RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C LYS12P40495 371 aaKnown RBP5.1□□□□□ -1.59
SFB3YHR098C IKS1P47042 667 aa5.1□□□□□ -1.59
SFB3YHR098C PDR16P53860 351 aaKnown RBP5.1□□□□□ -1.59
SFB3YHR098C NRG1Q03125 231 aa5.1□□□□□ -1.59
SFB3YHR098C SRL2Q12020 392 aa5.1□□□□□ -1.59
SFB3YHR098C RDL1Q12305 139 aaKnown RBP5.1□□□□□ -1.59
SFB3YHR098C STP22P25604 385 aa5.09□□□□□ -1.59
SFB3YHR098C TRS20P38334 175 aa5.09□□□□□ -1.59
SFB3YHR098C PAU5P43575 122 aa5.09□□□□□ -1.59
SFB3YHR098C BNA2P47125 453 aa5.09□□□□□ -1.59
SFB3YHR098C SAM50P53969 484 aa5.09□□□□□ -1.59
SFB3YHR098C TRM44Q02648 567 aaKnown RBP5.09□□□□□ -1.59
SFB3YHR098C CCE1Q03702 353 aa5.09□□□□□ -1.59
SFB3YHR098C NAT4Q04751 285 aa5.09□□□□□ -1.59
SFB3YHR098C TPO4Q12256 659 aa5.09□□□□□ -1.59
SFB3YHR098C STF1P01098 86 aa5.09□□□□□ -1.6
SFB3YHR098C COX9P07255 59 aa5.09□□□□□ -1.6
SFB3YHR098C TY2A-FP0CX61 438 aa5.09□□□□□ -1.6
SFB3YHR098C TY2A-GR2P0CX62 438 aa5.09□□□□□ -1.6
SFB3YHR098C ERS1P17261 260 aa5.09□□□□□ -1.6
SFB3YHR098C HMT1P38074 348 aa5.09□□□□□ -1.6
SFB3YHR098C FLO5P38894 1075 aa5.09□□□□□ -1.6
SFB3YHR098C AIR1P40507 360 aaKnown RBP5.09□□□□□ -1.6
SFB3YHR098C PHS1P40857 217 aa5.09□□□□□ -1.6
SFB3YHR098C TRM9P49957 279 aa5.09□□□□□ -1.6
SFB3YHR098C SSU72P53538 206 aaPredicted RBP5.09□□□□□ -1.6
SFB3YHR098C HED1Q03937 162 aa5.09□□□□□ -1.6
SFB3YHR098C SUL2Q12325 893 aa5.09□□□□□ -1.6
SFB3YHR098C AHC1Q12433 566 aa5.09□□□□□ -1.6
SFB3YHR098C CPR1P14832 162 aaKnown RBP5.08□□□□□ -1.6
SFB3YHR098C PRY2P36110 329 aa5.08□□□□□ -1.6
SFB3YHR098C ICE2P40499 491 aa5.08□□□□□ -1.6
SFB3YHR098C SCS3P53012 380 aa5.08□□□□□ -1.6
SFB3YHR098C RHO3Q00245 231 aaKnown RBP5.08□□□□□ -1.6
SFB3YHR098C FRE7Q12333 620 aa5.08□□□□□ -1.6
SFB3YHR098C TY2A-LR1P0C2J4 438 aa5.08□□□□□ -1.6
SFB3YHR098C YPR170W-BP0C5R9 85 aa5.08□□□□□ -1.6
SFB3YHR098C RPL1AP0CX43 217 aaKnown RBP5.08□□□□□ -1.6
SFB3YHR098C RPL1BP0CX44 217 aaKnown RBP5.08□□□□□ -1.6
SFB3YHR098C TY2A-CP25383 438 aa5.08□□□□□ -1.6
SFB3YHR098C TKL2P33315 681 aa5.08□□□□□ -1.6
SFB3YHR098C PRP18P33411 251 aaPredicted RBP5.08□□□□□ -1.6
SFB3YHR098C RPL14AP36105 138 aaKnown RBP5.08□□□□□ -1.6
SFB3YHR098C RPL14BP38754 138 aaKnown RBP5.08□□□□□ -1.6
SFB3YHR098C MNL1P38888 796 aa5.08□□□□□ -1.6
SFB3YHR098C IRC22P40006 225 aa5.08□□□□□ -1.6
SFB3YHR098C AZF1P41696 914 aa5.08□□□□□ -1.6
SFB3YHR098C TOS2P50078 622 aa5.08□□□□□ -1.6
SFB3YHR098C YGR017WP53210 297 aa5.08□□□□□ -1.6
SFB3YHR098C YGR066CP53242 292 aa5.08□□□□□ -1.6
SFB3YHR098C TY2A-DR2Q03483 438 aa5.08□□□□□ -1.6
SFB3YHR098C INP1Q03694 420 aa5.08□□□□□ -1.6
SFB3YHR098C ROY1Q04847 553 aa5.08□□□□□ -1.6
SFB3YHR098C ATG39Q06159 398 aa5.08□□□□□ -1.6
SFB3YHR098C TY2A-BQ12260 438 aa5.08□□□□□ -1.6
SFB3YHR098C TY2A-OR2Q12293 438 aa5.08□□□□□ -1.6
SFB3YHR098C TY2A-DR1Q12392 438 aa5.08□□□□□ -1.6
SFB3YHR098C TY2A-OR1Q12439 438 aa5.08□□□□□ -1.6
SFB3YHR098C IZH2Q12442 317 aa5.08□□□□□ -1.6
SFB3YHR098C RAX2Q12465 1220 aa5.08□□□□□ -1.6
SFB3YHR098C TY2A-DR3Q99303 438 aa5.08□□□□□ -1.6
SFB3YHR098C YLR358CO13565 187 aa5.07□□□□□ -1.6
SFB3YHR098C FMT1P32785 401 aa5.07□□□□□ -1.6
SFB3YHR098C PRE3P38624 215 aa5.07□□□□□ -1.6
SFB3YHR098C YEA6P39953 335 aa5.07□□□□□ -1.6
SFB3YHR098C HEM14P40012 539 aa5.07□□□□□ -1.6
SFB3YHR098C DIG2Q03373 323 aaKnown RBP5.07□□□□□ -1.6
SFB3YHR098C ASM4Q05166 528 aa5.07□□□□□ -1.6
SFB3YHR098C TRS65P32893 560 aa5.07□□□□□ -1.6
SFB3YHR098C INM1P38710 295 aa5.07□□□□□ -1.6
SFB3YHR098C TIM17P39515 158 aa5.07□□□□□ -1.6
SFB3YHR098C AVT7P40501 490 aa5.07□□□□□ -1.6
SFB3YHR098C NEO1P40527 1151 aa5.07□□□□□ -1.6
SFB3YHR098C CDC40P40968 455 aaPredicted RBP5.07□□□□□ -1.6
SFB3YHR098C TAZ1Q06510 381 aa5.07□□□□□ -1.6
SFB3YHR098C SNA4Q07549 140 aa5.07□□□□□ -1.6
SFB3YHR098C ERV2Q12284 196 aa5.07□□□□□ -1.6
SFB3YHR098C SAL1D6W196 494 aa5.06□□□□□ -1.6
SFB3YHR098C TDH3P00359 332 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
SFB3YHR098C FUN19P28003 413 aaPredicted RBP5.06□□□□□ -1.6
SFB3YHR098C CWP1P28319 239 aa5.06□□□□□ -1.6
SFB3YHR098C TCA17P32613 152 aa5.06□□□□□ -1.6
SFB3YHR098C UTR5P32630 166 aa5.06□□□□□ -1.6
SFB3YHR098C MRPL16P38064 232 aa5.06□□□□□ -1.6
SFB3YHR098C YBR220CP38318 560 aa5.06□□□□□ -1.6
SFB3YHR098C ZIM17P42844 174 aa5.06□□□□□ -1.6
SFB3YHR098C ATG10Q07879 167 aa5.06□□□□□ -1.6
SFB3YHR098C ISA2Q12425 185 aa5.06□□□□□ -1.6
SFB3YHR098C PET20Q99373 253 aa5.06□□□□□ -1.6
SFB3YHR098C CCH1P50077 2039 aa5.06□□□□□ -1.6
SFB3YHR098C WSS1P38838 269 aa5.06□□□□□ -1.6
SFB3YHR098C ATG27P46989 271 aa5.06□□□□□ -1.6
SFB3YHR098C FLC3P53121 802 aa5.06□□□□□ -1.6
SFB3YHR098C RCE1Q03530 315 aa5.06□□□□□ -1.6
SFB3YHR098C HNT1Q04344 158 aaKnown RBP5.06□□□□□ -1.6
SFB3YHR098C SYM1Q06563 197 aa5.06□□□□□ -1.6
SFB3YHR098C MCH1Q07376 486 aa5.06□□□□□ -1.6
SFB3YHR098C YDL129WQ07555 291 aa5.06□□□□□ -1.6
SFB3YHR098C HRD1Q08109 551 aa5.06□□□□□ -1.6
SFB3YHR098C YOL073CQ08232 322 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms