68 665 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 Birc2Q62210 612 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 Stk38lQ7TSE6 464 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 Impg2Q80XH2 1243 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 Ankfy1Q810B6 1169 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 Orai2Q8BH10 250 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 Stard7Q8R1R3 373 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 PawrQ925B0 333 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 Psmd6Q99JI4 389 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 Iqcf1Q9D9K8 182 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 Rbp7Q9EPC5 134 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 Rnf14Q9JI90 485 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 Pdzd4Q9QY39 772 aa13.69□□□□□ -0.22
Nup88-203ENSMUST00000108531 Rad54lP70270 747 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Vamp7P70280 220 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Ptgs2Q05769 604 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Gpr156Q6PCP7 798 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Sh2d5Q8JZW5 429 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Armc9Q9D2I5 817 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Olig1Q9JKN5 260 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 AuhQ9JLZ3 314 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Rabgef1Q9JM13 491 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Card9A2AIV8 536 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 EloblA6PWE0 161 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Eef1dP57776 281 aaKnown RBP13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Map4k1P70218 827 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Ugt1a2P70691 533 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 4930502E18RikQ14BQ3 236 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Upf3bQ3ULL6 472 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Dsg1aQ61495 1057 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Pgrmc2Q80UU9 217 aaKnown RBP13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Dupd1Q8BK84 215 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Dnali1Q8BVN8 258 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Leg1Q8C6C9 337 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Stxbp5Q8K400 1152 aaKnown RBP13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Lars2Q8VDC0 902 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 St13Q99L47 371 aaKnown RBP13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Tnpo2Q99LG2 887 aaKnown RBP13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Tdrd12Q9CWU0 1215 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Fundc1Q9DB70 155 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Cetn2Q9R1K9 172 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Slc22a3Q9WTW5 551 aa13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Noc2lQ9WV70 747 aaKnown RBP13.68□□□□□ -0.22
Nup88-203ENSMUST00000108531 Ripor3A1L3T7 938 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Prdm12A2AJ77 365 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 March10E9PX79 788 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Speer2E9Q9U2 264 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 E2f6O54917 272 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 AfmO89020 608 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Mt-CybP00158 381 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 PrlP06879 226 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Fgfr1P16092 822 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Bcat1P24288 386 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Tbx3P70324 741 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Atp13a5Q3TYU2 1216 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Atl2Q6PA06 583 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Gm2163Q6PCY5 473 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Wasf2Q8BH43 497 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Rab44Q8CB87 725 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Uroc1Q8VC12 676 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Rpa1Q8VEE4 623 aaKnown RBP13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Acot11Q8VHQ9 594 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Pcdha2Q91Y17 948 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Polr3fQ921X6 316 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Scgb2b21A0A087WQA9 112 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Bfsp1A2AMT1 669 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Olfr247E9PVJ7 320 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Eddm13E9Q7F5 164 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Gm6583E9Q8Z1 469 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Olfr819K7N727 320 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Unc5cO08747 931 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 P01734 135 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 PctpP53808 214 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 SbdsP70122 250 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 MregQ6NVG5 214 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Znf618Q80YY7 953 aaKnown RBP13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Pdzph1Q8BGR1 1238 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 ClasrpQ8CFC7 668 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Olfr1499Q8VG65 314 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Ddx24Q9ESV0 857 aaKnown RBP13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Anxa9Q9JHQ0 345 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Sbf2E9PXF8 1872 aa13.67□□□□□ -0.22
Nup88-203ENSMUST00000108531 Ttc17E9PVB5 1198 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Nr3c1P06537 783 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Cxcr2P35343 359 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Uchl4P58321 233 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Drp2Q05AA6 957 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Plk1Q07832 603 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Ppm1jQ149T7 507 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Lgr6Q3UVD5 967 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Trim80Q3V061 624 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Heatr3Q8BQM4 679 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Tph2Q8CGV2 488 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Haus3Q8QZX2 570 aa13.66□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms