RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C YPL229WQ99395 206 aa2.36□□□□□ -2.03
MSH4YFL003C YAK1P14680 807 aa2.36□□□□□ -2.03
MSH4YFL003C PCL1P24867 279 aa2.36□□□□□ -2.03
MSH4YFL003C MRH4P53166 561 aa2.36□□□□□ -2.03
MSH4YFL003C PDR17P53844 350 aa2.36□□□□□ -2.03
MSH4YFL003C AAH1P53909 347 aa2.36□□□□□ -2.03
MSH4YFL003C SCW10Q04951 389 aa2.36□□□□□ -2.03
MSH4YFL003C TRM10Q12400 293 aa2.36□□□□□ -2.03
MSH4YFL003C COS2P0CX12 379 aa2.35□□□□□ -2.03
MSH4YFL003C COS3P0CX13 379 aa2.35□□□□□ -2.03
MSH4YFL003C IMP1P28627 190 aa2.35□□□□□ -2.03
MSH4YFL003C UBC6P33296 250 aaPredicted RBP2.35□□□□□ -2.03
MSH4YFL003C HMT1P38074 348 aa2.35□□□□□ -2.03
MSH4YFL003C GRE3P38715 327 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
MSH4YFL003C MTW1P39731 289 aa2.35□□□□□ -2.03
MSH4YFL003C COS4P43542 379 aa2.35□□□□□ -2.03
MSH4YFL003C YNL046WP53956 172 aa2.35□□□□□ -2.03
MSH4YFL003C MRPS16Q02608 121 aa2.35□□□□□ -2.03
MSH4YFL003C RRP40Q08285 240 aaKnown RBP2.35□□□□□ -2.03
MSH4YFL003C YNG1Q08465 219 aa2.35□□□□□ -2.03
MSH4YFL003C YOR186WQ08560 144 aa2.35□□□□□ -2.03
MSH4YFL003C MRX4Q12467 430 aa2.35□□□□□ -2.03
MSH4YFL003C YAL067W-AQ8TGK6 75 aa2.35□□□□□ -2.03
MSH4YFL003C ERD2P18414 219 aa2.35□□□□□ -2.03
MSH4YFL003C CAT2P32796 670 aaKnown RBP2.35□□□□□ -2.03
MSH4YFL003C MRPL39P36533 70 aa2.35□□□□□ -2.03
MSH4YFL003C FES1P38260 290 aa2.35□□□□□ -2.03
MSH4YFL003C GGC1P38988 300 aa2.35□□□□□ -2.03
MSH4YFL003C COG3P40094 801 aa2.35□□□□□ -2.03
MSH4YFL003C YMR144WP40214 342 aaKnown RBP2.35□□□□□ -2.03
MSH4YFL003C MMS2P53152 137 aa2.35□□□□□ -2.03
MSH4YFL003C SLX9P53251 210 aaPredicted RBP2.35□□□□□ -2.03
MSH4YFL003C RPL21AQ02753 160 aaKnown RBP2.35□□□□□ -2.03
MSH4YFL003C PRM15Q03262 622 aa2.35□□□□□ -2.03
MSH4YFL003C VHS1Q03785 461 aa2.35□□□□□ -2.03
MSH4YFL003C YET3Q07451 203 aa2.35□□□□□ -2.03
MSH4YFL003C LDB16P25587 256 aa2.34□□□□□ -2.03
MSH4YFL003C API2Q04413 109 aa2.34□□□□□ -2.03
MSH4YFL003C SYC1Q08553 188 aaPredicted RBP2.34□□□□□ -2.03
MSH4YFL003C HKR1P41809 1802 aa2.34□□□□□ -2.04
MSH4YFL003C COX10P21592 462 aa2.34□□□□□ -2.04
MSH4YFL003C DBF2P22204 572 aa2.34□□□□□ -2.04
MSH4YFL003C SPS18P32572 300 aa2.34□□□□□ -2.04
MSH4YFL003C SHG1P38337 142 aa2.34□□□□□ -2.04
MSH4YFL003C YER121WP40076 114 aa2.34□□□□□ -2.04
MSH4YFL003C SDT1P53078 280 aa2.34□□□□□ -2.04
MSH4YFL003C SSU72P53538 206 aaPredicted RBP2.34□□□□□ -2.04
MSH4YFL003C YNL140CP53910 189 aa2.34□□□□□ -2.04
MSH4YFL003C YMR279CQ03263 540 aa2.34□□□□□ -2.04
MSH4YFL003C INP1Q03694 420 aa2.34□□□□□ -2.04
MSH4YFL003C YPL150WQ12152 901 aa2.34□□□□□ -2.04
MSH4YFL003C YOL163WP0CF20 169 aa2.33□□□□□ -2.04
MSH4YFL003C ACP1P32463 125 aa2.33□□□□□ -2.04
MSH4YFL003C UTH1P36135 365 aa2.33□□□□□ -2.04
MSH4YFL003C MRPL28P36527 147 aa2.33□□□□□ -2.04
MSH4YFL003C YIL012WP40551 113 aa2.33□□□□□ -2.04
MSH4YFL003C YGL034CP53186 121 aa2.33□□□□□ -2.04
MSH4YFL003C YGR067CP53243 804 aa2.33□□□□□ -2.04
MSH4YFL003C CDC28P00546 298 aaKnown RBP2.33□□□□□ -2.04
MSH4YFL003C YHI9P38765 294 aa2.33□□□□□ -2.04
MSH4YFL003C SNO1Q03144 224 aa2.33□□□□□ -2.04
MSH4YFL003C USB1Q12208 290 aaKnown RBP2.33□□□□□ -2.04
MSH4YFL003C COX5AP00424 153 aa2.32□□□□□ -2.04
MSH4YFL003C GCN3P14741 305 aa2.32□□□□□ -2.04
MSH4YFL003C HSP26P15992 214 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
MSH4YFL003C SRP14P38985 146 aa2.32□□□□□ -2.04
MSH4YFL003C AVT6P40074 448 aa2.32□□□□□ -2.04
MSH4YFL003C MIC19P43594 170 aa2.32□□□□□ -2.04
MSH4YFL003C BXI1P48558 297 aa2.32□□□□□ -2.04
MSH4YFL003C SOD1P00445 154 aaKnown RBP2.32□□□□□ -2.04
MSH4YFL003C ERG2P32352 222 aa2.32□□□□□ -2.04
MSH4YFL003C ZRT3P34240 503 aa2.32□□□□□ -2.04
MSH4YFL003C AME1P38313 324 aa2.32□□□□□ -2.04
MSH4YFL003C PHO89P38361 574 aa2.32□□□□□ -2.04
MSH4YFL003C RRT13P40042 185 aa2.32□□□□□ -2.04
MSH4YFL003C PEX17P40155 199 aa2.32□□□□□ -2.04
MSH4YFL003C YJL016WP47072 561 aa2.32□□□□□ -2.04
MSH4YFL003C TMA22P47089 198 aaPredicted RBP2.32□□□□□ -2.04
MSH4YFL003C YJR056CP47115 236 aa2.32□□□□□ -2.04
MSH4YFL003C YLR460CP54007 376 aa2.32□□□□□ -2.04
MSH4YFL003C YDR124WQ04608 324 aa2.32□□□□□ -2.04
MSH4YFL003C YOL029CQ08187 201 aa2.32□□□□□ -2.04
MSH4YFL003C MSA1Q08471 629 aa2.32□□□□□ -2.04
MSH4YFL003C DFM1Q12743 341 aaKnown RBP2.32□□□□□ -2.04
MSH4YFL003C CKA2P19454 339 aa2.31□□□□□ -2.04
MSH4YFL003C TRR1P29509 319 aaKnown RBP2.31□□□□□ -2.04
MSH4YFL003C OAC1P32332 324 aa2.31□□□□□ -2.04
MSH4YFL003C CSG2P35206 410 aa2.31□□□□□ -2.04
MSH4YFL003C CAF4P36130 643 aa2.31□□□□□ -2.04
MSH4YFL003C YKE4P40544 346 aa2.31□□□□□ -2.04
MSH4YFL003C JAC1P53193 184 aa2.31□□□□□ -2.04
MSH4YFL003C NRK1P53915 240 aa2.31□□□□□ -2.04
MSH4YFL003C HAL1Q01766 294 aa2.31□□□□□ -2.04
MSH4YFL003C GOT1Q03554 138 aa2.31□□□□□ -2.04
MSH4YFL003C AGC1Q12482 902 aa2.31□□□□□ -2.04
MSH4YFL003C LYS2P07702 1392 aa2.31□□□□□ -2.04
MSH4YFL003C CBP6P07253 162 aaPredicted RBP2.31□□□□□ -2.04
MSH4YFL003C PUT1P09368 476 aa2.31□□□□□ -2.04
MSH4YFL003C ECM33P38248 429 aaKnown RBP2.31□□□□□ -2.04
MSH4YFL003C ARN2P38724 620 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms