RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W YCL021W-AQ96VH3 125 aa3.56□□□□□ -1.84
TFA1YKL028W RPL25P04456 142 aaKnown RBP3.55□□□□□ -1.84
TFA1YKL028W SEC14P24280 304 aaKnown RBP3.55□□□□□ -1.84
TFA1YKL028W EDC2P40023 145 aaPredicted RBP3.55□□□□□ -1.84
TFA1YKL028W XBP1P40489 647 aa3.55□□□□□ -1.84
TFA1YKL028W CAT5P41735 233 aa3.55□□□□□ -1.84
TFA1YKL028W UFE1P41834 346 aa3.55□□□□□ -1.84
TFA1YKL028W COQ5P49017 307 aa3.55□□□□□ -1.84
TFA1YKL028W HST4P53688 370 aa3.55□□□□□ -1.84
TFA1YKL028W SWP1Q02795 286 aa3.55□□□□□ -1.84
TFA1YKL028W HPT1Q04178 221 aaKnown RBP3.55□□□□□ -1.84
TFA1YKL028W YMR317WQ04893 1140 aa3.55□□□□□ -1.84
TFA1YKL028W YOL160WQ08321 113 aa3.55□□□□□ -1.84
TFA1YKL028W BBP1Q12365 385 aa3.55□□□□□ -1.84
TFA1YKL028W YER078W-AQ3E7A2 54 aa3.55□□□□□ -1.84
TFA1YKL028W TAF2P23255 1407 aa3.55□□□□□ -1.84
TFA1YKL028W SCO1P23833 295 aa3.54□□□□□ -1.84
TFA1YKL028W ERG2P32352 222 aa3.54□□□□□ -1.84
TFA1YKL028W ERG24P32462 438 aaKnown RBP3.54□□□□□ -1.84
TFA1YKL028W PTM1P32857 523 aa3.54□□□□□ -1.84
TFA1YKL028W SLM6P38343 150 aa3.54□□□□□ -1.84
TFA1YKL028W SSH1P38353 490 aaKnown RBP3.54□□□□□ -1.84
TFA1YKL028W DOG2P38773 246 aa3.54□□□□□ -1.84
TFA1YKL028W DID2P69771 204 aa3.54□□□□□ -1.84
TFA1YKL028W PKR1Q03880 122 aaKnown RBP3.54□□□□□ -1.84
TFA1YKL028W NDD1Q08887 554 aa3.54□□□□□ -1.84
TFA1YKL028W YPL257WQ08974 193 aa3.54□□□□□ -1.84
TFA1YKL028W YHR214C-EQ8TGK0 99 aa3.54□□□□□ -1.84
TFA1YKL028W YOR1P53049 1477 aa3.54□□□□□ -1.84
TFA1YKL028W CDC7P06243 507 aa3.53□□□□□ -1.84
TFA1YKL028W SIR2P06700 562 aa3.53□□□□□ -1.84
TFA1YKL028W EPT1P22140 391 aa3.53□□□□□ -1.84
TFA1YKL028W CSG2P35206 410 aa3.53□□□□□ -1.84
TFA1YKL028W PTH1P38876 190 aaKnown RBP3.53□□□□□ -1.84
TFA1YKL028W BAT1P38891 393 aaKnown RBP3.53□□□□□ -1.84
TFA1YKL028W HMF1P40037 129 aaKnown RBP3.53□□□□□ -1.84
TFA1YKL028W GLE2P40066 365 aa3.53□□□□□ -1.84
TFA1YKL028W AVT6P40074 448 aa3.53□□□□□ -1.84
TFA1YKL028W YGR050CP53231 118 aa3.53□□□□□ -1.84
TFA1YKL028W RMI1Q02685 241 aa3.53□□□□□ -1.84
TFA1YKL028W MRX11Q03079 207 aa3.53□□□□□ -1.84
TFA1YKL028W PBA1Q05778 276 aa3.53□□□□□ -1.84
TFA1YKL028W SUE1Q06524 206 aa3.53□□□□□ -1.84
TFA1YKL028W IRC25Q07951 179 aa3.53□□□□□ -1.84
TFA1YKL028W CCH1P50077 2039 aa3.53□□□□□ -1.84
TFA1YKL028W SWI1P09547 1314 aa3.53□□□□□ -1.84
TFA1YKL028W IPP1P00817 287 aaKnown RBP3.53□□□□□ -1.85
TFA1YKL028W MAG1P22134 296 aaKnown RBP3.53□□□□□ -1.85
TFA1YKL028W SMP1P38128 452 aa3.53□□□□□ -1.85
TFA1YKL028W YHL044WP38727 235 aa3.53□□□□□ -1.85
TFA1YKL028W IPI1P38803 334 aaPredicted RBP3.53□□□□□ -1.85
TFA1YKL028W GGC1P38988 300 aa3.53□□□□□ -1.85
TFA1YKL028W TIM17P39515 158 aa3.53□□□□□ -1.85
TFA1YKL028W RMD6P39975 231 aa3.53□□□□□ -1.85
TFA1YKL028W YER189WP40104 122 aa3.53□□□□□ -1.85
TFA1YKL028W RRG9P40156 214 aa3.53□□□□□ -1.85
TFA1YKL028W YGR201CP42936 225 aa3.53□□□□□ -1.85
TFA1YKL028W IMP4P53941 290 aaKnown RBP3.53□□□□□ -1.85
TFA1YKL028W YDR476CQ03362 224 aa3.53□□□□□ -1.85
TFA1YKL028W INP1Q03694 420 aa3.53□□□□□ -1.85
TFA1YKL028W SHH4Q06236 168 aa3.53□□□□□ -1.85
TFA1YKL028W RFU1Q08003 200 aa3.53□□□□□ -1.85
TFA1YKL028W YOL019WQ08157 551 aa3.53□□□□□ -1.85
TFA1YKL028W YLR046CQ12253 270 aa3.53□□□□□ -1.85
TFA1YKL028W FCY2P17064 533 aa3.52□□□□□ -1.85
TFA1YKL028W AAT2P23542 418 aaKnown RBP3.52□□□□□ -1.85
TFA1YKL028W CNB1P25296 175 aa3.52□□□□□ -1.85
TFA1YKL028W REE1P40893 198 aa3.52□□□□□ -1.85
TFA1YKL028W YJR111CP47148 283 aaKnown RBP3.52□□□□□ -1.85
TFA1YKL028W YGL262WP53054 175 aa3.52□□□□□ -1.85
TFA1YKL028W RCF2P53721 224 aa3.52□□□□□ -1.85
TFA1YKL028W SWT21P53873 357 aaPredicted RBP3.52□□□□□ -1.85
TFA1YKL028W YNL010WP53981 241 aaKnown RBP3.52□□□□□ -1.85
TFA1YKL028W RPL21AQ02753 160 aaKnown RBP3.52□□□□□ -1.85
TFA1YKL028W CSN9Q03981 162 aa3.52□□□□□ -1.85
TFA1YKL028W GPI17Q04080 534 aa3.52□□□□□ -1.85
TFA1YKL028W YDR115WQ04598 105 aa3.52□□□□□ -1.85
TFA1YKL028W PAL1Q05518 499 aaKnown RBP3.52□□□□□ -1.85
TFA1YKL028W YPR011CQ12251 326 aa3.52□□□□□ -1.85
TFA1YKL028W YPS3Q12303 508 aa3.52□□□□□ -1.85
TFA1YKL028W NHP6AP11632 93 aaKnown RBP3.51□□□□□ -1.85
TFA1YKL028W ATG22P25568 528 aa3.51□□□□□ -1.85
TFA1YKL028W RBL2P48606 106 aaKnown RBP3.51□□□□□ -1.85
TFA1YKL028W SCW4P53334 386 aaKnown RBP3.51□□□□□ -1.85
TFA1YKL028W TMA20P89886 181 aaPredicted RBP3.51□□□□□ -1.85
TFA1YKL028W ELP3Q02908 557 aaKnown RBP3.51□□□□□ -1.85
TFA1YKL028W TIM22Q12328 207 aa3.51□□□□□ -1.85
TFA1YKL028W YLR361C-AQ3E795 98 aa3.51□□□□□ -1.85
TFA1YKL028W MBF1O14467 151 aaKnown RBP3.5□□□□□ -1.85
TFA1YKL028W YKL102CP34249 101 aa3.5□□□□□ -1.85
TFA1YKL028W TVP38P36164 337 aa3.5□□□□□ -1.85
TFA1YKL028W OM14P38325 134 aa3.5□□□□□ -1.85
TFA1YKL028W TRR2P38816 342 aa3.5□□□□□ -1.85
TFA1YKL028W RPE1P46969 238 aa3.5□□□□□ -1.85
TFA1YKL028W ACT1P60010 375 aaKnown RBP3.5□□□□□ -1.85
TFA1YKL028W DYN2Q02647 92 aa3.5□□□□□ -1.85
TFA1YKL028W RAV2Q03956 351 aa3.5□□□□□ -1.85
TFA1YKL028W YMR244WQ04018 355 aa3.5□□□□□ -1.85
TFA1YKL028W EMI1Q04406 187 aa3.5□□□□□ -1.85
TFA1YKL028W API2Q04413 109 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms