RNA–Protein interactions for RNA: YDR029W

YDR029W, Transcript of Dubious open reading frame, yeast

Gene YDR029W, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR029W	YDR029W	POL30	P15873	258 aa	Known RBP	0.91	□□□□□ -2.26
YDR029W	YDR029W	YBR063C	P38083	404 aa		0.91	□□□□□ -2.26
YDR029W	YDR029W	YHR127W	P38833	243 aa	Known RBP	0.91	□□□□□ -2.26
YDR029W	YDR029W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	0.91	□□□□□ -2.26	not detected
YDR029W	YDR029W	RPL37A	P49166	88 aa	Known RBP	0.91	□□□□□ -2.26
YDR029W	YDR029W	RHO3	Q00245	231 aa	Known RBP	0.91	□□□□□ -2.26
YDR029W	YDR029W	ABF2	Q02486	183 aa		0.91	□□□□□ -2.26
YDR029W	YDR029W	RPS5	P26783	225 aa	Known RBP	0.9	□□□□□ -2.27
YDR029W	YDR029W	YKL075C	P36083	450 aa		0.9	□□□□□ -2.27
YDR029W	YDR029W	CAT5	P41735	233 aa		0.9	□□□□□ -2.27
YDR029W	YDR029W	SSQ1	Q05931	657 aa	Predicted RBP	0.9	□□□□□ -2.27
YDR029W	YDR029W	PSF1	Q12488	208 aa		0.9	□□□□□ -2.27
YDR029W	YDR029W	VPS21	P36017	210 aa	Known RBP	0.89	□□□□□ -2.27
YDR029W	YDR029W	GAA1	P39012	614 aa		0.89	□□□□□ -2.27
YDR029W	YDR029W	MEP1	P40260	492 aa		0.89	□□□□□ -2.27
YDR029W	YDR029W	MSA1	Q08471	629 aa		0.89	□□□□□ -2.27
YDR029W	YDR029W	BIG1	P38813	335 aa		0.88	□□□□□ -2.27
YDR029W	YDR029W	YRB2	P40517	327 aa		0.88	□□□□□ -2.27
YDR029W	YDR029W	DOC1	P53068	250 aa		0.88	□□□□□ -2.27
YDR029W	YDR029W	MPP6	P53725	186 aa	Predicted RBP	0.88	□□□□□ -2.27
YDR029W	YDR029W	YML096W	Q04489	525 aa		0.88	□□□□□ -2.27
YDR029W	YDR029W	SDO1	Q07953	250 aa	Known RBP	0.88	□□□□□ -2.27
YDR029W	YDR029W	YPL229W	Q99395	206 aa		0.88	□□□□□ -2.27
YDR029W	YDR029W	TVP38	P36164	337 aa		0.87	□□□□□ -2.27
YDR029W	YDR029W	RIO2	P40160	425 aa	Known RBP	0.87	□□□□□ -2.27
YDR029W	YDR029W	AIF1	P52923	378 aa		0.87	□□□□□ -2.27
YDR029W	YDR029W	SAY1	P53324	424 aa		0.87	□□□□□ -2.27
YDR029W	YDR029W	CUS2	P53830	285 aa	Predicted RBP	0.87	□□□□□ -2.27
YDR029W	YDR029W	DID2	P69771	204 aa		0.87	□□□□□ -2.27
YDR029W	YDR029W	YMR007W	Q03675	126 aa		0.87	□□□□□ -2.27
YDR029W	YDR029W	TRM12	Q04235	462 aa		0.87	□□□□□ -2.27
YDR029W	YDR029W	SPG3	Q04398	127 aa	Predicted RBP	0.87	□□□□□ -2.27
YDR029W	YDR029W	YMR144W	P40214	342 aa	Known RBP	0.86	□□□□□ -2.27
YDR029W	YDR029W	YNL010W	P53981	241 aa	Known RBP	0.86	□□□□□ -2.27
YDR029W	YDR029W	MET5	P47169	1442 aa		0.86	□□□□□ -2.27
YDR029W	YDR029W	MSF1	P08425	469 aa		0.85	□□□□□ -2.27
YDR029W	YDR029W	TFC1	P32367	649 aa		0.85	□□□□□ -2.27
YDR029W	YDR029W	MRPL37	P36532	105 aa		0.85	□□□□□ -2.27
YDR029W	YDR029W	YEL067C	P39978	195 aa		0.85	□□□□□ -2.27
YDR029W	YDR029W	YML108W	Q03759	105 aa		0.85	□□□□□ -2.27
YDR029W	YDR029W	BTS1	Q12051	335 aa		0.85	□□□□□ -2.27
YDR029W	YDR029W	YDL180W	Q12301	547 aa		0.85	□□□□□ -2.27
YDR029W	YDR029W	MSB2	P32334	1306 aa		0.85	□□□□□ -2.27
YDR029W	YDR029W	REP2	P03872	296 aa		0.84	□□□□□ -2.27
YDR029W	YDR029W	YET1	P35723	206 aa		0.84	□□□□□ -2.27
YDR029W	YDR029W	RIB1	P38066	345 aa		0.84	□□□□□ -2.27
YDR029W	YDR029W	HUA1	P40325	198 aa		0.84	□□□□□ -2.27
YDR029W	YDR029W	RPL37B	P51402	88 aa	Known RBP	0.84	□□□□□ -2.27
YDR029W	YDR029W	MSH5	Q12175	901 aa		0.84	□□□□□ -2.27
YDR029W	YDR029W	YNL146C-A	Q3E7Z1	64 aa		0.84	□□□□□ -2.27
YDR029W	YDR029W	MRPS28	P21771	286 aa		0.83	□□□□□ -2.28
YDR029W	YDR029W	ERJ5	P43613	295 aa	Predicted RBP	0.83	□□□□□ -2.28
YDR029W	YDR029W	POP3	P53833	195 aa	Predicted RBP	0.83	□□□□□ -2.28
YDR029W	YDR029W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.83	□□□□□ -2.28	not detected
YDR029W	YDR029W	YHR139C-A	O13536	103 aa		0.82	□□□□□ -2.28
YDR029W	YDR029W	AQY2	P0CD90	149 aa		0.82	□□□□□ -2.28
YDR029W	YDR029W	UMP1	P38293	148 aa		0.82	□□□□□ -2.28
YDR029W	YDR029W	PDR18	P53756	1333 aa		0.82	□□□□□ -2.28
YDR029W	YDR029W	PBN1	P25580	416 aa		0.81	□□□□□ -2.28
YDR029W	YDR029W	IRC22	P40006	225 aa		0.81	□□□□□ -2.28
YDR029W	YDR029W	YMD8	Q03697	442 aa		0.81	□□□□□ -2.28
YDR029W	YDR029W	AIM36	Q03798	255 aa		0.81	□□□□□ -2.28
YDR029W	YDR029W	YLR126C	Q12288	251 aa		0.81	□□□□□ -2.28
YDR029W	YDR029W	YPR170W-B	P0C5R9	85 aa		0.8	□□□□□ -2.28
YDR029W	YDR029W	NSP1	P14907	823 aa	Known RBP	0.8	□□□□□ -2.28
YDR029W	YDR029W	PEX17	P40155	199 aa		0.8	□□□□□ -2.28
YDR029W	YDR029W	YNR077C	P53758	84 aa		0.8	□□□□□ -2.28
YDR029W	YDR029W	LSO2	Q3E772	92 aa	Known RBP	0.8	□□□□□ -2.28
YDR029W	YDR029W	OM45	P16547	393 aa		0.79	□□□□□ -2.28
YDR029W	YDR029W	SNC2	P33328	115 aa		0.79	□□□□□ -2.28
YDR029W	YDR029W	YBR209W	P38311	105 aa		0.79	□□□□□ -2.28
YDR029W	YDR029W	HOC1	P47124	396 aa		0.79	□□□□□ -2.28
YDR029W	YDR029W	MCM22	P47167	239 aa		0.79	□□□□□ -2.28
YDR029W	YDR029W	YJR149W	P47177	404 aa		0.79	□□□□□ -2.28
YDR029W	YDR029W	SRB4	P32569	687 aa		0.78	□□□□□ -2.28
YDR029W	YDR029W	FSF1	Q12029	327 aa	Known RBP	0.78	□□□□□ -2.28
YDR029W	YDR029W	ATG22	P25568	528 aa		0.77	□□□□□ -2.29
YDR029W	YDR029W	POP4	P38336	279 aa		0.77	□□□□□ -2.29
YDR029W	YDR029W	URA8	P38627	578 aa	Predicted RBP	0.77	□□□□□ -2.29
YDR029W	YDR029W	DOG2	P38773	246 aa		0.77	□□□□□ -2.29
YDR029W	YDR029W	SOK1	P40317	901 aa		0.77	□□□□□ -2.29
YDR029W	YDR029W	YAE1	P47118	141 aa	Predicted RBP	0.77	□□□□□ -2.29
YDR029W	YDR029W	KNH1	P50112	268 aa		0.77	□□□□□ -2.29
YDR029W	YDR029W	SWP1	Q02795	286 aa		0.77	□□□□□ -2.29
YDR029W	YDR029W	GAS3	Q03655	524 aa		0.77	□□□□□ -2.29
YDR029W	YDR029W	YDR248C	Q03786	193 aa		0.77	□□□□□ -2.29
YDR029W	YDR029W	LPP1	Q04396	274 aa		0.77	□□□□□ -2.29
YDR029W	YDR029W	SRY1	P36007	326 aa		0.76	□□□□□ -2.29
YDR029W	YDR029W	EDC3	P39998	551 aa	Known RBP	0.76	□□□□□ -2.29
YDR029W	YDR029W	SNZ1	Q03148	297 aa		0.76	□□□□□ -2.29
YDR029W	YDR029W	KRE28	Q04431	385 aa		0.76	□□□□□ -2.29
YDR029W	YDR029W	TSC3	Q3E790	80 aa		0.76	□□□□□ -2.29
YDR029W	YDR029W	YLR156W	P0CE96	114 aa		0.75	□□□□□ -2.29
YDR029W	YDR029W	YLR159W	P0CE97	114 aa		0.75	□□□□□ -2.29
YDR029W	YDR029W	YLR161W	P0CE98	114 aa		0.75	□□□□□ -2.29
YDR029W	YDR029W	TCP1	P12612	559 aa	Known RBP	0.75	□□□□□ -2.29
YDR029W	YDR029W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.75	□□□□□ -2.29	not detected
YDR029W	YDR029W	MRPL28	P36527	147 aa		0.75	□□□□□ -2.29
YDR029W	YDR029W	MRPL17	P36528	281 aa		0.75	□□□□□ -2.29
YDR029W	YDR029W	FLX1	P40464	311 aa		0.75	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms