RNA–Protein interactions for RNA: snR60

snR60, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR60, Length 104 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR60snR60 CWC27Q02770 301 aa-0.08□□□□□ -2.42
snR60snR60 RCE1Q03530 315 aa-0.08□□□□□ -2.42
snR60snR60 TRM12Q04235 462 aa-0.08□□□□□ -2.42
snR60snR60 GMC2Q06201 188 aa-0.08□□□□□ -2.42
snR60snR60 IPP1P00817 287 aaKnown RBP-0.09□□□□□ -2.42
snR60snR60 FCY2P17064 533 aa-0.09□□□□□ -2.42
snR60snR60 ERD2P18414 219 aa-0.09□□□□□ -2.42
snR60snR60 UGX2P32772 223 aa-0.09□□□□□ -2.42
snR60snR60 MRPL39P36533 70 aa-0.09□□□□□ -2.42
snR60snR60 OSW5P40219 148 aa-0.09□□□□□ -2.42
snR60snR60 YNR077CP53758 84 aa-0.09□□□□□ -2.42
snR60snR60 YDR286CQ05530 114 aa-0.09□□□□□ -2.42
snR60snR60 YHR139C-AO13536 103 aa-0.1□□□□□ -2.43
snR60snR60 HIS1P00498 297 aaKnown RBP-0.1□□□□□ -2.43
snR60snR60 TPM1P17536 199 aaKnown RBP-0.1□□□□□ -2.43
snR60snR60 RPS5P26783 225 aaKnown RBP-0.1□□□□□ -2.43
snR60snR60 YET1P35723 206 aa-0.1□□□□□ -2.43
snR60snR60 YBR063CP38083 404 aa-0.1□□□□□ -2.43
snR60snR60 YBR096WP38256 230 aa-0.1□□□□□ -2.43
snR60snR60 YBR209WP38311 105 aa-0.1□□□□□ -2.43
snR60snR60 YEA4P40004 342 aa-0.1□□□□□ -2.43
snR60snR60 SMB1P40018 196 aaKnown RBP-0.1□□□□□ -2.43
snR60snR60 SNZ2P53824 298 aa-0.1□□□□□ -2.43
snR60snR60 YNL247WP53852 767 aaKnown RBP-0.1□□□□□ -2.43
snR60snR60 ALG11P53954 548 aaKnown RBP-0.1□□□□□ -2.43
snR60snR60 FMP16Q12497 93 aa-0.1□□□□□ -2.43
snR60snR60 REP2P03872 296 aa-0.11□□□□□ -2.43
snR60snR60 HOM6P31116 359 aaKnown RBP-0.11□□□□□ -2.43
snR60snR60 MRPL40P36534 297 aa-0.11□□□□□ -2.43
snR60snR60 UMP1P38293 148 aa-0.11□□□□□ -2.43
snR60snR60 PRS2P38620 318 aaKnown RBP-0.11□□□□□ -2.43
snR60snR60 GAS3Q03655 524 aa-0.11□□□□□ -2.43
snR60snR60 YPL229WQ99395 206 aa-0.11□□□□□ -2.43
snR60snR60 SPT7P35177 1332 aa-0.12□□□□□ -2.43
snR60snR60 OPY1P38271 328 aa-0.12□□□□□ -2.43
snR60snR60 KAP114P53067 1004 aa-0.12□□□□□ -2.43
snR60snR60 YNL010WP53981 241 aaKnown RBP-0.12□□□□□ -2.43
snR60snR60 OST6Q03723 332 aa-0.12□□□□□ -2.43
snR60snR60 YPR098CQ06089 161 aa-0.12□□□□□ -2.43
snR60snR60 FSF1Q12029 327 aaKnown RBP-0.12□□□□□ -2.43
snR60snR60 TRX1P22217 103 aaKnown RBP-0.13□□□□□ -2.43
snR60snR60 CAT5P41735 233 aa-0.13□□□□□ -2.43
snR60snR60 DID2P69771 204 aa-0.13□□□□□ -2.43
snR60snR60 ABF2Q02486 183 aa-0.13□□□□□ -2.43
snR60snR60 DIG2Q03373 323 aaKnown RBP-0.13□□□□□ -2.43
snR60snR60 YOR029WQ12243 111 aa-0.13□□□□□ -2.43
snR60snR60 MRPS28P21771 286 aa-0.14□□□□□ -2.43
snR60snR60 SGE1P33335 543 aa-0.14□□□□□ -2.43
snR60snR60 REX3Q12090 404 aa-0.14□□□□□ -2.43
snR60snR60 COX2P00410 251 aa-0.15□□□□□ -2.43
snR60snR60 SHE2P36068 246 aaKnown RBP RIP-Chip data-0.15□□□□□ -2.43not detected
snR60snR60 GLG2P47011 380 aa-0.15□□□□□ -2.43
snR60snR60 ILM1P47155 203 aa-0.15□□□□□ -2.43
snR60snR60 YML096WQ04489 525 aa-0.15□□□□□ -2.43
snR60snR60 YMR252CQ04814 134 aa-0.15□□□□□ -2.43
snR60snR60 SSQ1Q05931 657 aaPredicted RBP-0.15□□□□□ -2.43
snR60snR60 SEI1Q06058 285 aa-0.15□□□□□ -2.43
snR60snR60 MDY2Q12285 212 aa-0.15□□□□□ -2.43
snR60snR60 ATG40Q99325 256 aa-0.15□□□□□ -2.43
snR60snR60 STP22P25604 385 aa-0.16□□□□□ -2.44
snR60snR60 SNC2P33328 115 aa-0.16□□□□□ -2.44
snR60snR60 YKL075CP36083 450 aa-0.16□□□□□ -2.44
snR60snR60 VMA22P38784 181 aa-0.16□□□□□ -2.44
snR60snR60 HYR1P40581 163 aaKnown RBP-0.16□□□□□ -2.44
snR60snR60 YHR007C-AQ07074 71 aa-0.16□□□□□ -2.44
snR60snR60 YLR236CA0A023PZG4 107 aa-0.17□□□□□ -2.44
snR60snR60 SEC11P15367 167 aa-0.17□□□□□ -2.44
snR60snR60 IRC22P40006 225 aa-0.17□□□□□ -2.44
snR60snR60 YFH7P43591 353 aa-0.17□□□□□ -2.44
snR60snR60 YAR1P46683 200 aa-0.17□□□□□ -2.44
snR60snR60 SSK22P25390 1331 aaPredicted RBP-0.17□□□□□ -2.44
snR60snR60 RPT5P33297 434 aaKnown RBP-0.18□□□□□ -2.44
snR60snR60 PRX1P34227 261 aaKnown RBP-0.18□□□□□ -2.44
snR60snR60 MRPL17P36528 281 aa-0.18□□□□□ -2.44
snR60snR60 URA8P38627 578 aaPredicted RBP-0.18□□□□□ -2.44
snR60snR60 YHR127WP38833 243 aaKnown RBP-0.18□□□□□ -2.44
snR60snR60 USE1P53146 245 aa-0.18□□□□□ -2.44
snR60snR60 SED1Q01589 338 aa-0.18□□□□□ -2.44
snR60snR60 SWP1Q02795 286 aa-0.18□□□□□ -2.44
snR60snR60 GPM2Q12008 311 aa-0.18□□□□□ -2.44
snR60snR60 FMP49A0A023PZB3 126 aa-0.19□□□□□ -2.44
snR60snR60 DBP3P20447 523 aaKnown RBP-0.19□□□□□ -2.44
snR60snR60 RIB1P38066 345 aa-0.19□□□□□ -2.44
snR60snR60 BFR1P38934 470 aaKnown RBP RIP-Chip data-0.19□□□□□ -2.44not detected
snR60snR60 YDR248CQ03786 193 aa-0.19□□□□□ -2.44
snR60snR60 CSM4Q08955 156 aa-0.19□□□□□ -2.44
snR60snR60 TUS1Q06412 1307 aa-0.19□□□□□ -2.44
snR60snR60 MDM35O60200 86 aa-0.2□□□□□ -2.44
snR60snR60 SIR2P06700 562 aa-0.2□□□□□ -2.44
snR60snR60 YPR170W-BP0C5R9 85 aa-0.2□□□□□ -2.44
snR60snR60 YLR156WP0CE96 114 aa-0.2□□□□□ -2.44
snR60snR60 YLR159WP0CE97 114 aa-0.2□□□□□ -2.44
snR60snR60 YLR161WP0CE98 114 aa-0.2□□□□□ -2.44
snR60snR60 YER034WP40022 185 aaKnown RBP-0.2□□□□□ -2.44
snR60snR60 CUE4Q04201 117 aaPredicted RBP-0.2□□□□□ -2.44
snR60snR60 YLR413WQ06689 675 aa-0.2□□□□□ -2.44
snR60snR60 TSC3Q3E790 80 aa-0.2□□□□□ -2.44
snR60snR60 MRP1P10662 321 aaKnown RBP-0.21□□□□□ -2.44
snR60snR60 DAL82P21705 255 aa-0.21□□□□□ -2.44
snR60snR60 MRPL28P36527 147 aa-0.21□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 60.2 ms