RNA–Protein interactions for RNA: YOR275C

RIM20, Transcript of Protein involved in proteolytic activation of Rim101p, yeast

Gene RIM20, Length 1,986 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM20	YOR275C	SRB4	P32569	687 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	DOG1	P38774	246 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	YHR127W	P38833	243 aa	Known RBP	0.74	□□□□□ -2.29
RIM20	YOR275C	IKI1	P38874	309 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	SHC1	P39000	512 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	AST2	P39945	430 aa	Known RBP	0.74	□□□□□ -2.29
RIM20	YOR275C	COG3	P40094	801 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	BMT5	P40493	336 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	YGL159W	P53110	370 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	ERV29	P53337	310 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	YML096W	Q04489	525 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	PEX10	Q05568	337 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	NIP7	Q08962	181 aa	Known RBP	0.74	□□□□□ -2.29
RIM20	YOR275C	GEP5	Q12393	293 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	NCB2	Q92317	146 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	DRS2	P39524	1355 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	HTB1	P02293	131 aa	Known RBP	0.74	□□□□□ -2.29
RIM20	YOR275C	HTB2	P02294	131 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	URA6	P15700	204 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	STE18	P18852	110 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	SEC17	P32602	292 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	UTP30	P36144	274 aa	Known RBP	0.74	□□□□□ -2.29
RIM20	YOR275C	DRE2	P36152	348 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	YCR087C-A	P37263	153 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	TDA11	P38854	504 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	LSM4	P40070	187 aa	Known RBP	0.74	□□□□□ -2.29
RIM20	YOR275C	YRB1	P41920	201 aa	Known RBP	0.74	□□□□□ -2.29
RIM20	YOR275C	NUP57	P48837	541 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	UBC12	P52491	188 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	RHO3	Q00245	231 aa	Known RBP	0.74	□□□□□ -2.29
RIM20	YOR275C	YDR209C	Q03480	137 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	FAR8	Q05040	523 aa		0.74	□□□□□ -2.29
RIM20	YOR275C	RRP40	Q08285	240 aa	Known RBP	0.74	□□□□□ -2.29
RIM20	YOR275C	SYC1	Q08553	188 aa	Predicted RBP	0.74	□□□□□ -2.29
RIM20	YOR275C	GCN1	P33892	2672 aa	Known RBP	0.73	□□□□□ -2.29
RIM20	YOR275C	YMR316C-A	I2HB70	103 aa		0.73	□□□□□ -2.29
RIM20	YOR275C	IPP1	P00817	287 aa	Known RBP	0.73	□□□□□ -2.29
RIM20	YOR275C	SCO1	P23833	295 aa		0.73	□□□□□ -2.29
RIM20	YOR275C	RPL24B	P24000	155 aa	Known RBP	0.73	□□□□□ -2.29
RIM20	YOR275C	YCR090C	P25654	182 aa	Known RBP	0.73	□□□□□ -2.29
RIM20	YOR275C	CAM1	P29547	415 aa	Known RBP	0.73	□□□□□ -2.29
RIM20	YOR275C	SSO1	P32867	290 aa		0.73	□□□□□ -2.29
RIM20	YOR275C	ECM33	P38248	429 aa	Known RBP	0.73	□□□□□ -2.29
RIM20	YOR275C	FZO1	P38297	855 aa		0.73	□□□□□ -2.29
RIM20	YOR275C	YER121W	P40076	114 aa		0.73	□□□□□ -2.29
RIM20	YOR275C	RFC4	P40339	323 aa	Known RBP	0.73	□□□□□ -2.29
RIM20	YOR275C	CAT5	P41735	233 aa		0.73	□□□□□ -2.29
RIM20	YOR275C	BRR6	P53062	197 aa		0.73	□□□□□ -2.29
RIM20	YOR275C	NSA1	P53136	463 aa	Predicted RBP	0.73	□□□□□ -2.29
RIM20	YOR275C	YGR050C	P53231	118 aa		0.73	□□□□□ -2.29
RIM20	YOR275C	COS6	P53344	381 aa		0.73	□□□□□ -2.29
RIM20	YOR275C	YIP3	P53633	176 aa		0.73	□□□□□ -2.29
RIM20	YOR275C	PDR17	P53844	350 aa		0.73	□□□□□ -2.29
RIM20	YOR275C	SPG3	Q04398	127 aa	Predicted RBP	0.73	□□□□□ -2.29
RIM20	YOR275C	ATG17	Q06410	417 aa		0.73	□□□□□ -2.29
RIM20	YOR275C	YPR147C	Q06522	304 aa	Known RBP	0.73	□□□□□ -2.29
RIM20	YOR275C	SMT3	Q12306	101 aa	Known RBP	0.73	□□□□□ -2.29
RIM20	YOR275C	ATO3	Q12359	275 aa		0.73	□□□□□ -2.29
RIM20	YOR275C	YHR214C-E	Q8TGK0	99 aa		0.73	□□□□□ -2.29
RIM20	YOR275C	LTE1	P07866	1435 aa		0.73	□□□□□ -2.29
RIM20	YOR275C	NUP157	P40064	1391 aa	Known RBP	0.72	□□□□□ -2.29
RIM20	YOR275C	RAS2	P01120	322 aa	Known RBP	0.72	□□□□□ -2.29
RIM20	YOR275C	MER1	P16523	270 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	YPT52	P36018	234 aa	Known RBP	0.72	□□□□□ -2.29
RIM20	YOR275C	PHO89	P38361	574 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.72	□□□□□ -2.29	not detected
RIM20	YOR275C	TCD1	P38756	429 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	RPF1	P38805	295 aa	Known RBP	0.72	□□□□□ -2.29
RIM20	YOR275C	YHB1	P39676	399 aa	Known RBP	0.72	□□□□□ -2.29
RIM20	YOR275C	ICE2	P40499	491 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	YIL001W	P40560	513 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	PRM10	P42946	383 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	GON7	P46984	123 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	SOL1	P50278	321 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	MRPL50	P53724	139 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	YMR279C	Q03263	540 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	BNA7	Q04066	261 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	FUS2	Q05670	677 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	YOL160W	Q08321	113 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	RRS1	Q08746	203 aa	Known RBP	0.72	□□□□□ -2.29
RIM20	YOR275C	YBL008W-A	Q3E821	79 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	BNI1	P41832	1953 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	NTE1	Q04958	1679 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	REP2	P03872	296 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	MRS1	P07266	363 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.72	□□□□□ -2.29	not detected
RIM20	YOR275C	ERG24	P32462	438 aa	Known RBP	0.72	□□□□□ -2.29
RIM20	YOR275C	CLG1	P35190	452 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	MRPL28	P36527	147 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	YER189W	P40104	122 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	YRB2	P40517	327 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	JAC1	P53193	184 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	COG7	P53195	279 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	SNO1	Q03144	224 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	YRA1	Q12159	226 aa	Known RBP	0.72	□□□□□ -2.29
RIM20	YOR275C	JLP1	Q12358	412 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	YFR032C-B	Q8TGU2	87 aa		0.72	□□□□□ -2.29
RIM20	YOR275C	YLR462W	O13556	202 aa		0.71	□□□□□ -2.3
RIM20	YOR275C	CDC7	P06243	507 aa		0.71	□□□□□ -2.3
RIM20	YOR275C	YHR032W-A	P0C5N6	59 aa		0.71	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms