RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W ARG5,6Q01217 863 aa5.5□□□□□ -1.53
LSC1YOR142W YMR130WQ04223 302 aa5.5□□□□□ -1.53
LSC1YOR142W KEI1Q06346 221 aa5.5□□□□□ -1.53
LSC1YOR142W NGL1Q08213 363 aaKnown RBP5.5□□□□□ -1.53
LSC1YOR142W YOL118CQ08259 102 aa5.5□□□□□ -1.53
LSC1YOR142W YOR283WQ12040 230 aaKnown RBP5.5□□□□□ -1.53
LSC1YOR142W DCP1Q12517 231 aaPredicted RBP5.5□□□□□ -1.53
LSC1YOR142W AAC1P04710 309 aa5.49□□□□□ -1.53
LSC1YOR142W RPL3P14126 387 aaKnown RBP5.49□□□□□ -1.53
LSC1YOR142W URA6P15700 204 aa5.49□□□□□ -1.53
LSC1YOR142W RFA3P26755 122 aaKnown RBP5.49□□□□□ -1.53
LSC1YOR142W ACH1P32316 526 aa5.49□□□□□ -1.53
LSC1YOR142W ERG3P32353 365 aa5.49□□□□□ -1.53
LSC1YOR142W MBA1P38300 278 aa5.49□□□□□ -1.53
LSC1YOR142W AIM46P38885 310 aa5.49□□□□□ -1.53
LSC1YOR142W CAT5P41735 233 aa5.49□□□□□ -1.53
LSC1YOR142W HNT2P49775 206 aa5.49□□□□□ -1.53
LSC1YOR142W SKP1P52286 194 aa5.49□□□□□ -1.53
LSC1YOR142W CWC23P52868 283 aaPredicted RBP5.49□□□□□ -1.53
LSC1YOR142W DUG3P53871 357 aa5.49□□□□□ -1.53
LSC1YOR142W RPL21AQ02753 160 aaKnown RBP5.49□□□□□ -1.53
LSC1YOR142W YDR415CQ04033 374 aaPredicted RBP5.49□□□□□ -1.53
LSC1YOR142W LIP2Q06005 328 aa5.49□□□□□ -1.53
LSC1YOR142W TMA10Q06177 86 aa5.49□□□□□ -1.53
LSC1YOR142W VAM3Q12241 283 aa5.49□□□□□ -1.53
LSC1YOR142W RPL21BQ12672 160 aaKnown RBP5.49□□□□□ -1.53
LSC1YOR142W ATG40Q99325 256 aa5.49□□□□□ -1.53
LSC1YOR142W TAL1P15019 335 aaKnown RBP5.48□□□□□ -1.53
LSC1YOR142W ATP10P18496 279 aa5.48□□□□□ -1.53
LSC1YOR142W ATG22P25568 528 aa5.48□□□□□ -1.53
LSC1YOR142W YCR101CP25607 182 aa5.48□□□□□ -1.53
LSC1YOR142W OCH1P31755 480 aa5.48□□□□□ -1.53
LSC1YOR142W YHR122WP38829 231 aa5.48□□□□□ -1.53
LSC1YOR142W MIT1P40002 666 aa5.48□□□□□ -1.53
LSC1YOR142W PIC2P40035 300 aa5.48□□□□□ -1.53
LSC1YOR142W RAI1P53063 387 aaKnown RBP5.48□□□□□ -1.53
LSC1YOR142W YGR054WP53235 642 aaKnown RBP5.48□□□□□ -1.53
LSC1YOR142W OKP1P53298 406 aa5.48□□□□□ -1.53
LSC1YOR142W HSK3P69852 69 aa5.48□□□□□ -1.53
LSC1YOR142W MSA1Q08471 629 aa5.48□□□□□ -1.53
LSC1YOR142W ALG6Q12001 544 aaKnown RBP5.48□□□□□ -1.53
LSC1YOR142W WHI5Q12416 295 aa5.48□□□□□ -1.53
LSC1YOR142W GDH1P07262 454 aaKnown RBP5.47□□□□□ -1.53
LSC1YOR142W PUP1P25043 261 aa5.47□□□□□ -1.53
LSC1YOR142W BUD23P25627 275 aaPredicted RBP5.47□□□□□ -1.53
LSC1YOR142W SWD2P36104 329 aaPredicted RBP5.47□□□□□ -1.53
LSC1YOR142W ADH5P38113 351 aaKnown RBP5.47□□□□□ -1.53
LSC1YOR142W HPA3P39979 161 aa5.47□□□□□ -1.53
LSC1YOR142W SER2P42941 309 aa5.47□□□□□ -1.53
LSC1YOR142W IRC18P47056 224 aa5.47□□□□□ -1.53
LSC1YOR142W YGL114WP53134 725 aa5.47□□□□□ -1.53
LSC1YOR142W FIT1Q04433 528 aa5.47□□□□□ -1.53
LSC1YOR142W RPN13O13563 156 aa5.46□□□□□ -1.54
LSC1YOR142W IFM1P25038 676 aa5.46□□□□□ -1.54
LSC1YOR142W RNP1P32385 249 aa5.46□□□□□ -1.54
LSC1YOR142W RPB7P34087 171 aa5.46□□□□□ -1.54
LSC1YOR142W UTP11P34247 250 aaPredicted RBP5.46□□□□□ -1.54
LSC1YOR142W SOR1P35497 357 aaKnown RBP5.46□□□□□ -1.54
LSC1YOR142W NTC20P38302 140 aaPredicted RBP5.46□□□□□ -1.54
LSC1YOR142W ECM18Q04623 453 aa5.46□□□□□ -1.54
LSC1YOR142W ADH6Q04894 360 aaKnown RBP5.46□□□□□ -1.54
LSC1YOR142W SOR2Q07786 357 aa5.46□□□□□ -1.54
LSC1YOR142W YLR031WQ07978 186 aa5.46□□□□□ -1.54
LSC1YOR142W RPL5P26321 297 aaKnown RBP5.45□□□□□ -1.54
LSC1YOR142W MSS1P32559 526 aaPredicted RBP5.45□□□□□ -1.54
LSC1YOR142W ISC10P32645 267 aa5.45□□□□□ -1.54
LSC1YOR142W FMT1P32785 401 aa5.45□□□□□ -1.54
LSC1YOR142W CPR5P35176 225 aa5.45□□□□□ -1.54
LSC1YOR142W IPI1P38803 334 aaPredicted RBP5.45□□□□□ -1.54
LSC1YOR142W FCY21P40039 528 aa5.45□□□□□ -1.54
LSC1YOR142W DIE2P50076 525 aa5.45□□□□□ -1.54
LSC1YOR142W SRL4Q03085 281 aa5.45□□□□□ -1.54
LSC1YOR142W YMR166CQ03829 368 aa5.45□□□□□ -1.54
LSC1YOR142W RGC1Q06108 1083 aaKnown RBP5.45□□□□□ -1.54
LSC1YOR142W ARR2Q06597 130 aa5.45□□□□□ -1.54
LSC1YOR142W SOG2Q08817 791 aa5.45□□□□□ -1.54
LSC1YOR142W BBP1Q12365 385 aa5.45□□□□□ -1.54
LSC1YOR142W URA3P03962 267 aa5.44□□□□□ -1.54
LSC1YOR142W SEN2P16658 377 aa5.44□□□□□ -1.54
LSC1YOR142W SPT14P32363 452 aa5.44□□□□□ -1.54
LSC1YOR142W RIB7P33312 244 aa5.44□□□□□ -1.54
LSC1YOR142W MRPL27P36526 146 aaPredicted RBP5.44□□□□□ -1.54
LSC1YOR142W YBR197CP38306 217 aa5.44□□□□□ -1.54
LSC1YOR142W CUE1P38428 203 aa5.44□□□□□ -1.54
LSC1YOR142W PAC2P39937 518 aa5.44□□□□□ -1.54
LSC1YOR142W YJR011CP47086 261 aaPredicted RBP5.44□□□□□ -1.54
LSC1YOR142W TTI2P47168 421 aa5.44□□□□□ -1.54
LSC1YOR142W SOL1P50278 321 aa5.44□□□□□ -1.54
LSC1YOR142W YGR045CP53229 120 aa5.44□□□□□ -1.54
LSC1YOR142W SLX9P53251 210 aaPredicted RBP5.44□□□□□ -1.54
LSC1YOR142W TY1A-MR1Q04215 440 aa5.44□□□□□ -1.54
LSC1YOR142W NOC4Q06512 552 aaPredicted RBP5.44□□□□□ -1.54
LSC1YOR142W TFC7Q12415 435 aa5.44□□□□□ -1.54
LSC1YOR142W CYC1P00044 109 aaPredicted RBP5.43□□□□□ -1.54
LSC1YOR142W TCA17P32613 152 aa5.43□□□□□ -1.54
LSC1YOR142W CBT1P36038 271 aaPredicted RBP5.43□□□□□ -1.54
LSC1YOR142W RPS0BP46654 252 aaKnown RBP5.43□□□□□ -1.54
LSC1YOR142W CWC25P53854 179 aaKnown RBP5.43□□□□□ -1.54
LSC1YOR142W YNL234WP53857 426 aa5.43□□□□□ -1.54
LSC1YOR142W YPL108WQ02872 168 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms