RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Ttc17E9PVB5 1198 aa15.96■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Fundc1Q9DB70 155 aa15.96■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Cables1Q9ESJ1 568 aa15.96■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Nfs1Q9Z1J3 459 aa15.96■□□□□ 0.15
Nkx3-1-201ENSMUST00000022646 Zswim8Q3UHH1 1832 aaKnown RBP15.96■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Usp35M0QWN7 1009 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 MafbP54841 323 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Plk4Q64702 925 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Znf507Q6ZPY5 941 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Gpr150Q8BL07 427 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 AgpsQ8C0I1 645 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Ttc8Q8VD72 515 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Gpihbp1Q9D1N2 228 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Orc3Q9JK30 715 aaKnown RBP15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Glt1d1A4FUP9 346 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 March10E9PX79 788 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Oog1E9Q5G7 496 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Serpinb6eI7HJI3 429 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Zdhhc18Q5Y5T2 380 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Adat2Q6P6J0 191 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Zswim5Q80TC6 1188 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Mapk15Q80Y86 549 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 ItpkaQ8R071 459 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Tspan8Q8R3G9 235 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 CactinQ9CS00 772 aaKnown RBP15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Chordc1Q9D1P4 331 aaKnown RBP15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Rpap3Q9D706 660 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Cry2Q9R194 592 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Mtmr1Q9Z2C4 669 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Nat8lQ3UGX3 299 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Uba6Q8C7R4 1053 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Tdrd12Q9CWU0 1215 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Ccdc182Q9D9C6 152 aa15.95■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Nup62clA2AG10 272 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Srsf11E9Q6E5 511 aaKnown RBP15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Cacna2d1O08532 1103 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Magea5O89009 320 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Magea8O89012 320 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 PtpreP49446 699 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Trmt1Q3TX08 663 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Magea3Q6T340 320 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 6820408C15RikQ8BJX2 354 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Kdm1bQ8CIG3 826 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Gpatch1Q9DBM1 930 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Gm5795E9PZN8 263 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Speer2E9Q9U2 264 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Gm21962L7N280 338 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Stra6O70491 670 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Eno1P17182 434 aaKnown RBP15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Irx1P81068 480 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Drp2Q05AA6 957 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Ppm1jQ149T7 507 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Scaf8Q6DID3 1268 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Tmc8Q7TN58 722 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 SnphQ80U23 495 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Pak4Q8BTW9 593 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Abcf3Q8K268 709 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Uroc1Q8VC12 676 aa15.94■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Col4a3Q9QZS0 1669 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Tldc2A2ACG1 198 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 IqccA2ADZ8 418 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 PdgfraP26618 1089 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Pih1d3Q3KNI6 218 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Tdpoz2Q717B2 364 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Q80WR5 230 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Zfp120Q8BZW4 436 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Tmx4Q8C0L0 335 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Cplx3Q8R1B5 158 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Taf1dQ9D4V4 322 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Iqcf1Q9D9K8 182 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Mmp10O55123 476 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Nr3c1P06537 783 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 EpoP07321 192 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Bmp2P21274 394 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Rps12P63323 132 aaKnown RBP15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Ptprn2P80560 1001 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Ddr1Q03146 911 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Vil1Q62468 827 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Ugt3a2Q8JZZ0 523 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Olfr390Q8VEZ7 311 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Cdk5rap3Q99LM2 503 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 IqcdQ9D3V1 458 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Dkc1Q9ESX5 509 aaKnown RBP15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Slc22a3Q9WTW5 551 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Gm28360A0A087WR25 190 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Prkg1P0C605 671 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 L1camP11627 1260 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 PrphP15331 475 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Tnni3P48787 211 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Tom1l2Q5SRX1 507 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Sec23ipQ6NZC7 998 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Plppr4Q7TME0 766 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Impg2Q80XH2 1243 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 SncbQ91ZZ3 133 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Ivns1abpQ920Q8 642 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Pard6bQ9JK83 371 aa15.93■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Lig3P97386 1015 aa15.92■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Col6a1Q04857 1025 aa15.92■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Atp13a5Q3TYU2 1216 aa15.92■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Camta2Q80Y50 1208 aa15.92■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms