RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Fmr1P35922 614 aaKnown RBP17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Ranbp9P69566 653 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 rp9P97762 213 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Q3TTJ4 293 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 FancbQ5XJY6 703 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Spata24Q6P926 205 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Kiaa1024Q8K3V7 917 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 TarsQ9D0R2 722 aaKnown RBP17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Pabpc6Q9D4E6 643 aaKnown RBP17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Tlk2O55047 718 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Serpina1aP07758 413 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Xrcc5P27641 732 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Serpina1cQ00896 412 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Serpina1dQ00897 413 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Grik1Q60934 836 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Sema5aQ62217 1077 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Jade3Q6IE82 823 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Rtp1Q8C8C1 263 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Rab44Q8CB87 725 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Usp26Q99MX1 835 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Bcl2l12Q9D3J3 255 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Tnfrsf18O35714 228 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Tmem165P52875 323 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Slc24a2Q14BI1 711 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Ints8Q80V86 995 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Nop53Q8BK35 484 aaKnown RBP17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Dnali1Q8BVN8 258 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 IydQ9DCX8 285 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Ccdc22Q9JIG7 627 aa17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Top3bQ9Z321 862 aaKnown RBP17.86■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Farp1F8VPU2 1048 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Zbtb11G5E8B9 1050 aaKnown RBP17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Ampd1Q3V1D3 745 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Gm14685Q52KH6 695 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Depdc1bQ8BH88 529 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Zfp263Q8CF60 680 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Slc26a6Q8CIW6 758 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Nmrk1Q91W63 195 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Adi1Q99JT9 179 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Rps6ka4Q9Z2B9 773 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Lonrf2B2RT44 518 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Atf2P16951 487 aaKnown RBP17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Aimp1P31230 310 aaKnown RBP17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 AdssP46664 456 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Zhx2Q8C0C0 836 aaKnown RBP17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Ago4Q8CJF8 861 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Mrps9Q9D7N3 390 aaKnown RBP17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Jph2Q9ET78 696 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Tmed2Q9R0Q3 201 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Kif9Q9WV04 790 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Dusp8O09112 663 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Arhgap45Q3TBD2 1116 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Brip1Q5SXJ3 1174 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 OcrlQ6NVF0 900 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Vmn2r26Q6TAC4 855 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Tyw3Q8BSA9 257 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 MypopQ8R4U1 393 aa17.85■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Cyp2a4P15392 494 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Cyp2a5P20852 494 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Q3V0E1 1183 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Gata6Q61169 589 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Trim24Q64127 1051 aaKnown RBP17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Tubgcp5Q8BKN5 1024 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Ppme1Q8BVQ5 386 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Osbpl2Q8BX94 484 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Sun1Q9D666 913 aaKnown RBP17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Usp17ldG5E8G2 545 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Usp17lcG5E8I7 545 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 4930544D05RikJ3QK56 214 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Gm7995L7N2E4 160 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Cyp11b1Q3TG86 501 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Fnbp4Q6ZQ03 1031 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 BC048507Q80ZS7 89 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Srp68Q8BMA6 625 aaKnown RBP17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Creb5Q8K1L0 357 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Cyp2a22B2RXZ2 492 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Ap1g1P22892 822 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 RalaP63321 206 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Pdp2Q504M2 532 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Epc2Q8C0I4 808 aa17.84■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Gm16430A6X8J1 155 aa17.83■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Galntl6E5D8G1 601 aa17.83■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Scarf2P59222 833 aa17.83■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Gbp8Q2V6D6 525 aa17.83■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Impg2Q80XH2 1243 aa17.83■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Enox2Q8R0Z2 598 aa17.83■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Ascc2Q91WR3 749 aa17.83■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Slc25a38Q91XD8 326 aa17.83■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Slxl1Q9D515 155 aa17.83■□□□□ 0.45
Ctcf-201ENSMUST00000005841 Sfmbt1Q9JMD1 863 aa17.83■□□□□ 0.45
Ctcf-201ENSMUST00000005841 1700003F12RikA2AKE5 210 aa17.83■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Krt90E9Q1Z0 538 aa17.83■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Nub1P54729 614 aa17.83■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Gtf2bP62915 316 aa17.83■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Tigd5Q499M4 642 aa17.83■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Odr4Q4PJX1 447 aa17.83■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Zbtb7bQ64321 544 aa17.83■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Chmp2bQ8BJF9 213 aa17.83■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Nat14Q8BVG8 206 aa17.83■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Gimap5Q8BWF2 308 aa17.83■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms