RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C MPA43P53583 542 aaPredicted RBP2.84□□□□□ -1.96
CDC40YDR364C MNT4P53745 580 aa2.84□□□□□ -1.96
CDC40YDR364C YNR062CP53748 327 aa2.84□□□□□ -1.96
CDC40YDR364C PGA1P53896 198 aa2.84□□□□□ -1.96
CDC40YDR364C OST6Q03723 332 aa2.84□□□□□ -1.96
CDC40YDR364C YMR254CQ04838 102 aa2.84□□□□□ -1.96
CDC40YDR364C PAL1Q05518 499 aaKnown RBP2.84□□□□□ -1.96
CDC40YDR364C SEI1Q06058 285 aa2.84□□□□□ -1.96
CDC40YDR364C BER1Q06688 274 aaKnown RBP2.84□□□□□ -1.96
CDC40YDR364C NDE2Q07500 545 aa2.84□□□□□ -1.96
CDC40YDR364C RAX1Q08760 435 aa2.84□□□□□ -1.96
CDC40YDR364C YDL109CQ12103 647 aa2.84□□□□□ -1.96
CDC40YDR364C YOR029WQ12243 111 aa2.84□□□□□ -1.96
CDC40YDR364C YMR230W-AQ3E7B5 62 aa2.84□□□□□ -1.96
CDC40YDR364C ERD1P16151 362 aa2.83□□□□□ -1.96
CDC40YDR364C PHO80P20052 293 aa2.83□□□□□ -1.96
CDC40YDR364C RAD51P25454 400 aa2.83□□□□□ -1.96
CDC40YDR364C SHE1P38200 338 aa2.83□□□□□ -1.96
CDC40YDR364C MTC4P38335 694 aaKnown RBP2.83□□□□□ -1.96
CDC40YDR364C YHR180WP38868 163 aa2.83□□□□□ -1.96
CDC40YDR364C YIL169CP40442 995 aa2.83□□□□□ -1.96
CDC40YDR364C DFG10P40526 253 aa2.83□□□□□ -1.96
CDC40YDR364C CUP9P41817 306 aa2.83□□□□□ -1.96
CDC40YDR364C PFS2P42841 465 aaKnown RBP2.83□□□□□ -1.96
CDC40YDR364C STB1P42845 420 aa2.83□□□□□ -1.96
CDC40YDR364C YGR210CP42942 411 aa2.83□□□□□ -1.96
CDC40YDR364C ATG18P43601 500 aa2.83□□□□□ -1.96
CDC40YDR364C ABM1P47146 123 aa2.83□□□□□ -1.96
CDC40YDR364C CWC23P52868 283 aaPredicted RBP2.83□□□□□ -1.96
CDC40YDR364C MKC7P53379 596 aa2.83□□□□□ -1.96
CDC40YDR364C CAF40P53829 373 aa2.83□□□□□ -1.96
CDC40YDR364C GPI17Q04080 534 aa2.83□□□□□ -1.96
CDC40YDR364C GTO3Q04806 366 aa2.83□□□□□ -1.96
CDC40YDR364C YPR127WQ06494 345 aa2.83□□□□□ -1.96
CDC40YDR364C YOR376WQ08900 122 aa2.83□□□□□ -1.96
CDC40YDR364C POM33Q12164 279 aa2.83□□□□□ -1.96
CDC40YDR364C YLR108CQ12259 485 aa2.83□□□□□ -1.96
CDC40YDR364C YOS9Q99220 542 aa2.83□□□□□ -1.96
CDC40YDR364C CDC36P06100 191 aaPredicted RBP2.82□□□□□ -1.96
CDC40YDR364C RPL40AP0CH08 128 aaKnown RBP2.82□□□□□ -1.96
CDC40YDR364C RPL40BP0CH09 128 aaKnown RBP2.82□□□□□ -1.96
CDC40YDR364C GIT1P25346 518 aa2.82□□□□□ -1.96
CDC40YDR364C MDH3P32419 343 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
CDC40YDR364C HSP150P32478 413 aa2.82□□□□□ -1.96
CDC40YDR364C YBR063CP38083 404 aa2.82□□□□□ -1.96
CDC40YDR364C MAL32P38158 584 aa2.82□□□□□ -1.96
CDC40YDR364C COX14P39103 70 aa2.82□□□□□ -1.96
CDC40YDR364C YJL218WP40892 196 aaKnown RBP2.82□□□□□ -1.96
CDC40YDR364C OST1P41543 476 aaKnown RBP2.82□□□□□ -1.96
CDC40YDR364C YFR054CP43622 192 aa2.82□□□□□ -1.96
CDC40YDR364C YGL235WP53071 178 aa2.82□□□□□ -1.96
CDC40YDR364C OKP1P53298 406 aa2.82□□□□□ -1.96
CDC40YDR364C MAL12P53341 584 aa2.82□□□□□ -1.96
CDC40YDR364C PAU12P53343 120 aa2.82□□□□□ -1.96
CDC40YDR364C MRPL50P53724 139 aa2.82□□□□□ -1.96
CDC40YDR364C HCH1P53834 153 aa2.82□□□□□ -1.96
CDC40YDR364C YMR181CQ03231 154 aa2.82□□□□□ -1.96
CDC40YDR364C YMR315WQ04869 349 aaKnown RBP2.82□□□□□ -1.96
CDC40YDR364C DCR2Q05924 578 aa2.82□□□□□ -1.96
CDC40YDR364C PAM18Q07914 168 aa2.82□□□□□ -1.96
CDC40YDR364C COQ10Q08058 207 aa2.82□□□□□ -1.96
CDC40YDR364C HRT1Q08273 121 aa2.82□□□□□ -1.96
CDC40YDR364C YOR289WQ12012 251 aaPredicted RBP2.82□□□□□ -1.96
CDC40YDR364C AKR2Q12013 749 aa2.82□□□□□ -1.96
CDC40YDR364C YIL046W-AQ3E7Z4 54 aa2.82□□□□□ -1.96
CDC40YDR364C SUS1Q6WNK7 96 aa2.82□□□□□ -1.96
CDC40YDR364C YEL009C-AA0A023PZF2 135 aa2.81□□□□□ -1.96
CDC40YDR364C ADH2P00331 348 aaKnown RBP2.81□□□□□ -1.96
CDC40YDR364C COX2P00410 251 aa2.81□□□□□ -1.96
CDC40YDR364C SIR2P06700 562 aa2.81□□□□□ -1.96
CDC40YDR364C PRE7P23724 241 aaKnown RBP2.81□□□□□ -1.96
CDC40YDR364C AHC2P25649 128 aa2.81□□□□□ -1.96
CDC40YDR364C ERG9P29704 444 aa2.81□□□□□ -1.96
CDC40YDR364C GPX1P36014 167 aa2.81□□□□□ -1.96
CDC40YDR364C IPI1P38803 334 aaPredicted RBP2.81□□□□□ -1.96
CDC40YDR364C FCY21P40039 528 aa2.81□□□□□ -1.96
CDC40YDR364C YNL208WP40159 199 aaKnown RBP2.81□□□□□ -1.96
CDC40YDR364C OTU1P43558 301 aa2.81□□□□□ -1.96
CDC40YDR364C YAE1P47118 141 aaPredicted RBP2.81□□□□□ -1.96
CDC40YDR364C YKR005CQ02203 525 aa2.81□□□□□ -1.96
CDC40YDR364C ADH6Q04894 360 aaKnown RBP2.81□□□□□ -1.96
CDC40YDR364C TAZ1Q06510 381 aa2.81□□□□□ -1.96
CDC40YDR364C ASR1Q06834 288 aa2.81□□□□□ -1.96
CDC40YDR364C IRC19Q07843 230 aa2.81□□□□□ -1.96
CDC40YDR364C THP3Q12049 470 aaKnown RBP2.81□□□□□ -1.96
CDC40YDR364C MCP1Q12106 302 aa2.81□□□□□ -1.96
CDC40YDR364C ATG31Q12421 196 aa2.81□□□□□ -1.96
CDC40YDR364C HTZ1Q12692 134 aaKnown RBP2.81□□□□□ -1.96
CDC40YDR364C YCR024C-BQ3E7Z8 88 aa2.81□□□□□ -1.96
CDC40YDR364C UBR1P19812 1950 aa2.81□□□□□ -1.96
CDC40YDR364C CUP1-1P0CX80 61 aa2.8□□□□□ -1.96
CDC40YDR364C CUP1-2P0CX81 61 aa2.8□□□□□ -1.96
CDC40YDR364C PPA2P28239 310 aa2.8□□□□□ -1.96
CDC40YDR364C ZRT3P34240 503 aa2.8□□□□□ -1.96
CDC40YDR364C SHE2P36068 246 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
CDC40YDR364C NAT2P37293 288 aa2.8□□□□□ -1.96
CDC40YDR364C PAU24P38155 120 aa2.8□□□□□ -1.96
CDC40YDR364C YBR137WP38276 179 aa2.8□□□□□ -1.96
CDC40YDR364C MBA1P38300 278 aa2.8□□□□□ -1.96
CDC40YDR364C GRE3P38715 327 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms