RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W GMH1P36125 273 aa4.15□□□□□ -1.75
ABF1YKL112W MET30P39014 640 aa4.15□□□□□ -1.75
ABF1YKL112W YFL064CP43540 174 aa4.15□□□□□ -1.75
ABF1YKL112W BRR6P53062 197 aa4.15□□□□□ -1.75
ABF1YKL112W BUD32P53323 261 aa4.15□□□□□ -1.75
ABF1YKL112W RSM10Q03201 203 aa4.15□□□□□ -1.75
ABF1YKL112W MAK3Q03503 176 aa4.15□□□□□ -1.75
ABF1YKL112W TY1A-DR2Q03964 440 aaKnown RBP4.15□□□□□ -1.75
ABF1YKL112W RNH202Q05635 350 aa4.15□□□□□ -1.75
ABF1YKL112W ARC18Q05933 178 aaKnown RBP4.15□□□□□ -1.75
ABF1YKL112W CNL1Q06333 122 aa4.15□□□□□ -1.75
ABF1YKL112W YOL073CQ08232 322 aa4.15□□□□□ -1.75
ABF1YKL112W ACM1Q08981 209 aa4.15□□□□□ -1.75
ABF1YKL112W YPR202WQ08993 238 aa4.15□□□□□ -1.75
ABF1YKL112W SPC3Q12133 184 aa4.15□□□□□ -1.75
ABF1YKL112W YCT1Q12235 531 aa4.15□□□□□ -1.75
ABF1YKL112W TY1A-DR4O74302 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-HP0C2I4 478 aaKnown RBP4.14□□□□□ -1.75
ABF1YKL112W TY1A-LR4P0C2I8 440 aaKnown RBP4.14□□□□□ -1.75
ABF1YKL112W TY1A-AP0CX57 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-PR1P0CX58 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-ORP0CX59 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-PR2P0CX60 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-DR5P0CX65 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-ER2P0CX66 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-GR3P0CX67 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-LR1P0CX68 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-MR2P0CX69 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-DR6P0CX70 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-ER1P0CX71 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-LR2P0CX72 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-PLP0CX73 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-JR1P0CX74 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-LR3P0CX75 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-ML2P0CX76 440 aa4.14□□□□□ -1.75
ABF1YKL112W TAH1P25638 111 aaPredicted RBP4.14□□□□□ -1.75
ABF1YKL112W YMR144WP40214 342 aaKnown RBP4.14□□□□□ -1.75
ABF1YKL112W UBX6P47049 396 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-JR2P47099 440 aa4.14□□□□□ -1.75
ABF1YKL112W COQ5P49017 307 aa4.14□□□□□ -1.75
ABF1YKL112W TDA1Q03533 586 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-DR1Q03856 440 aa4.14□□□□□ -1.75
ABF1YKL112W RAV2Q03956 351 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-ML1Q04706 440 aaKnown RBP4.14□□□□□ -1.75
ABF1YKL112W YMR034CQ05131 434 aaPredicted RBP4.14□□□□□ -1.75
ABF1YKL112W TY1A-GR1Q12085 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-NL1Q12391 440 aaKnown RBP4.14□□□□□ -1.75
ABF1YKL112W TY1A-NL2Q12470 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-GR2Q12485 440 aa4.14□□□□□ -1.75
ABF1YKL112W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.14□□□□□ -1.75
ABF1YKL112W TY1A-OLQ92392 440 aaKnown RBP4.14□□□□□ -1.75
ABF1YKL112W RPN13O13563 156 aa4.14□□□□□ -1.75
ABF1YKL112W PPH21P23594 369 aa4.14□□□□□ -1.75
ABF1YKL112W TRS65P32893 560 aa4.14□□□□□ -1.75
ABF1YKL112W SFC1P33303 322 aa4.14□□□□□ -1.75
ABF1YKL112W SHE2P36068 246 aaKnown RBP RIP-Chip data4.14□□□□□ -1.75not detected
ABF1YKL112W LYS1P38998 373 aaRIP-Chip data4.14□□□□□ -1.75not detected
ABF1YKL112W GLE2P40066 365 aa4.14□□□□□ -1.75
ABF1YKL112W YGR168CP53293 376 aa4.14□□□□□ -1.75
ABF1YKL112W HSK3P69852 69 aa4.14□□□□□ -1.75
ABF1YKL112W RSC9Q03124 581 aa4.14□□□□□ -1.75
ABF1YKL112W AHA1Q12449 350 aaKnown RBP4.14□□□□□ -1.75
ABF1YKL112W CDC4P07834 779 aa4.13□□□□□ -1.75
ABF1YKL112W SGA1P08019 549 aa4.13□□□□□ -1.75
ABF1YKL112W YFL068WP0CX99 160 aa4.13□□□□□ -1.75
ABF1YKL112W YLL066W-AP0CY00 160 aa4.13□□□□□ -1.75
ABF1YKL112W YLL067W-AP0CY01 160 aa4.13□□□□□ -1.75
ABF1YKL112W SPT15P13393 240 aaKnown RBP4.13□□□□□ -1.75
ABF1YKL112W SAT4P25333 603 aaKnown RBP4.13□□□□□ -1.75
ABF1YKL112W ETR1P38071 380 aa4.13□□□□□ -1.75
ABF1YKL112W AVT2P39981 480 aa4.13□□□□□ -1.75
ABF1YKL112W NUP57P48837 541 aa4.13□□□□□ -1.75
ABF1YKL112W YDR366CP87287 132 aa4.13□□□□□ -1.75
ABF1YKL112W YET2Q04210 160 aa4.13□□□□□ -1.75
ABF1YKL112W MRX8Q05473 314 aa4.13□□□□□ -1.75
ABF1YKL112W POS5Q06892 414 aa4.13□□□□□ -1.75
ABF1YKL112W THI21Q08975 551 aa4.13□□□□□ -1.75
ABF1YKL112W YDL007C-AQ2V2Q0 85 aa4.13□□□□□ -1.75
ABF1YKL112W YOR338WQ99326 363 aa4.13□□□□□ -1.75
ABF1YKL112W UBR1P19812 1950 aa4.13□□□□□ -1.75
ABF1YKL112W ALG7P07286 448 aa4.13□□□□□ -1.75
ABF1YKL112W UBI4P0CG63 381 aaKnown RBP4.13□□□□□ -1.75
ABF1YKL112W SRB6P32570 121 aa4.13□□□□□ -1.75
ABF1YKL112W MOH1P38191 138 aa4.13□□□□□ -1.75
ABF1YKL112W YER189WP40104 122 aa4.13□□□□□ -1.75
ABF1YKL112W TIF34P40217 347 aaKnown RBP4.13□□□□□ -1.75
ABF1YKL112W IRC18P47056 224 aa4.13□□□□□ -1.75
ABF1YKL112W SUN4P53616 420 aa4.13□□□□□ -1.75
ABF1YKL112W SWS2P53937 143 aa4.13□□□□□ -1.75
ABF1YKL112W CDC14Q00684 551 aa4.13□□□□□ -1.75
ABF1YKL112W ENB1Q08299 606 aa4.13□□□□□ -1.75
ABF1YKL112W RAD28Q12021 506 aa4.13□□□□□ -1.75
ABF1YKL112W FRE7Q12333 620 aa4.13□□□□□ -1.75
ABF1YKL112W YOL163WP0CF20 169 aa4.12□□□□□ -1.75
ABF1YKL112W ATR1P13090 542 aa4.12□□□□□ -1.75
ABF1YKL112W MTC7P32633 139 aa4.12□□□□□ -1.75
ABF1YKL112W MIT1P40002 666 aa4.12□□□□□ -1.75
ABF1YKL112W GCV1P48015 400 aa4.12□□□□□ -1.75
ABF1YKL112W YIP4P53093 235 aa4.12□□□□□ -1.75
ABF1YKL112W MTM1P53320 366 aa4.12□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms