RNA–Protein interactions for RNA: YIL132C

CSM2, Transcript of Component of Shu complex (aka PCSS complex), yeast

Gene CSM2, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSM2	YIL132C	CDC7	P06243	507 aa		3.5	□□□□□ -1.85
CSM2	YIL132C	MATALPHA1	P0CY06	175 aa		3.5	□□□□□ -1.85
CSM2	YIL132C	HMLALPHA1	P0CY07	175 aa		3.5	□□□□□ -1.85
CSM2	YIL132C	NTF2	P33331	125 aa	Known RBP	3.5	□□□□□ -1.85
CSM2	YIL132C	MSN4	P33749	630 aa		3.5	□□□□□ -1.85
CSM2	YIL132C	TOS8	P53147	276 aa		3.5	□□□□□ -1.85
CSM2	YIL132C	ERV29	P53337	310 aa		3.5	□□□□□ -1.85
CSM2	YIL132C	USB1	Q12208	290 aa	Known RBP	3.5	□□□□□ -1.85
CSM2	YIL132C	TPO4	Q12256	659 aa		3.5	□□□□□ -1.85
CSM2	YIL132C	BCY1	P07278	416 aa	Known RBP	3.49	□□□□□ -1.85
CSM2	YIL132C	CDC10	P25342	322 aa	Known RBP	3.49	□□□□□ -1.85
CSM2	YIL132C	VPS21	P36017	210 aa	Known RBP	3.49	□□□□□ -1.85
CSM2	YIL132C	RPC17	P47076	161 aa		3.49	□□□□□ -1.85
CSM2	YIL132C	NSA1	P53136	463 aa	Predicted RBP	3.48	□□□□□ -1.85
CSM2	YIL132C	DDI2	P0CH63	225 aa		3.47	□□□□□ -1.85
CSM2	YIL132C	DDI3	P0CH64	225 aa		3.47	□□□□□ -1.85
CSM2	YIL132C	MDH2	P22133	377 aa		3.47	□□□□□ -1.85
CSM2	YIL132C	DSE2	P38844	325 aa		3.47	□□□□□ -1.85
CSM2	YIL132C	PRM10	P42946	383 aa		3.47	□□□□□ -1.85
CSM2	YIL132C	CDC8	P00572	216 aa		3.46	□□□□□ -1.86
CSM2	YIL132C	VTC1	P40046	129 aa	RIP-Chip data	3.46	□□□□□ -1.86	not detected
CSM2	YIL132C	LIA1	P47120	325 aa	Known RBP	3.46	□□□□□ -1.86
CSM2	YIL132C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.46	□□□□□ -1.86	not detected
CSM2	YIL132C	SPT3	P06844	337 aa		3.45	□□□□□ -1.86
CSM2	YIL132C	YML108W	Q03759	105 aa		3.45	□□□□□ -1.86
CSM2	YIL132C	YNR062C	P53748	327 aa		3.44	□□□□□ -1.86
CSM2	YIL132C	DID2	P69771	204 aa		3.44	□□□□□ -1.86
CSM2	YIL132C	YMD8	Q03697	442 aa		3.44	□□□□□ -1.86
CSM2	YIL132C	YER085C	P40058	173 aa		3.43	□□□□□ -1.86
CSM2	YIL132C	PRE6	P40303	254 aa	Known RBP	3.43	□□□□□ -1.86
CSM2	YIL132C	PSF1	Q12488	208 aa		3.43	□□□□□ -1.86
CSM2	YIL132C	YPR170W-B	P0C5R9	85 aa		3.42	□□□□□ -1.86
CSM2	YIL132C	PET9	P18239	318 aa	Known RBP	3.42	□□□□□ -1.86
CSM2	YIL132C	YNL010W	P53981	241 aa	Known RBP	3.42	□□□□□ -1.86
CSM2	YIL132C	DCN1	Q12395	269 aa		3.42	□□□□□ -1.86
CSM2	YIL132C	LSO2	Q3E772	92 aa	Known RBP	3.42	□□□□□ -1.86
CSM2	YIL132C	SVP26	P38869	228 aa		3.41	□□□□□ -1.86
CSM2	YIL132C	IRC22	P40006	225 aa		3.4	□□□□□ -1.87
CSM2	YIL132C	COX15	P40086	486 aa		3.4	□□□□□ -1.87
CSM2	YIL132C	AGE2	P40529	298 aa		3.4	□□□□□ -1.87
CSM2	YIL132C	TRM12	Q04235	462 aa		3.4	□□□□□ -1.87
CSM2	YIL132C	MEI4	P29467	408 aa		3.39	□□□□□ -1.87
CSM2	YIL132C	DOG2	P38773	246 aa		3.39	□□□□□ -1.87
CSM2	YIL132C	YER135C	P40082	130 aa		3.39	□□□□□ -1.87
CSM2	YIL132C	RPL33B	P41056	107 aa	Known RBP	3.39	□□□□□ -1.87
CSM2	YIL132C	URA6	P15700	204 aa		3.38	□□□□□ -1.87
CSM2	YIL132C	CDC123	Q05791	360 aa		3.38	□□□□□ -1.87
CSM2	YIL132C	RHO1	P06780	209 aa	Known RBP	3.37	□□□□□ -1.87
CSM2	YIL132C	VMA6	P32366	345 aa	Known RBP	3.37	□□□□□ -1.87
CSM2	YIL132C	SSO1	P32867	290 aa		3.37	□□□□□ -1.87
CSM2	YIL132C	SRY1	P36007	326 aa		3.37	□□□□□ -1.87
CSM2	YIL132C	MIC26	P50087	233 aa		3.37	□□□□□ -1.87
CSM2	YIL132C	FYV6	P53913	173 aa		3.37	□□□□□ -1.87
CSM2	YIL132C	BUD25	P85052	153 aa		3.37	□□□□□ -1.87
CSM2	YIL132C	LPP1	Q04396	274 aa		3.37	□□□□□ -1.87
CSM2	YIL132C	RPL24B	P24000	155 aa	Known RBP	3.36	□□□□□ -1.87
CSM2	YIL132C	AVT2	P39981	480 aa		3.36	□□□□□ -1.87
CSM2	YIL132C	REP2	P03872	296 aa		3.35	□□□□□ -1.87
CSM2	YIL132C	PGD1	P40356	397 aa		3.35	□□□□□ -1.87
CSM2	YIL132C	ICE2	P40499	491 aa		3.35	□□□□□ -1.87
CSM2	YIL132C	AIF1	P52923	378 aa		3.35	□□□□□ -1.87
CSM2	YIL132C	SPG3	Q04398	127 aa	Predicted RBP	3.35	□□□□□ -1.87
CSM2	YIL132C	THP2	O13539	261 aa	Known RBP	3.34	□□□□□ -1.87
CSM2	YIL132C	YOL162W	P0CF19	215 aa		3.34	□□□□□ -1.87
CSM2	YIL132C	ATG22	P25568	528 aa		3.34	□□□□□ -1.87
CSM2	YIL132C	URA8	P38627	578 aa	Predicted RBP	3.34	□□□□□ -1.87
CSM2	YIL132C	TIR3	P40552	269 aa		3.34	□□□□□ -1.87
CSM2	YIL132C	SML1	Q04964	104 aa		3.34	□□□□□ -1.87
CSM2	YIL132C	YMR31	P19955	123 aa		3.33	□□□□□ -1.88
CSM2	YIL132C	YBR219C	P38317	127 aa		3.33	□□□□□ -1.88
CSM2	YIL132C	MIC12	P38341	106 aa		3.33	□□□□□ -1.88
CSM2	YIL132C	DRS2	P39524	1355 aa		3.33	□□□□□ -1.88
CSM2	YIL132C	CDC28	P00546	298 aa	Known RBP	3.32	□□□□□ -1.88
CSM2	YIL132C	BRR6	P53062	197 aa		3.32	□□□□□ -1.88
CSM2	YIL132C	PPA2	P28239	310 aa		3.31	□□□□□ -1.88
CSM2	YIL132C	PRM8	P53174	237 aa		3.31	□□□□□ -1.88
CSM2	YIL132C	ALG13	P53178	202 aa		3.31	□□□□□ -1.88
CSM2	YIL132C	YKR045C	P36138	183 aa		3.3	□□□□□ -1.88
CSM2	YIL132C	POP4	P38336	279 aa		3.3	□□□□□ -1.88
CSM2	YIL132C	BOL2	P53082	120 aa		3.3	□□□□□ -1.88
CSM2	YIL132C	SNZ1	Q03148	297 aa		3.3	□□□□□ -1.88
CSM2	YIL132C	RPL27B	P0C2H7	136 aa	Known RBP	3.29	□□□□□ -1.88
CSM2	YIL132C	YLR156W	P0CE96	114 aa		3.29	□□□□□ -1.88
CSM2	YIL132C	YLR159W	P0CE97	114 aa		3.29	□□□□□ -1.88
CSM2	YIL132C	YLR161W	P0CE98	114 aa		3.29	□□□□□ -1.88
CSM2	YIL132C	RTR1	P40084	226 aa	Predicted RBP	3.29	□□□□□ -1.88
CSM2	YIL132C	YDR248C	Q03786	193 aa		3.29	□□□□□ -1.88
CSM2	YIL132C	BMH2	P34730	273 aa	Known RBP	3.28	□□□□□ -1.88
CSM2	YIL132C	MRPS28	P21771	286 aa		3.27	□□□□□ -1.89
CSM2	YIL132C	YNL217W	P40152	326 aa		3.27	□□□□□ -1.89
CSM2	YIL132C	YRB2	P40517	327 aa		3.27	□□□□□ -1.89
CSM2	YIL132C	OTU1	P43558	301 aa		3.27	□□□□□ -1.89
CSM2	YIL132C	FAR7	P43592	221 aa		3.27	□□□□□ -1.89
CSM2	YIL132C	BXI1	P48558	297 aa		3.27	□□□□□ -1.89
CSM2	YIL132C	TDA8	Q6B2U8	126 aa		3.27	□□□□□ -1.89
CSM2	YIL132C	SEY1	Q99287	776 aa		3.27	□□□□□ -1.89
CSM2	YIL132C	DBF2	P22204	572 aa		3.26	□□□□□ -1.89
CSM2	YIL132C	MRPL28	P36527	147 aa		3.26	□□□□□ -1.89
CSM2	YIL132C	RTC3	P38804	111 aa	Predicted RBP	3.26	□□□□□ -1.89
CSM2	YIL132C	NUP57	P48837	541 aa		3.26	□□□□□ -1.89

Retrieved 100 of 5,963 RNA–protein pairs in 66 ms