RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C BUL1P48524 976 aa6.6□□□□□ -1.35
SNP1YIL061C PHO23P50947 330 aa6.6□□□□□ -1.35
SNP1YIL061C YGL117WP53133 265 aa6.6□□□□□ -1.35
SNP1YIL061C ELA1P53861 379 aaPredicted RBP6.6□□□□□ -1.35
SNP1YIL061C EST3Q03096 181 aa6.6□□□□□ -1.35
SNP1YIL061C RCE1Q03530 315 aa6.6□□□□□ -1.35
SNP1YIL061C ERF2Q06551 359 aa6.6□□□□□ -1.35
SNP1YIL061C RRT7Q07829 113 aa6.6□□□□□ -1.35
SNP1YIL061C YOR186WQ08560 144 aa6.6□□□□□ -1.35
SNP1YIL061C YLR365WQ7LIF2 110 aa6.6□□□□□ -1.35
SNP1YIL061C YHR213W-AQ8TGT4 77 aa6.6□□□□□ -1.35
SNP1YIL061C YLL053CP0CD98 152 aa6.59□□□□□ -1.35
SNP1YIL061C ARO3P14843 370 aaKnown RBP6.59□□□□□ -1.35
SNP1YIL061C GLC7P32598 312 aaKnown RBP6.59□□□□□ -1.35
SNP1YIL061C VMA8P32610 256 aaKnown RBP6.59□□□□□ -1.35
SNP1YIL061C CBT1P36038 271 aaPredicted RBP6.59□□□□□ -1.35
SNP1YIL061C SWD2P36104 329 aaPredicted RBP6.59□□□□□ -1.35
SNP1YIL061C MOH1P38191 138 aa6.59□□□□□ -1.35
SNP1YIL061C YEL057CP39983 233 aa6.59□□□□□ -1.35
SNP1YIL061C YER084WP40057 128 aa6.59□□□□□ -1.35
SNP1YIL061C YER158CP40095 573 aa6.59□□□□□ -1.35
SNP1YIL061C XBP1P40489 647 aa6.59□□□□□ -1.35
SNP1YIL061C GPP1P41277 250 aaKnown RBP6.59□□□□□ -1.35
SNP1YIL061C OST1P41543 476 aaKnown RBP6.59□□□□□ -1.35
SNP1YIL061C ODC1Q03028 310 aa6.59□□□□□ -1.35
SNP1YIL061C CAC2Q04199 468 aa6.59□□□□□ -1.35
SNP1YIL061C BER1Q06688 274 aaKnown RBP6.59□□□□□ -1.35
SNP1YIL061C YOL024WQ08172 172 aa6.59□□□□□ -1.35
SNP1YIL061C RPL7AP05737 244 aaKnown RBP6.58□□□□□ -1.36
SNP1YIL061C SSA3P09435 649 aaKnown RBP6.58□□□□□ -1.36
SNP1YIL061C RPL40AP0CH08 128 aaKnown RBP6.58□□□□□ -1.36
SNP1YIL061C RPL40BP0CH09 128 aaKnown RBP6.58□□□□□ -1.36
SNP1YIL061C CKA1P15790 372 aa6.58□□□□□ -1.36
SNP1YIL061C RPB7P34087 171 aa6.58□□□□□ -1.36
SNP1YIL061C MCH2P36032 473 aa6.58□□□□□ -1.36
SNP1YIL061C YMR262WP38430 313 aa6.58□□□□□ -1.36
SNP1YIL061C GPI16P38875 610 aa6.58□□□□□ -1.36
SNP1YIL061C LNP1P38878 278 aa6.58□□□□□ -1.36
SNP1YIL061C RPS26AP39938 119 aaKnown RBP6.58□□□□□ -1.36
SNP1YIL061C RPS26BP39939 119 aaKnown RBP6.58□□□□□ -1.36
SNP1YIL061C YIL029CP40538 142 aa6.58□□□□□ -1.36
SNP1YIL061C IRC24P40580 263 aa6.58□□□□□ -1.36
SNP1YIL061C RPA34P47006 233 aaPredicted RBP6.58□□□□□ -1.36
SNP1YIL061C YIP5P53108 310 aa6.58□□□□□ -1.36
SNP1YIL061C YDR286CQ05530 114 aa6.58□□□□□ -1.36
SNP1YIL061C RAF1Q06891 181 aa6.58□□□□□ -1.36
SNP1YIL061C ISU2Q12056 156 aa6.58□□□□□ -1.36
SNP1YIL061C NCE102Q12207 173 aaRIP-Chip data6.58□□□□□ -1.36not detected
SNP1YIL061C RPL7BQ12213 244 aaKnown RBP6.58□□□□□ -1.36
SNP1YIL061C YLR146W-AQ2V2P1 62 aa6.58□□□□□ -1.36
SNP1YIL061C TRA1P38811 3744 aa6.57□□□□□ -1.36
SNP1YIL061C RPL25P04456 142 aaKnown RBP6.57□□□□□ -1.36
SNP1YIL061C UBI4P0CG63 381 aaKnown RBP6.57□□□□□ -1.36
SNP1YIL061C MSI1P13712 422 aa6.57□□□□□ -1.36
SNP1YIL061C OLE1P21147 510 aaKnown RBP6.57□□□□□ -1.36
SNP1YIL061C CNB1P25296 175 aa6.57□□□□□ -1.36
SNP1YIL061C PRS2P38620 318 aaKnown RBP6.57□□□□□ -1.36
SNP1YIL061C YEA6P39953 335 aa6.57□□□□□ -1.36
SNP1YIL061C YER079WP40052 210 aaKnown RBP6.57□□□□□ -1.36
SNP1YIL061C PRM5P40476 318 aa6.57□□□□□ -1.36
SNP1YIL061C AGX1P43567 385 aa6.57□□□□□ -1.36
SNP1YIL061C MRX5P47007 382 aa6.57□□□□□ -1.36
SNP1YIL061C SOL1P50278 321 aa6.57□□□□□ -1.36
SNP1YIL061C SLX9P53251 210 aaPredicted RBP6.57□□□□□ -1.36
SNP1YIL061C GPI15P53961 229 aa6.57□□□□□ -1.36
SNP1YIL061C VPS28Q02767 242 aa6.57□□□□□ -1.36
SNP1YIL061C ERP1Q05359 219 aaKnown RBP6.57□□□□□ -1.36
SNP1YIL061C YPR098CQ06089 161 aa6.57□□□□□ -1.36
SNP1YIL061C FRE8Q12209 686 aa6.57□□□□□ -1.36
SNP1YIL061C MPD1Q12404 318 aaKnown RBP6.57□□□□□ -1.36
SNP1YIL061C YPR108W-AQ3E7B3 70 aa6.57□□□□□ -1.36
SNP1YIL061C FLX1P40464 311 aa6.56□□□□□ -1.36
SNP1YIL061C SNN1P48232 102 aa6.56□□□□□ -1.36
SNP1YIL061C HNT2P49775 206 aa6.56□□□□□ -1.36
SNP1YIL061C MRPL22P53881 309 aa6.56□□□□□ -1.36
SNP1YIL061C PIN3Q06449 215 aa6.56□□□□□ -1.36
SNP1YIL061C RRS1Q08746 203 aaKnown RBP6.56□□□□□ -1.36
SNP1YIL061C FIT3Q08907 204 aa6.56□□□□□ -1.36
SNP1YIL061C GCN1P33892 2672 aaKnown RBP6.55□□□□□ -1.36
SNP1YIL061C MET3P08536 511 aa6.55□□□□□ -1.36
SNP1YIL061C ZRC1P20107 442 aa6.55□□□□□ -1.36
SNP1YIL061C LDS1P31379 325 aa6.55□□□□□ -1.36
SNP1YIL061C ERG2P32352 222 aa6.55□□□□□ -1.36
SNP1YIL061C ECM25P32525 599 aa6.55□□□□□ -1.36
SNP1YIL061C SRB6P32570 121 aa6.55□□□□□ -1.36
SNP1YIL061C YUH1P35127 236 aa6.55□□□□□ -1.36
SNP1YIL061C SWD3P38123 315 aa6.55□□□□□ -1.36
SNP1YIL061C PET100P38958 111 aa6.55□□□□□ -1.36
SNP1YIL061C PHB1P40961 287 aa6.55□□□□□ -1.36
SNP1YIL061C EGT2P42835 1041 aa6.55□□□□□ -1.36
SNP1YIL061C RPN14P53196 417 aa6.55□□□□□ -1.36
SNP1YIL061C YIF1P53845 314 aaKnown RBP6.55□□□□□ -1.36
SNP1YIL061C YMR254CQ04838 102 aa6.55□□□□□ -1.36
SNP1YIL061C YPL278CQ08990 100 aa6.55□□□□□ -1.36
SNP1YIL061C FCF2Q12035 217 aaPredicted RBP6.55□□□□□ -1.36
SNP1YIL061C MSL5Q12186 476 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
SNP1YIL061C VMA9Q3E7B6 73 aa6.55□□□□□ -1.36
SNP1YIL061C TDH1P00360 332 aaKnown RBP6.54□□□□□ -1.36
SNP1YIL061C HEM4P06174 275 aa6.54□□□□□ -1.36
SNP1YIL061C MNS1P32906 549 aa6.54□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms