RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP3	YER151C	CDC33	P07260	213 aa	Known RBP	0.71	□□□□□ -2.3
UBP3	YER151C	PUT1	P09368	476 aa		0.71	□□□□□ -2.3
UBP3	YER151C	PHO13	P19881	312 aa		0.71	□□□□□ -2.3
UBP3	YER151C	RAD14	P28519	371 aa		0.71	□□□□□ -2.3
UBP3	YER151C	APE2	P32454	952 aa	Known RBP	0.71	□□□□□ -2.3
UBP3	YER151C	PPQ1	P32945	549 aa		0.71	□□□□□ -2.3
UBP3	YER151C	UTP30	P36144	274 aa	Known RBP	0.71	□□□□□ -2.3
UBP3	YER151C	MIX23	P38162	196 aa		0.71	□□□□□ -2.3
UBP3	YER151C	TAE1	P38340	232 aa		0.71	□□□□□ -2.3
UBP3	YER151C	SMB1	P40018	196 aa	Known RBP	0.71	□□□□□ -2.3
UBP3	YER151C	REE1	P40893	198 aa		0.71	□□□□□ -2.3
UBP3	YER151C	MOB2	P43563	287 aa		0.71	□□□□□ -2.3
UBP3	YER151C	YNR048W	P53740	393 aa		0.71	□□□□□ -2.3
UBP3	YER151C	COX12	Q01519	83 aa		0.71	□□□□□ -2.3
UBP3	YER151C	KAP120	Q02932	1032 aa		0.71	□□□□□ -2.3
UBP3	YER151C	BET5	Q03630	159 aa		0.71	□□□□□ -2.3
UBP3	YER151C	RRG7	Q08774	242 aa	Predicted RBP	0.71	□□□□□ -2.3
UBP3	YER151C	SLF1	Q12034	447 aa	Known RBP	0.71	□□□□□ -2.3
UBP3	YER151C	RFM1	Q12192	310 aa		0.71	□□□□□ -2.3
UBP3	YER151C	OCA6	Q12454	224 aa		0.71	□□□□□ -2.3
UBP3	YER151C	RPC40	P07703	335 aa	Known RBP	0.7	□□□□□ -2.3
UBP3	YER151C	YCL068C	P25593	260 aa		0.7	□□□□□ -2.3
UBP3	YER151C	YCR100C	P25606	316 aa		0.7	□□□□□ -2.3
UBP3	YER151C	CDC50	P25656	391 aa		0.7	□□□□□ -2.3
UBP3	YER151C	MIG1	P27705	504 aa		0.7	□□□□□ -2.3
UBP3	YER151C	ERG2	P32352	222 aa		0.7	□□□□□ -2.3
UBP3	YER151C	PRP21	P32524	280 aa	Predicted RBP	0.7	□□□□□ -2.3
UBP3	YER151C	ECT1	P33412	323 aa		0.7	□□□□□ -2.3
UBP3	YER151C	YBR285W	P38354	144 aa		0.7	□□□□□ -2.3
UBP3	YER151C	ECM34	P38728	170 aa		0.7	□□□□□ -2.3
UBP3	YER151C	YHR177W	P38867	453 aa		0.7	□□□□□ -2.3
UBP3	YER151C	BDH1	P39714	382 aa		0.7	□□□□□ -2.3
UBP3	YER151C	DLS1	P40366	167 aa		0.7	□□□□□ -2.3
UBP3	YER151C	PFS2	P42841	465 aa	Known RBP	0.7	□□□□□ -2.3
UBP3	YER151C	VPS55	P47111	140 aa		0.7	□□□□□ -2.3
UBP3	YER151C	SPG1	P50088	95 aa		0.7	□□□□□ -2.3
UBP3	YER151C	ARO8	P53090	500 aa	Known RBP	0.7	□□□□□ -2.3
UBP3	YER151C	CAF40	P53829	373 aa		0.7	□□□□□ -2.3
UBP3	YER151C	COG5	P53951	403 aa		0.7	□□□□□ -2.3
UBP3	YER151C	YDR248C	Q03786	193 aa		0.7	□□□□□ -2.3
UBP3	YER151C	PBA1	Q05778	276 aa		0.7	□□□□□ -2.3
UBP3	YER151C	LOA1	Q06508	300 aa		0.7	□□□□□ -2.3
UBP3	YER151C	PBP4	Q07362	185 aa	Known RBP	0.7	□□□□□ -2.3
UBP3	YER151C	CSI2	Q08054	341 aa		0.7	□□□□□ -2.3
UBP3	YER151C	NSL1	Q12143	216 aa		0.7	□□□□□ -2.3
UBP3	YER151C	YPR117W	Q06116	2489 aa		0.7	□□□□□ -2.3
UBP3	YER151C	SEC53	P07283	254 aa	Known RBP	0.7	□□□□□ -2.3
UBP3	YER151C	HSC82	P15108	705 aa	Known RBP	0.7	□□□□□ -2.3
UBP3	YER151C	MER1	P16523	270 aa		0.7	□□□□□ -2.3
UBP3	YER151C	YCR090C	P25654	182 aa	Known RBP	0.7	□□□□□ -2.3
UBP3	YER151C	RFA3	P26755	122 aa	Known RBP	0.7	□□□□□ -2.3
UBP3	YER151C	IMP1	P28627	190 aa		0.7	□□□□□ -2.3
UBP3	YER151C	CAT2	P32796	670 aa	Known RBP	0.7	□□□□□ -2.3
UBP3	YER151C	LTV1	P34078	463 aa		0.7	□□□□□ -2.3
UBP3	YER151C	UTP11	P34247	250 aa	Predicted RBP	0.7	□□□□□ -2.3
UBP3	YER151C	RPS27A	P35997	82 aa	Known RBP	0.7	□□□□□ -2.3
UBP3	YER151C	RPS27B	P38711	82 aa		0.7	□□□□□ -2.3
UBP3	YER151C	TCD1	P38756	429 aa		0.7	□□□□□ -2.3
UBP3	YER151C	MTW1	P39731	289 aa		0.7	□□□□□ -2.3
UBP3	YER151C	SAS2	P40963	338 aa		0.7	□□□□□ -2.3
UBP3	YER151C	YNL320W	P42840	284 aa		0.7	□□□□□ -2.3
UBP3	YER151C	TDA4	P47153	279 aa		0.7	□□□□□ -2.3
UBP3	YER151C	YJR141W	P47172	347 aa	Predicted RBP	0.7	□□□□□ -2.3
UBP3	YER151C	ALG13	P53178	202 aa		0.7	□□□□□ -2.3
UBP3	YER151C	SCS7	Q03529	384 aa		0.7	□□□□□ -2.3
UBP3	YER151C	AIM36	Q03798	255 aa		0.7	□□□□□ -2.3
UBP3	YER151C	FIN1	Q03898	291 aa		0.7	□□□□□ -2.3
UBP3	YER151C	MRX8	Q05473	314 aa		0.7	□□□□□ -2.3
UBP3	YER151C	YDR286C	Q05530	114 aa		0.7	□□□□□ -2.3
UBP3	YER151C	NKP2	Q06162	153 aa		0.7	□□□□□ -2.3
UBP3	YER151C	SYC1	Q08553	188 aa	Predicted RBP	0.7	□□□□□ -2.3
UBP3	YER151C	RTC5	Q12108	567 aa	Known RBP	0.7	□□□□□ -2.3
UBP3	YER151C	YRA1	Q12159	226 aa	Known RBP	0.7	□□□□□ -2.3
UBP3	YER151C	TFC7	Q12415	435 aa		0.7	□□□□□ -2.3
UBP3	YER151C	HUT1	Q12520	339 aa		0.7	□□□□□ -2.3
UBP3	YER151C	RGS2	Q99188	309 aa		0.7	□□□□□ -2.3
UBP3	YER151C	PDE2	P06776	526 aa		0.69	□□□□□ -2.3
UBP3	YER151C	RAD7	P06779	565 aa		0.69	□□□□□ -2.3
UBP3	YER151C	NFT1	P0CE68	1218 aa		0.69	□□□□□ -2.3
UBP3	YER151C	RPL2A	P0CX45	254 aa	Known RBP	0.69	□□□□□ -2.3
UBP3	YER151C	RPL2B	P0CX46	254 aa	Known RBP	0.69	□□□□□ -2.3
UBP3	YER151C	MATALPHA1	P0CY06	175 aa		0.69	□□□□□ -2.3
UBP3	YER151C	HMLALPHA1	P0CY07	175 aa		0.69	□□□□□ -2.3
UBP3	YER151C	URA10	P30402	227 aa		0.69	□□□□□ -2.3
UBP3	YER151C	PRP18	P33411	251 aa	Predicted RBP	0.69	□□□□□ -2.3
UBP3	YER151C	ZTA1	P38230	334 aa	Known RBP	0.69	□□□□□ -2.3
UBP3	YER151C	FZO1	P38297	855 aa		0.69	□□□□□ -2.3
UBP3	YER151C	MST28	P39552	234 aa		0.69	□□□□□ -2.3
UBP3	YER151C	IRC22	P40006	225 aa		0.69	□□□□□ -2.3
UBP3	YER151C	PAC10	P48363	199 aa		0.69	□□□□□ -2.3
UBP3	YER151C	POP6	P53218	158 aa		0.69	□□□□□ -2.3
UBP3	YER151C	YNR064C	P53750	290 aa		0.69	□□□□□ -2.3
UBP3	YER151C	NOP6	Q07623	225 aa	Known RBP	0.69	□□□□□ -2.3
UBP3	YER151C	SPC3	Q12133	184 aa		0.69	□□□□□ -2.3
UBP3	YER151C	EMP46	Q12396	444 aa		0.69	□□□□□ -2.3
UBP3	YER151C	SCS22	Q6Q595	175 aa		0.69	□□□□□ -2.3
UBP3	YER151C	TRP1	P00912	224 aa		0.69	□□□□□ -2.3
UBP3	YER151C	RHO2	P06781	192 aa		0.69	□□□□□ -2.3
UBP3	YER151C	RPL12A	P0CX53	165 aa	Known RBP	0.69	□□□□□ -2.3
UBP3	YER151C	RPL12B	P0CX54	165 aa		0.69	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 133.3 ms