RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W MHT1Q12525 324 aa2.81□□□□□ -1.96
VPS28YPL065W RPL28P02406 149 aaKnown RBP2.8□□□□□ -1.96
VPS28YPL065W CDC33P07260 213 aaKnown RBP2.8□□□□□ -1.96
VPS28YPL065W VMA11P32842 164 aa2.8□□□□□ -1.96
VPS28YPL065W PRP18P33411 251 aaPredicted RBP2.8□□□□□ -1.96
VPS28YPL065W YOR062CP36025 268 aa2.8□□□□□ -1.96
VPS28YPL065W ECM33P38248 429 aaKnown RBP2.8□□□□□ -1.96
VPS28YPL065W MNN5P46982 586 aa2.8□□□□□ -1.96
VPS28YPL065W RAD17P48581 401 aa2.8□□□□□ -1.96
VPS28YPL065W PGA2P53903 129 aa2.8□□□□□ -1.96
VPS28YPL065W EMC6Q12431 108 aa2.8□□□□□ -1.96
VPS28YPL065W CDC28P00546 298 aaKnown RBP2.79□□□□□ -1.96
VPS28YPL065W STE18P18852 110 aa2.79□□□□□ -1.96
VPS28YPL065W YBR063CP38083 404 aa2.79□□□□□ -1.96
VPS28YPL065W YJR056CP47115 236 aa2.79□□□□□ -1.96
VPS28YPL065W SSQ1Q05931 657 aaPredicted RBP2.79□□□□□ -1.96
VPS28YPL065W DCN1Q12395 269 aa2.79□□□□□ -1.96
VPS28YPL065W YDR157WA0A023PZE8 133 aa2.78□□□□□ -1.96
VPS28YPL065W DBF2P22204 572 aa2.78□□□□□ -1.96
VPS28YPL065W NTG1P31378 399 aa2.78□□□□□ -1.96
VPS28YPL065W GRE3P38715 327 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
VPS28YPL065W YRB1P41920 201 aaKnown RBP2.78□□□□□ -1.96
VPS28YPL065W NUP57P48837 541 aa2.78□□□□□ -1.96
VPS28YPL065W BRR6P53062 197 aa2.78□□□□□ -1.96
VPS28YPL065W DRS2P39524 1355 aa2.77□□□□□ -1.97
VPS28YPL065W CDC36P06100 191 aaPredicted RBP2.77□□□□□ -1.97
VPS28YPL065W ADO1P47143 340 aaKnown RBP2.77□□□□□ -1.97
VPS28YPL065W CWC23P52868 283 aaPredicted RBP2.77□□□□□ -1.97
VPS28YPL065W MGA1P53050 456 aa2.77□□□□□ -1.97
VPS28YPL065W ABF2Q02486 183 aa2.77□□□□□ -1.97
VPS28YPL065W PUT1P09368 476 aa2.76□□□□□ -1.97
VPS28YPL065W YPR170W-BP0C5R9 85 aa2.76□□□□□ -1.97
VPS28YPL065W OAC1P32332 324 aa2.76□□□□□ -1.97
VPS28YPL065W YKT6P36015 200 aaKnown RBP2.76□□□□□ -1.97
VPS28YPL065W YOR283WQ12040 230 aaKnown RBP2.76□□□□□ -1.97
VPS28YPL065W GRX2P17695 143 aaKnown RBP2.75□□□□□ -1.97
VPS28YPL065W RPB4P20433 221 aaPredicted RBP2.75□□□□□ -1.97
VPS28YPL065W FCY21P40039 528 aa2.75□□□□□ -1.97
VPS28YPL065W YJL027CP47063 138 aaPredicted RBP2.75□□□□□ -1.97
VPS28YPL065W BXI1P48558 297 aa2.75□□□□□ -1.97
VPS28YPL065W YMD8Q03697 442 aa2.75□□□□□ -1.97
VPS28YPL065W GRX3Q03835 250 aa2.75□□□□□ -1.97
VPS28YPL065W BNA7Q04066 261 aa2.75□□□□□ -1.97
VPS28YPL065W JLP1Q12358 412 aa2.75□□□□□ -1.97
VPS28YPL065W ATO3Q12359 275 aa2.75□□□□□ -1.97
VPS28YPL065W NCB2Q92317 146 aa2.75□□□□□ -1.97
VPS28YPL065W RPL9AP05738 191 aaKnown RBP2.74□□□□□ -1.97
VPS28YPL065W PRX1P34227 261 aaKnown RBP2.74□□□□□ -1.97
VPS28YPL065W DOG2P38773 246 aa2.74□□□□□ -1.97
VPS28YPL065W DOG1P38774 246 aa2.74□□□□□ -1.97
VPS28YPL065W IRC22P40006 225 aa2.74□□□□□ -1.97
VPS28YPL065W YIL001WP40560 513 aa2.74□□□□□ -1.97
VPS28YPL065W RPL9BP51401 191 aaKnown RBP2.74□□□□□ -1.97
VPS28YPL065W YDR248CQ03786 193 aa2.74□□□□□ -1.97
VPS28YPL065W MSW1P04803 379 aa2.73□□□□□ -1.97
VPS28YPL065W PRM15Q03262 622 aa2.73□□□□□ -1.97
VPS28YPL065W ARR2Q06597 130 aa2.73□□□□□ -1.97
VPS28YPL065W YHR086W-AQ3E746 53 aa2.73□□□□□ -1.97
VPS28YPL065W LSO2Q3E772 92 aaKnown RBP2.73□□□□□ -1.97
VPS28YPL065W TAF14P35189 244 aa2.72□□□□□ -1.97
VPS28YPL065W YHR180WP38868 163 aa2.72□□□□□ -1.97
VPS28YPL065W CWC21Q03375 135 aaKnown RBP2.72□□□□□ -1.97
VPS28YPL065W TRM12Q04235 462 aa2.72□□□□□ -1.97
VPS28YPL065W LPP1Q04396 274 aa2.72□□□□□ -1.97
VPS28YPL065W CDC8P00572 216 aa2.71□□□□□ -1.98
VPS28YPL065W NRG2P38082 220 aa2.71□□□□□ -1.98
VPS28YPL065W FAR7P43592 221 aa2.71□□□□□ -1.98
VPS28YPL065W CIS3P47001 227 aa2.71□□□□□ -1.98
VPS28YPL065W YGR219WP53307 113 aa2.71□□□□□ -1.98
VPS28YPL065W YNL010WP53981 241 aaKnown RBP2.71□□□□□ -1.98
VPS28YPL065W DID2P69771 204 aa2.71□□□□□ -1.98
VPS28YPL065W YML108WQ03759 105 aa2.71□□□□□ -1.98
VPS28YPL065W MRPS8Q03799 155 aa2.71□□□□□ -1.98
VPS28YPL065W NEJ1Q06148 342 aa2.71□□□□□ -1.98
VPS28YPL065W PSF1Q12488 208 aa2.71□□□□□ -1.98
VPS28YPL065W RAS2P01120 322 aaKnown RBP2.7□□□□□ -1.98
VPS28YPL065W APS1P35181 156 aa2.7□□□□□ -1.98
VPS28YPL065W TDA8Q6B2U8 126 aa2.7□□□□□ -1.98
VPS28YPL065W SCL1P21243 252 aaKnown RBP2.69□□□□□ -1.98
VPS28YPL065W PEX4P29340 183 aa2.69□□□□□ -1.98
VPS28YPL065W PRM8P53174 237 aa2.69□□□□□ -1.98
VPS28YPL065W ADF1Q2V2Q1 113 aa2.69□□□□□ -1.98
VPS28YPL065W ATG22P25568 528 aa2.68□□□□□ -1.98
VPS28YPL065W IDH1P28834 360 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
VPS28YPL065W MDH3P32419 343 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
VPS28YPL065W SPS18P32572 300 aa2.68□□□□□ -1.98
VPS28YPL065W SIP3P38717 1229 aa2.68□□□□□ -1.98
VPS28YPL065W RSM25P40496 264 aa2.68□□□□□ -1.98
VPS28YPL065W PRM10P42946 383 aa2.68□□□□□ -1.98
VPS28YPL065W IRC18P47056 224 aa2.68□□□□□ -1.98
VPS28YPL065W PDR17P53844 350 aa2.68□□□□□ -1.98
VPS28YPL065W GAS3Q03655 524 aa2.68□□□□□ -1.98
VPS28YPL065W SPG3Q04398 127 aaPredicted RBP2.68□□□□□ -1.98
VPS28YPL065W TUS1Q06412 1307 aa2.68□□□□□ -1.98
VPS28YPL065W REP2P03872 296 aa2.67□□□□□ -1.98
VPS28YPL065W YLR156WP0CE96 114 aa2.67□□□□□ -1.98
VPS28YPL065W YLR159WP0CE97 114 aa2.67□□□□□ -1.98
VPS28YPL065W YLR161WP0CE98 114 aa2.67□□□□□ -1.98
VPS28YPL065W GCN3P14741 305 aa2.67□□□□□ -1.98
VPS28YPL065W TCA17P32613 152 aa2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 77.1 ms