RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W RPS1AP33442 255 aaKnown RBP3.11□□□□□ -1.91
LCB5YLR260W LSM12P38828 187 aaKnown RBP3.11□□□□□ -1.91
LCB5YLR260W PTI1P39927 425 aaPredicted RBP3.11□□□□□ -1.91
LCB5YLR260W IRC18P47056 224 aa3.11□□□□□ -1.91
LCB5YLR260W CCC1P47818 322 aa3.11□□□□□ -1.91
LCB5YLR260W ASI3P53983 676 aa3.11□□□□□ -1.91
LCB5YLR260W SUR7P54003 302 aa3.11□□□□□ -1.91
LCB5YLR260W LSM3P57743 89 aaKnown RBP3.11□□□□□ -1.91
LCB5YLR260W TPS1Q00764 495 aaKnown RBP3.11□□□□□ -1.91
LCB5YLR260W GAT3Q07928 141 aa3.11□□□□□ -1.91
LCB5YLR260W YDL009CQ12210 107 aa3.11□□□□□ -1.91
LCB5YLR260W YPR064WQ12492 139 aa3.11□□□□□ -1.91
LCB5YLR260W IPP1P00817 287 aaKnown RBP3.1□□□□□ -1.91
LCB5YLR260W TPI1P00942 248 aaKnown RBP3.1□□□□□ -1.91
LCB5YLR260W REP1P03871 373 aa3.1□□□□□ -1.91
LCB5YLR260W ALG7P07286 448 aa3.1□□□□□ -1.91
LCB5YLR260W EXO70P19658 623 aa3.1□□□□□ -1.91
LCB5YLR260W PHO80P20052 293 aa3.1□□□□□ -1.91
LCB5YLR260W MRPS28P21771 286 aa3.1□□□□□ -1.91
LCB5YLR260W YKR041WP36134 250 aa3.1□□□□□ -1.91
LCB5YLR260W YBR096WP38256 230 aa3.1□□□□□ -1.91
LCB5YLR260W YER076CP40049 302 aa3.1□□□□□ -1.91
LCB5YLR260W SIM1P40472 476 aa3.1□□□□□ -1.91
LCB5YLR260W MEP2P41948 499 aa3.1□□□□□ -1.91
LCB5YLR260W PMT6P42934 759 aa3.1□□□□□ -1.91
LCB5YLR260W FMP32P43557 207 aa3.1□□□□□ -1.91
LCB5YLR260W ILM1P47155 203 aa3.1□□□□□ -1.91
LCB5YLR260W BRR6P53062 197 aa3.1□□□□□ -1.91
LCB5YLR260W YLR152CP54072 576 aa3.1□□□□□ -1.91
LCB5YLR260W MET31Q03081 177 aa3.1□□□□□ -1.91
LCB5YLR260W SWF1Q04629 336 aa3.1□□□□□ -1.91
LCB5YLR260W YMR315WQ04869 349 aaKnown RBP3.1□□□□□ -1.91
LCB5YLR260W NEJ1Q06148 342 aa3.1□□□□□ -1.91
LCB5YLR260W SAL1D6W196 494 aa3.1□□□□□ -1.91
LCB5YLR260W RPL43AP0CX25 92 aaKnown RBP3.1□□□□□ -1.91
LCB5YLR260W RPL43BP0CX26 92 aa3.1□□□□□ -1.91
LCB5YLR260W NHP6AP11632 93 aaKnown RBP3.1□□□□□ -1.91
LCB5YLR260W ERG4P25340 473 aa3.1□□□□□ -1.91
LCB5YLR260W CAT2P32796 670 aaKnown RBP3.1□□□□□ -1.91
LCB5YLR260W JEN1P36035 616 aa3.1□□□□□ -1.91
LCB5YLR260W SCO2P38072 301 aa3.1□□□□□ -1.91
LCB5YLR260W VPS52P39904 641 aa3.1□□□□□ -1.91
LCB5YLR260W OXA1P39952 402 aa3.1□□□□□ -1.91
LCB5YLR260W YIA6P40556 373 aa3.1□□□□□ -1.91
LCB5YLR260W MRM2P53123 320 aa3.1□□□□□ -1.91
LCB5YLR260W COG5P53951 403 aa3.1□□□□□ -1.91
LCB5YLR260W SPR6Q01684 191 aa3.1□□□□□ -1.91
LCB5YLR260W YMR166CQ03829 368 aa3.1□□□□□ -1.91
LCB5YLR260W TVP15Q03860 143 aa3.1□□□□□ -1.91
LCB5YLR260W SRL2Q12020 392 aa3.1□□□□□ -1.91
LCB5YLR260W SME1Q12330 94 aaPredicted RBP3.1□□□□□ -1.91
LCB5YLR260W YLR361C-AQ3E795 98 aa3.1□□□□□ -1.91
LCB5YLR260W TFS1P14306 219 aa3.09□□□□□ -1.91
LCB5YLR260W RPS2P25443 254 aaKnown RBP3.09□□□□□ -1.91
LCB5YLR260W BUB2P26448 306 aaPredicted RBP3.09□□□□□ -1.91
LCB5YLR260W RPL16BP26785 198 aaKnown RBP3.09□□□□□ -1.91
LCB5YLR260W PTC1P35182 281 aa3.09□□□□□ -1.91
LCB5YLR260W ANR2P36090 516 aaPredicted RBP3.09□□□□□ -1.91
LCB5YLR260W HEK2P38199 381 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
LCB5YLR260W YFL015CP43578 164 aa3.09□□□□□ -1.91
LCB5YLR260W OST3P48439 350 aa3.09□□□□□ -1.91
LCB5YLR260W COS6P53344 381 aa3.09□□□□□ -1.91
LCB5YLR260W RHO4Q00246 291 aa3.09□□□□□ -1.91
LCB5YLR260W SNX41Q04053 625 aa3.09□□□□□ -1.91
LCB5YLR260W MRX9Q07349 420 aaKnown RBP3.09□□□□□ -1.91
LCB5YLR260W YLR031WQ07978 186 aa3.09□□□□□ -1.91
LCB5YLR260W YOL024WQ08172 172 aa3.09□□□□□ -1.91
LCB5YLR260W YOR283WQ12040 230 aaKnown RBP3.09□□□□□ -1.91
LCB5YLR260W BBP1Q12365 385 aa3.09□□□□□ -1.91
LCB5YLR260W SNU23Q12368 194 aaPredicted RBP3.09□□□□□ -1.91
LCB5YLR260W NCA2Q12374 616 aa3.09□□□□□ -1.91
LCB5YLR260W RDI1Q12434 202 aa3.09□□□□□ -1.91
LCB5YLR260W YKL018C-AQ3E7A7 99 aa3.09□□□□□ -1.91
LCB5YLR260W MET2P08465 486 aa3.08□□□□□ -1.92
LCB5YLR260W YOL163WP0CF20 169 aa3.08□□□□□ -1.92
LCB5YLR260W PET9P18239 318 aaKnown RBP3.08□□□□□ -1.92
LCB5YLR260W IDP1P21954 428 aaKnown RBP3.08□□□□□ -1.92
LCB5YLR260W TFC1P32367 649 aa3.08□□□□□ -1.92
LCB5YLR260W YPC1P38298 316 aa3.08□□□□□ -1.92
LCB5YLR260W FCY21P40039 528 aa3.08□□□□□ -1.92
LCB5YLR260W STB1P42845 420 aa3.08□□□□□ -1.92
LCB5YLR260W SNO3P43544 222 aa3.08□□□□□ -1.92
LCB5YLR260W WWM1P43582 211 aaKnown RBP3.08□□□□□ -1.92
LCB5YLR260W YIP1P53039 248 aa3.08□□□□□ -1.92
LCB5YLR260W POP6P53218 158 aa3.08□□□□□ -1.92
LCB5YLR260W SLM2P53955 656 aa3.08□□□□□ -1.92
LCB5YLR260W YDR124WQ04608 324 aa3.08□□□□□ -1.92
LCB5YLR260W FAR10Q06001 478 aa3.08□□□□□ -1.92
LCB5YLR260W GAS2Q06135 555 aa3.08□□□□□ -1.92
LCB5YLR260W TAZ1Q06510 381 aa3.08□□□□□ -1.92
LCB5YLR260W YPR091CQ06833 770 aa3.08□□□□□ -1.92
LCB5YLR260W TPO4Q12256 659 aa3.08□□□□□ -1.92
LCB5YLR260W MEC1P38111 2368 aa3.08□□□□□ -1.92
LCB5YLR260W GRX2P17695 143 aaKnown RBP3.08□□□□□ -1.92
LCB5YLR260W IFM1P25038 676 aa3.08□□□□□ -1.92
LCB5YLR260W SPT4P32914 102 aaPredicted RBP3.08□□□□□ -1.92
LCB5YLR260W YKL075CP36083 450 aa3.08□□□□□ -1.92
LCB5YLR260W GPX2P38143 162 aa3.08□□□□□ -1.92
LCB5YLR260W SDS24P38314 527 aa3.08□□□□□ -1.92
LCB5YLR260W LAG1P38703 411 aa3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 81.2 ms