RNA–Protein interactions for RNA: YHR109W

CTM1, Transcript of Cytochrome c lysine methyltransferase, yeast

Gene CTM1, Length 1,758 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTM1	YHR109W	CKA2	P19454	339 aa		2.69	□□□□□ -1.98
CTM1	YHR109W	ECM33	P38248	429 aa	Known RBP	2.69	□□□□□ -1.98
CTM1	YHR109W	SRP14	P38985	146 aa		2.69	□□□□□ -1.98
CTM1	YHR109W	PFS2	P42841	465 aa	Known RBP	2.69	□□□□□ -1.98
CTM1	YHR109W	YJR056C	P47115	236 aa		2.69	□□□□□ -1.98
CTM1	YHR109W	AIM25	P47140	327 aa		2.69	□□□□□ -1.98
CTM1	YHR109W	ILM1	P47155	203 aa		2.69	□□□□□ -1.98
CTM1	YHR109W	RTC4	P53850	401 aa		2.69	□□□□□ -1.98
CTM1	YHR109W	SMT3	Q12306	101 aa	Known RBP	2.69	□□□□□ -1.98
CTM1	YHR109W	HTL1	Q9URQ5	78 aa		2.69	□□□□□ -1.98
CTM1	YHR109W	RAD10	P06838	210 aa		2.69	□□□□□ -1.98
CTM1	YHR109W	DSF1	P0CX08	502 aa		2.69	□□□□□ -1.98
CTM1	YHR109W	YNR073C	P0CX09	502 aa		2.69	□□□□□ -1.98
CTM1	YHR109W	YOX1	P34161	385 aa		2.69	□□□□□ -1.98
CTM1	YHR109W	FAR7	P43592	221 aa		2.69	□□□□□ -1.98
CTM1	YHR109W	RSM27	P53305	110 aa		2.69	□□□□□ -1.98
CTM1	YHR109W	HST4	P53688	370 aa		2.69	□□□□□ -1.98
CTM1	YHR109W	INM2	Q05533	292 aa		2.69	□□□□□ -1.98
CTM1	YHR109W	NOC4	Q06512	552 aa	Predicted RBP	2.69	□□□□□ -1.98
CTM1	YHR109W	NIP7	Q08962	181 aa	Known RBP	2.69	□□□□□ -1.98
CTM1	YHR109W	YLR462W	O13556	202 aa		2.68	□□□□□ -1.98
CTM1	YHR109W	PUT1	P09368	476 aa		2.68	□□□□□ -1.98
CTM1	YHR109W	ZWF1	P11412	505 aa	Known RBP	2.68	□□□□□ -1.98
CTM1	YHR109W	BMH1	P29311	267 aa	Known RBP	2.68	□□□□□ -1.98
CTM1	YHR109W	RCN1	P36054	211 aa		2.68	□□□□□ -1.98
CTM1	YHR109W	MRPS9	P38120	278 aa		2.68	□□□□□ -1.98
CTM1	YHR109W	TRR2	P38816	342 aa		2.68	□□□□□ -1.98
CTM1	YHR109W	YEL075C	P39972	122 aa		2.68	□□□□□ -1.98
CTM1	YHR109W	MRPL49	P40858	161 aa	Predicted RBP	2.68	□□□□□ -1.98
CTM1	YHR109W	ECO1	P43605	281 aa		2.68	□□□□□ -1.98
CTM1	YHR109W	YFR045W	P43617	309 aa		2.68	□□□□□ -1.98
CTM1	YHR109W	GRX8	Q05926	109 aa		2.68	□□□□□ -1.98
CTM1	YHR109W	YPL257W	Q08974	193 aa		2.68	□□□□□ -1.98
CTM1	YHR109W	AGC1	Q12482	902 aa		2.68	□□□□□ -1.98
CTM1	YHR109W	MRS1	P07266	363 aa		2.67	□□□□□ -1.98
CTM1	YHR109W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
CTM1	YHR109W	FCY2	P17064	533 aa		2.67	□□□□□ -1.98
CTM1	YHR109W	PTM1	P32857	523 aa		2.67	□□□□□ -1.98
CTM1	YHR109W	YER121W	P40076	114 aa		2.67	□□□□□ -1.98
CTM1	YHR109W	NOT5	Q12514	560 aa	Predicted RBP	2.67	□□□□□ -1.98
CTM1	YHR109W	IGO2	Q9P305	131 aa		2.67	□□□□□ -1.98
CTM1	YHR109W	SEC4	P07560	215 aa	Known RBP	2.66	□□□□□ -1.98
CTM1	YHR109W	TAH1	P25638	111 aa	Predicted RBP	2.66	□□□□□ -1.98
CTM1	YHR109W	CAF4	P36130	643 aa		2.66	□□□□□ -1.98
CTM1	YHR109W	DOG2	P38773	246 aa		2.66	□□□□□ -1.98
CTM1	YHR109W	DOG1	P38774	246 aa		2.66	□□□□□ -1.98
CTM1	YHR109W	YJR141W	P47172	347 aa	Predicted RBP	2.66	□□□□□ -1.98
CTM1	YHR109W	GAS3	Q03655	524 aa		2.66	□□□□□ -1.98
CTM1	YHR109W	FCF1	Q05498	189 aa	Predicted RBP	2.66	□□□□□ -1.98
CTM1	YHR109W	MDM32	Q12171	622 aa		2.66	□□□□□ -1.98
CTM1	YHR109W	TDA8	Q6B2U8	126 aa		2.66	□□□□□ -1.98
CTM1	YHR109W	YPR170W-B	P0C5R9	85 aa		2.66	□□□□□ -1.98
CTM1	YHR109W	YPT52	P36018	234 aa	Known RBP	2.66	□□□□□ -1.98
CTM1	YHR109W	SHG1	P38337	142 aa		2.66	□□□□□ -1.98
CTM1	YHR109W	YKE4	P40544	346 aa		2.66	□□□□□ -1.98
CTM1	YHR109W	FLC3	P53121	802 aa		2.66	□□□□□ -1.98
CTM1	YHR109W	SSU72	P53538	206 aa	Predicted RBP	2.66	□□□□□ -1.98
CTM1	YHR109W	LSM7	P53905	115 aa	Known RBP	2.66	□□□□□ -1.98
CTM1	YHR109W	NRK1	P53915	240 aa		2.66	□□□□□ -1.98
CTM1	YHR109W	RSM10	Q03201	203 aa		2.66	□□□□□ -1.98
CTM1	YHR109W	GRH1	Q04410	372 aa	Known RBP	2.66	□□□□□ -1.98
CTM1	YHR109W	TRX3	P25372	127 aa		2.65	□□□□□ -1.99
CTM1	YHR109W	TKL2	P33315	681 aa		2.65	□□□□□ -1.99
CTM1	YHR109W	VPS51	P36116	164 aa		2.65	□□□□□ -1.99
CTM1	YHR109W	YGP1	P38616	354 aa	Known RBP	2.65	□□□□□ -1.99
CTM1	YHR109W	RPA43	P46669	326 aa		2.65	□□□□□ -1.99
CTM1	YHR109W	GON7	P46984	123 aa		2.65	□□□□□ -1.99
CTM1	YHR109W	PRM8	P53174	237 aa		2.65	□□□□□ -1.99
CTM1	YHR109W	YMD8	Q03697	442 aa		2.65	□□□□□ -1.99
CTM1	YHR109W	ARO80	Q04052	950 aa		2.65	□□□□□ -1.99
CTM1	YHR109W	SGA1	P08019	549 aa		2.64	□□□□□ -1.99
CTM1	YHR109W	YBR063C	P38083	404 aa		2.64	□□□□□ -1.99
CTM1	YHR109W	RPF1	P38805	295 aa	Known RBP	2.64	□□□□□ -1.99
CTM1	YHR109W	IRC22	P40006	225 aa		2.64	□□□□□ -1.99
CTM1	YHR109W	YLR460C	P54007	376 aa		2.64	□□□□□ -1.99
CTM1	YHR109W	BRX1	Q08235	291 aa	Known RBP	2.64	□□□□□ -1.99
CTM1	YHR109W	YOR020W-A	Q3E824	90 aa		2.64	□□□□□ -1.99
CTM1	YHR109W	SOD1	P00445	154 aa	Known RBP	2.64	□□□□□ -1.99
CTM1	YHR109W	RPL25	P04456	142 aa	Known RBP	2.64	□□□□□ -1.99
CTM1	YHR109W	CDC7	P06243	507 aa		2.64	□□□□□ -1.99
CTM1	YHR109W	TCA17	P32613	152 aa		2.64	□□□□□ -1.99
CTM1	YHR109W	YKR041W	P36134	250 aa		2.64	□□□□□ -1.99
CTM1	YHR109W	MAK5	P38112	773 aa	Predicted RBP	2.64	□□□□□ -1.99
CTM1	YHR109W	RMD6	P39975	231 aa		2.64	□□□□□ -1.99
CTM1	YHR109W	YGR050C	P53231	118 aa		2.64	□□□□□ -1.99
CTM1	YHR109W	LPP1	Q04396	274 aa		2.64	□□□□□ -1.99
CTM1	YHR109W	ATG39	Q06159	398 aa		2.64	□□□□□ -1.99
CTM1	YHR109W	YET3	Q07451	203 aa		2.64	□□□□□ -1.99
CTM1	YHR109W	YOL024W	Q08172	172 aa		2.64	□□□□□ -1.99
CTM1	YHR109W	LSO2	Q3E772	92 aa	Known RBP	2.64	□□□□□ -1.99
CTM1	YHR109W	HIS3	P06633	220 aa		2.63	□□□□□ -1.99
CTM1	YHR109W	RPS23A	P0CX29	145 aa	Known RBP	2.63	□□□□□ -1.99
CTM1	YHR109W	RPS23B	P0CX30	145 aa		2.63	□□□□□ -1.99
CTM1	YHR109W	TRR1	P29509	319 aa	Known RBP	2.63	□□□□□ -1.99
CTM1	YHR109W	YIL059C	P40520	121 aa		2.63	□□□□□ -1.99
CTM1	YHR109W	PIR5	P46999	287 aa		2.63	□□□□□ -1.99
CTM1	YHR109W	YNL140C	P53910	189 aa		2.63	□□□□□ -1.99
CTM1	YHR109W	ABF2	Q02486	183 aa		2.63	□□□□□ -1.99
CTM1	YHR109W	YPR063C	Q12160	140 aa		2.63	□□□□□ -1.99
CTM1	YHR109W	COS8	P38723	381 aa		2.62	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 128.4 ms